RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 COL22A1Q8NFW1 1626 aaPredicted RBP30.56■■■□□ 2.48
APP-215ENST00000474136 XPCQ01831 940 aaPredicted RBP30.56■■■□□ 2.48
APP-215ENST00000474136 ZRANB1Q9UGI0 708 aa30.56■■■□□ 2.48
APP-215ENST00000474136 BCL9LQ86UU0 1499 aa30.54■■■□□ 2.48
APP-215ENST00000474136 NAIPQ13075 1403 aa30.54■■■□□ 2.48
APP-215ENST00000474136 NPHP3Q7Z494 1330 aa30.54■■■□□ 2.48
APP-215ENST00000474136 EP400Q96L91 3159 aa30.54■■■□□ 2.48
APP-215ENST00000474136 RPGRIP1LQ68CZ1 1315 aa30.53■■■□□ 2.48
APP-215ENST00000474136 FOXO3O43524 673 aa30.52■■■□□ 2.48
APP-215ENST00000474136 PXDNQ92626 1479 aa30.51■■■□□ 2.47
APP-215ENST00000474136 NUTM2FA1L443 756 aa30.48■■■□□ 2.47
APP-215ENST00000474136 GJD4Q96KN9 370 aaPredicted RBP30.48■■■□□ 2.47
APP-215ENST00000474136 FOXD1Q16676 465 aa30.47■■■□□ 2.47
APP-215ENST00000474136 CDC42BPGQ6DT37 1551 aa30.47■■■□□ 2.47
APP-215ENST00000474136 WAPLQ7Z5K2 1190 aa30.45■■■□□ 2.46
APP-215ENST00000474136 CCDC125Q86Z20 511 aa30.45■■■□□ 2.46
APP-215ENST00000474136 SLC4A1APQ9BWU0 796 aaKnown RBP30.44■■■□□ 2.46
APP-215ENST00000474136 STK26Q9P289 416 aa30.44■■■□□ 2.46
APP-215ENST00000474136 PPLO60437 1756 aa30.43■■■□□ 2.46
APP-215ENST00000474136 ADGRF5Q8IZF2 1346 aa30.43■■■□□ 2.46
APP-215ENST00000474136 RRBP1Q9P2E9 1410 aaKnown RBP30.4■■■□□ 2.46
APP-215ENST00000474136 MARF1Q9Y4F3 1742 aaKnown RBP30.38■■■□□ 2.45
APP-215ENST00000474136 LRPPRCP42704 1394 aaKnown RBP30.38■■■□□ 2.45
APP-215ENST00000474136 UNC5CLQ8IV45 518 aa30.38■■■□□ 2.45
APP-215ENST00000474136 PLEKHH1Q9ULM0 1364 aa30.37■■■□□ 2.45
APP-215ENST00000474136 RALGAPBQ86X10 1494 aa30.37■■■□□ 2.45
APP-215ENST00000474136 SPATA31A3Q5VYP0 1347 aa30.35■■■□□ 2.45
APP-215ENST00000474136 GLI3P10071 1580 aa30.35■■■□□ 2.45
APP-215ENST00000474136 SLIT2O94813 1529 aa30.35■■■□□ 2.45
APP-215ENST00000474136 TECPR2O15040 1411 aa30.34■■■□□ 2.45
APP-215ENST00000474136 RGL3Q3MIN7 710 aa30.34■■■□□ 2.45
APP-215ENST00000474136 TMEM132EQ6IEE7 984 aa30.34■■■□□ 2.45
APP-215ENST00000474136 DEFB132Q7Z7B7 95 aa30.32■■■□□ 2.44
APP-215ENST00000474136 BLMP54132 1417 aaPredicted RBP30.31■■■□□ 2.44
APP-215ENST00000474136 ABCC11Q96J66 1382 aa30.3■■■□□ 2.44
APP-215ENST00000474136 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.3■■■□□ 2.44
APP-215ENST00000474136 KRT28Q7Z3Y7 464 aa30.29■■■□□ 2.44
APP-215ENST00000474136 PLEKHG5O94827 1062 aa30.27■■■□□ 2.44
APP-215ENST00000474136 SEPT12Q8IYM1 358 aa30.26■■■□□ 2.44
APP-215ENST00000474136 CCDC144AA2RUR9 1427 aa30.25■■■□□ 2.43
APP-215ENST00000474136 CABLES1Q8TDN4 633 aa30.25■■■□□ 2.43
APP-215ENST00000474136 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
APP-215ENST00000474136 USP32Q8NFA0 1604 aa30.24■■■□□ 2.43
APP-215ENST00000474136 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
APP-215ENST00000474136 ANKRD30BQ9BXX2 1392 aa30.23■■■□□ 2.43
APP-215ENST00000474136 HAP1P54257 671 aaPredicted RBP30.22■■■□□ 2.43
APP-215ENST00000474136 VPS72Q15906 364 aa30.22■■■□□ 2.43
APP-215ENST00000474136 BRWD3Q6RI45 1802 aa30.21■■■□□ 2.43
APP-215ENST00000474136 YTHDC2Q9H6S0 1430 aaKnown RBP30.21■■■□□ 2.43
APP-215ENST00000474136 KIF1AQ12756 1690 aa30.2■■■□□ 2.43
APP-215ENST00000474136 SF3B2Q13435 895 aaKnown RBP30.2■■■□□ 2.42
APP-215ENST00000474136 PHF8Q9UPP1 1060 aa30.2■■■□□ 2.42
APP-215ENST00000474136 PIK3C2GO75747 1445 aa30.19■■■□□ 2.42
APP-215ENST00000474136 TNS3Q68CZ2 1445 aa30.19■■■□□ 2.42
APP-215ENST00000474136 KNDC1Q76NI1 1749 aa30.19■■■□□ 2.42
APP-215ENST00000474136 CCDC9Q9Y3X0 531 aaKnown RBP30.19■■■□□ 2.42
APP-215ENST00000474136 PSME1Q06323 249 aa30.16■■■□□ 2.42
APP-215ENST00000474136 IFT172Q9UG01 1749 aa30.16■■■□□ 2.42
APP-215ENST00000474136 ONECUT3O60422 494 aaPredicted RBP30.15■■■□□ 2.42
APP-215ENST00000474136 LMOD2Q6P5Q4 547 aa30.15■■■□□ 2.42
APP-215ENST00000474136 KRT27Q7Z3Y8 459 aa30.15■■■□□ 2.42
APP-215ENST00000474136 SIRT1Q96EB6 747 aa30.13■■■□□ 2.41
APP-215ENST00000474136 MPHOSPH9Q99550 1183 aa30.12■■■□□ 2.41
APP-215ENST00000474136 FAM83GA6ND36 823 aa30.11■■■□□ 2.41
APP-215ENST00000474136 SAFB2Q14151 953 aaKnown RBP eCLIP30.11■■■□□ 2.41
APP-215ENST00000474136 SBNO1A3KN83 1393 aa30.11■■■□□ 2.41
APP-215ENST00000474136 PLCH1Q4KWH8 1693 aa30.1■■■□□ 2.41
APP-215ENST00000474136 RGPD8O14715 1765 aaPredicted RBP30.1■■■□□ 2.41
APP-215ENST00000474136 C14orf93Q9H972 538 aaKnown RBP30.1■■■□□ 2.41
APP-215ENST00000474136 NRXN1Q9ULB1 1477 aa30.09■■■□□ 2.41
APP-215ENST00000474136 A0A0G2JS52 829 aa30.08■■■□□ 2.41
APP-215ENST00000474136 PSDA5PKW4 1024 aaPredicted RBP30.08■■■□□ 2.41
APP-215ENST00000474136 MYT1Q01538 1121 aa30.08■■■□□ 2.41
APP-215ENST00000474136 CFAP70Q5T0N1 1121 aa30.08■■■□□ 2.41
APP-215ENST00000474136 PMFBP1Q8TBY8 1022 aa30.07■■■□□ 2.4
APP-215ENST00000474136 PRAM1Q96QH2 718 aa30.06■■■□□ 2.4
APP-215ENST00000474136 ARHGEF10O15013 1369 aa30.06■■■□□ 2.4
APP-215ENST00000474136 NWD2Q9ULI1 1742 aa30.06■■■□□ 2.4
APP-215ENST00000474136 DHX57Q6P158 1386 aaKnown RBP30.04■■■□□ 2.4
APP-215ENST00000474136 ABCA3Q99758 1704 aa30.04■■■□□ 2.4
APP-215ENST00000474136 FAM98CQ17RN3 349 aaKnown RBP30.04■■■□□ 2.4
APP-215ENST00000474136 LRP5O75197 1615 aa30.03■■■□□ 2.4
APP-215ENST00000474136 BAG6P46379 1132 aa30.02■■■□□ 2.4
APP-215ENST00000474136 HRCP23327 699 aa30■■■□□ 2.39
APP-215ENST00000474136 BTG4Q9NY30 223 aa30■■■□□ 2.39
APP-215ENST00000474136 FAM182BQ5T319 152 aa29.98■■■□□ 2.39
APP-215ENST00000474136 EN1Q05925 392 aaPredicted RBP29.97■■■□□ 2.39
APP-215ENST00000474136 POGKQ9P215 609 aa29.97■■■□□ 2.39
APP-215ENST00000474136 ANKARQ7Z5J8 1434 aa29.95■■■□□ 2.39
APP-215ENST00000474136 NRAPQ86VF7 1730 aa29.95■■■□□ 2.39
APP-215ENST00000474136 HIRIP3Q9BW71 556 aaPredicted RBP29.94■■■□□ 2.38
APP-215ENST00000474136 PRR36Q9H6K5 1346 aa29.91■■■□□ 2.38
APP-215ENST00000474136 TRPM3Q9HCF6 1732 aaPredicted RBP29.9■■■□□ 2.38
APP-215ENST00000474136 SPATA31A5Q5VU36 1347 aa29.9■■■□□ 2.38
APP-215ENST00000474136 SPATA31A7Q8IWB4 1347 aa29.9■■■□□ 2.38
APP-215ENST00000474136 DLC1Q96QB1 1528 aa29.9■■■□□ 2.38
APP-215ENST00000474136 ACIN1Q9UKV3 1341 aaKnown RBP29.89■■■□□ 2.38
APP-215ENST00000474136 R3HDM1Q15032 1099 aaKnown RBP29.89■■■□□ 2.38
APP-215ENST00000474136 GPRASP1Q5JY77 1395 aa29.88■■■□□ 2.37
APP-215ENST00000474136 MINK1Q8N4C8 1332 aaPredicted RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms