RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 ESCO1Q5FWF5 840 aa20.32■□□□□ 0.84
RTN4R-206ENST00000474642 BLMP54132 1417 aaPredicted RBP20.31■□□□□ 0.84
RTN4R-206ENST00000474642 ITGAEP38570 1179 aa20.31■□□□□ 0.84
RTN4R-206ENST00000474642 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
RTN4R-206ENST00000474642 VGFO15240 615 aaPredicted RBP20.29■□□□□ 0.84
RTN4R-206ENST00000474642 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
RTN4R-206ENST00000474642 MARF1Q9Y4F3 1742 aaKnown RBP20.28■□□□□ 0.84
RTN4R-206ENST00000474642 DEFB132Q7Z7B7 95 aa20.28■□□□□ 0.84
RTN4R-206ENST00000474642 FOXO3O43524 673 aa20.27■□□□□ 0.84
RTN4R-206ENST00000474642 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.84
RTN4R-206ENST00000474642 HFM1A2PYH4 1435 aa20.27■□□□□ 0.83
RTN4R-206ENST00000474642 CLTCL1P53675 1640 aa20.26■□□□□ 0.83
RTN4R-206ENST00000474642 KIF1BO60333 1816 aa20.25■□□□□ 0.83
RTN4R-206ENST00000474642 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
RTN4R-206ENST00000474642 PXDNQ92626 1479 aa20.24■□□□□ 0.83
RTN4R-206ENST00000474642 LRPPRCP42704 1394 aaKnown RBP20.23■□□□□ 0.83
RTN4R-206ENST00000474642 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.22■□□□□ 0.83
RTN4R-206ENST00000474642 PRAG1Q86YV5 1406 aa20.21■□□□□ 0.83
RTN4R-206ENST00000474642 SEPT12Q8IYM1 358 aa20.21■□□□□ 0.83
RTN4R-206ENST00000474642 GLI3P10071 1580 aa20.21■□□□□ 0.83
RTN4R-206ENST00000474642 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
RTN4R-206ENST00000474642 SLIT2O94813 1529 aa20.2■□□□□ 0.82
RTN4R-206ENST00000474642 BRWD3Q6RI45 1802 aa20.2■□□□□ 0.82
RTN4R-206ENST00000474642 LRP5O75197 1615 aa20.19■□□□□ 0.82
RTN4R-206ENST00000474642 CDC42BPGQ6DT37 1551 aa20.18■□□□□ 0.82
RTN4R-206ENST00000474642 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
RTN4R-206ENST00000474642 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
RTN4R-206ENST00000474642 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
RTN4R-206ENST00000474642 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
RTN4R-206ENST00000474642 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
RTN4R-206ENST00000474642 KRT27Q7Z3Y8 459 aa20.15■□□□□ 0.82
RTN4R-206ENST00000474642 NAIPQ13075 1403 aa20.15■□□□□ 0.82
RTN4R-206ENST00000474642 BAG6P46379 1132 aa20.14■□□□□ 0.81
RTN4R-206ENST00000474642 VPS72Q15906 364 aa20.14■□□□□ 0.81
RTN4R-206ENST00000474642 HRCP23327 699 aa20.13■□□□□ 0.81
RTN4R-206ENST00000474642 WAPLQ7Z5K2 1190 aa20.13■□□□□ 0.81
RTN4R-206ENST00000474642 STK26Q9P289 416 aa20.13■□□□□ 0.81
RTN4R-206ENST00000474642 KRT28Q7Z3Y7 464 aa20.12■□□□□ 0.81
RTN4R-206ENST00000474642 USP32Q8NFA0 1604 aa20.12■□□□□ 0.81
RTN4R-206ENST00000474642 A0A0G2JS52 829 aa20.11■□□□□ 0.81
RTN4R-206ENST00000474642 PLEKHG5O94827 1062 aa20.11■□□□□ 0.81
RTN4R-206ENST00000474642 MYT1Q01538 1121 aa20.11■□□□□ 0.81
RTN4R-206ENST00000474642 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
RTN4R-206ENST00000474642 ONECUT3O60422 494 aaPredicted RBP20.1■□□□□ 0.81
RTN4R-206ENST00000474642 CABLES1Q8TDN4 633 aa20.09■□□□□ 0.81
RTN4R-206ENST00000474642 PPLO60437 1756 aa20.08■□□□□ 0.81
RTN4R-206ENST00000474642 PSME1Q06323 249 aa20.07■□□□□ 0.8
RTN4R-206ENST00000474642 LMOD2Q6P5Q4 547 aa20.06■□□□□ 0.8
RTN4R-206ENST00000474642 KIF1AQ12756 1690 aa20.06■□□□□ 0.8
RTN4R-206ENST00000474642 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
RTN4R-206ENST00000474642 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
RTN4R-206ENST00000474642 EN1Q05925 392 aaPredicted RBP20.04■□□□□ 0.8
RTN4R-206ENST00000474642 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
RTN4R-206ENST00000474642 NWD2Q9ULI1 1742 aa20.04■□□□□ 0.8
RTN4R-206ENST00000474642 PLCH1Q4KWH8 1693 aa20.03■□□□□ 0.8
RTN4R-206ENST00000474642 TECPR2O15040 1411 aa20.03■□□□□ 0.8
RTN4R-206ENST00000474642 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
RTN4R-206ENST00000474642 PHF8Q9UPP1 1060 aa20.03■□□□□ 0.8
RTN4R-206ENST00000474642 FMN2Q9NZ56 1722 aa20.02■□□□□ 0.8
RTN4R-206ENST00000474642 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.8
RTN4R-206ENST00000474642 FAM98CQ17RN3 349 aaKnown RBP20.02■□□□□ 0.8
RTN4R-206ENST00000474642 TMEM132EQ6IEE7 984 aa20.02■□□□□ 0.8
RTN4R-206ENST00000474642 PPARGC1BQ86YN6 1023 aaKnown RBP20.02■□□□□ 0.8
RTN4R-206ENST00000474642 ABCC11Q96J66 1382 aa20.02■□□□□ 0.8
RTN4R-206ENST00000474642 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
RTN4R-206ENST00000474642 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
RTN4R-206ENST00000474642 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
RTN4R-206ENST00000474642 RGL3Q3MIN7 710 aa19.99■□□□□ 0.79
RTN4R-206ENST00000474642 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
RTN4R-206ENST00000474642 FAM182BQ5T319 152 aa19.97■□□□□ 0.79
RTN4R-206ENST00000474642 RGPD8O14715 1765 aaPredicted RBP19.97■□□□□ 0.79
RTN4R-206ENST00000474642 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
RTN4R-206ENST00000474642 BTG4Q9NY30 223 aa19.96■□□□□ 0.79
RTN4R-206ENST00000474642 RGPD1P0DJD0 1748 aa19.96■□□□□ 0.79
RTN4R-206ENST00000474642 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
RTN4R-206ENST00000474642 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
RTN4R-206ENST00000474642 ABCA3Q99758 1704 aa19.94■□□□□ 0.78
RTN4R-206ENST00000474642 NRXN1Q9ULB1 1477 aa19.93■□□□□ 0.78
RTN4R-206ENST00000474642 YY1P25490 414 aa19.93■□□□□ 0.78
RTN4R-206ENST00000474642 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
RTN4R-206ENST00000474642 SIRT1Q96EB6 747 aa19.93■□□□□ 0.78
RTN4R-206ENST00000474642 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
RTN4R-206ENST00000474642 PMFBP1Q8TBY8 1022 aa19.92■□□□□ 0.78
RTN4R-206ENST00000474642 DISP2A7MBM2 1401 aa19.91■□□□□ 0.78
RTN4R-206ENST00000474642 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
RTN4R-206ENST00000474642 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
RTN4R-206ENST00000474642 PIK3C2GO75747 1445 aa19.89■□□□□ 0.77
RTN4R-206ENST00000474642 SPATA31A5Q5VU36 1347 aa19.89■□□□□ 0.77
RTN4R-206ENST00000474642 SPATA31A7Q8IWB4 1347 aa19.89■□□□□ 0.77
RTN4R-206ENST00000474642 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
RTN4R-206ENST00000474642 TRIM37O94972 964 aa19.87■□□□□ 0.77
RTN4R-206ENST00000474642 CAMKK2Q96RR4 588 aa19.87■□□□□ 0.77
RTN4R-206ENST00000474642 COL14A1Q05707 1796 aaKnown RBP19.87■□□□□ 0.77
RTN4R-206ENST00000474642 DHX57Q6P158 1386 aaKnown RBP19.86■□□□□ 0.77
RTN4R-206ENST00000474642 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
RTN4R-206ENST00000474642 TNS1Q9HBL0 1735 aaKnown RBP19.85■□□□□ 0.77
RTN4R-206ENST00000474642 GPRASP1Q5JY77 1395 aa19.85■□□□□ 0.77
RTN4R-206ENST00000474642 APBA3O96018 575 aa19.85■□□□□ 0.77
RTN4R-206ENST00000474642 FAM196AQ6ZSG2 479 aa19.85■□□□□ 0.77
RTN4R-206ENST00000474642 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms