RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 AAMPQ13685 434 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP16-205ENST00000474835 TBC1D32Q96NH3 1257 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 PLCH2O75038 1416 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 FAM161AQ3B820 660 aa5.42□□□□□ -1.54
USP16-205ENST00000474835 FAM208AQ9UK61 1670 aaKnown RBP5.42□□□□□ -1.54
USP16-205ENST00000474835 FRAT2O75474 233 aaPredicted RBP5.42□□□□□ -1.54
USP16-205ENST00000474835 TOPAZ1Q8N9V7 1692 aa5.42□□□□□ -1.54
USP16-205ENST00000474835 VGFO15240 615 aaPredicted RBP5.42□□□□□ -1.54
USP16-205ENST00000474835 CYP2E1P05181 493 aaPredicted RBP5.42□□□□□ -1.54
USP16-205ENST00000474835 KIF2CQ99661 725 aa5.42□□□□□ -1.54
USP16-205ENST00000474835 AK9Q5TCS8 1911 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 NBR1Q14596 966 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.41□□□□□ -1.54
USP16-205ENST00000474835 RCAN3Q9UKA8 241 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 UGGT1Q9NYU2 1555 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 MYO5BQ9ULV0 1848 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 C9orf84Q5VXU9 1444 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 ASXL2Q76L83 1435 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 ZNF500O60304 480 aaPredicted RBP5.41□□□□□ -1.54
USP16-205ENST00000474835 HS1BP3Q53T59 392 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 C20orf194Q5TEA3 1177 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 KLHL34Q8N239 644 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 PDCL3Q9H2J4 239 aa5.41□□□□□ -1.54
USP16-205ENST00000474835 CEP170BQ9Y4F5 1589 aaPredicted RBP5.4□□□□□ -1.54
USP16-205ENST00000474835 POGKQ9P215 609 aa5.4□□□□□ -1.54
USP16-205ENST00000474835 CGNL1Q0VF96 1302 aa5.4□□□□□ -1.54
USP16-205ENST00000474835 EIF5BO60841 1220 aaKnown RBP5.4□□□□□ -1.54
USP16-205ENST00000474835 POLR3AO14802 1390 aaPredicted RBP5.4□□□□□ -1.55
USP16-205ENST00000474835 KIDINS220Q9ULH0 1771 aa5.4□□□□□ -1.55
USP16-205ENST00000474835 ATP10BO94823 1461 aa5.4□□□□□ -1.55
USP16-205ENST00000474835 SEC24BO95487 1268 aa5.4□□□□□ -1.55
USP16-205ENST00000474835 AMER1Q5JTC6 1135 aaPredicted RBP5.4□□□□□ -1.55
USP16-205ENST00000474835 MRS2Q9HD23 443 aa5.4□□□□□ -1.55
USP16-205ENST00000474835 ERCC6L2Q5T890 1561 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 SLC24A1O60721 1099 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 SLFN5Q08AF3 891 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 SMAP1Q8IYB5 467 aaPredicted RBP5.39□□□□□ -1.55
USP16-205ENST00000474835 C3P01024 1663 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 RAD50Q92878 1312 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 CACNA1FO60840 1977 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 CD163L1Q9NR16 1453 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 TULP4Q9NRJ4 1543 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 ZSCAN20P17040 1043 aaPredicted RBP5.39□□□□□ -1.55
USP16-205ENST00000474835 SNX21Q969T3 373 aa5.39□□□□□ -1.55
USP16-205ENST00000474835 TPM2P07951 284 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 FGD1P98174 961 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 SLC20A2Q08357 652 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 NLRP13Q86W25 1043 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 FMN2Q9NZ56 1722 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 OFD1O75665 1012 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 CHRM1P11229 460 aaPredicted RBP5.38□□□□□ -1.55
USP16-205ENST00000474835 RBM25P49756 843 aaKnown RBP5.38□□□□□ -1.55
USP16-205ENST00000474835 AATKQ6ZMQ8 1374 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 PDS5BQ9NTI5 1447 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 CRBNQ96SW2 442 aa5.38□□□□□ -1.55
USP16-205ENST00000474835 CDK12Q9NYV4 1490 aaPredicted RBP5.37□□□□□ -1.55
USP16-205ENST00000474835 SMC5Q8IY18 1101 aa5.37□□□□□ -1.55
USP16-205ENST00000474835 PARP4Q9UKK3 1724 aaKnown RBP5.37□□□□□ -1.55
USP16-205ENST00000474835 IGHDP01880 384 aa5.37□□□□□ -1.55
USP16-205ENST00000474835 GAS2L3Q86XJ1 694 aa5.37□□□□□ -1.55
USP16-205ENST00000474835 PRG4Q92954 1404 aaPredicted RBP5.37□□□□□ -1.55
USP16-205ENST00000474835 DMTNQ08495 405 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 MRC2Q9UBG0 1479 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 ATP7AQ04656 1500 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 TSPOAP1O95153 1857 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 ADAMTS7Q9UKP4 1686 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 BRPF1P55201 1214 aaPredicted RBP5.36□□□□□ -1.55
USP16-205ENST00000474835 SKAP1Q86WV1 359 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 CDCA7LQ96GN5 454 aa5.36□□□□□ -1.55
USP16-205ENST00000474835 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.36□□□□□ -1.55
USP16-205ENST00000474835 NGEFQ8N5V2 710 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 CHD1O14646 1710 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 PTCH1Q13635 1447 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 CD109Q6YHK3 1445 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 ZNF445P59923 1031 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 PDE3AQ14432 1141 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 CCDC27Q2M243 656 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 TBC1D2Q9BYX2 928 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 SPINK5Q9NQ38 1064 aaPredicted RBP5.35□□□□□ -1.55
USP16-205ENST00000474835 TCHHQ07283 1943 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 PANK2Q9BZ23 570 aa5.35□□□□□ -1.55
USP16-205ENST00000474835 SIPA1L3O60292 1781 aaPredicted RBP5.35□□□□□ -1.55
USP16-205ENST00000474835 MCM4P33991 863 aa5.34□□□□□ -1.55
USP16-205ENST00000474835 RAB3GAP1Q15042 981 aa5.34□□□□□ -1.55
USP16-205ENST00000474835 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
USP16-205ENST00000474835 ZNF710Q8N1W2 664 aa5.34□□□□□ -1.55
USP16-205ENST00000474835 NRXN3Q9Y4C0 1643 aa5.34□□□□□ -1.55
USP16-205ENST00000474835 ECM29Q5VYK3 1845 aa5.34□□□□□ -1.55
USP16-205ENST00000474835 SSH2Q76I76 1423 aa5.34□□□□□ -1.56
USP16-205ENST00000474835 GTF2E1P29083 439 aaPredicted RBP5.33□□□□□ -1.56
USP16-205ENST00000474835 RGS12O14924 1447 aa5.33□□□□□ -1.56
USP16-205ENST00000474835 TRAPPC8Q9Y2L5 1435 aa5.33□□□□□ -1.56
USP16-205ENST00000474835 PHRF1Q9P1Y6 1649 aaKnown RBP5.33□□□□□ -1.56
USP16-205ENST00000474835 MRE11P49959 708 aa5.33□□□□□ -1.56
USP16-205ENST00000474835 LAS1LQ9Y4W2 734 aaKnown RBP5.33□□□□□ -1.56
USP16-205ENST00000474835 DLC1Q96QB1 1528 aa5.33□□□□□ -1.56
USP16-205ENST00000474835 LAMA4Q16363 1823 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 PNPLA6Q8IY17 1366 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 ARHGEF40Q8TER5 1519 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms