RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
LMNA-213ENST00000473598 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
LMNA-213ENST00000473598 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
LMNA-213ENST00000473598 CDCA8Q53HL2 280 aa20.34■□□□□ 0.85
LMNA-213ENST00000473598 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
LMNA-213ENST00000473598 KCNA6P17658 529 aa20.33■□□□□ 0.85
LMNA-213ENST00000473598 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
LMNA-213ENST00000473598 TECPR2O15040 1411 aa20.31■□□□□ 0.84
LMNA-213ENST00000473598 PRAM1Q96QH2 718 aa20.31■□□□□ 0.84
LMNA-213ENST00000473598 AMOTL2Q9Y2J4 779 aa20.31■□□□□ 0.84
LMNA-213ENST00000473598 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
LMNA-213ENST00000473598 CPS1P31327 1500 aa20.31■□□□□ 0.84
LMNA-213ENST00000473598 MYOM1P52179 1685 aa20.3■□□□□ 0.84
LMNA-213ENST00000473598 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
LMNA-213ENST00000473598 POGKQ9P215 609 aa20.29■□□□□ 0.84
LMNA-213ENST00000473598 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
LMNA-213ENST00000473598 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
LMNA-213ENST00000473598 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
LMNA-213ENST00000473598 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
LMNA-213ENST00000473598 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
LMNA-213ENST00000473598 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
LMNA-213ENST00000473598 SIRT1Q96EB6 747 aa20.27■□□□□ 0.84
LMNA-213ENST00000473598 ANP32CO43423 234 aa20.27■□□□□ 0.84
LMNA-213ENST00000473598 CERKQ8TCT0 537 aa20.27■□□□□ 0.84
LMNA-213ENST00000473598 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
LMNA-213ENST00000473598 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
LMNA-213ENST00000473598 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
LMNA-213ENST00000473598 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
LMNA-213ENST00000473598 WAPLQ7Z5K2 1190 aa20.24■□□□□ 0.83
LMNA-213ENST00000473598 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
LMNA-213ENST00000473598 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
LMNA-213ENST00000473598 MINK1Q8N4C8 1332 aaPredicted RBP20.23■□□□□ 0.83
LMNA-213ENST00000473598 PUS7Q96PZ0 661 aaKnown RBP20.23■□□□□ 0.83
LMNA-213ENST00000473598 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
LMNA-213ENST00000473598 PANK3Q9H999 370 aa20.2■□□□□ 0.82
LMNA-213ENST00000473598 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
LMNA-213ENST00000473598 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.18■□□□□ 0.82
LMNA-213ENST00000473598 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
LMNA-213ENST00000473598 CABP2Q9NPB3 220 aa20.17■□□□□ 0.82
LMNA-213ENST00000473598 ADGRB2O60241 1585 aa20.16■□□□□ 0.82
LMNA-213ENST00000473598 SRPK2P78362 688 aaKnown RBP20.15■□□□□ 0.82
LMNA-213ENST00000473598 PRKRIP1Q9H875 184 aaPredicted RBP20.15■□□□□ 0.82
LMNA-213ENST00000473598 C14orf37Q86TY3 774 aa20.15■□□□□ 0.82
LMNA-213ENST00000473598 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
LMNA-213ENST00000473598 ATAD2Q6PL18 1390 aa20.14■□□□□ 0.81
LMNA-213ENST00000473598 IQSEC2Q5JU85 1478 aa20.13■□□□□ 0.81
LMNA-213ENST00000473598 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
LMNA-213ENST00000473598 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
LMNA-213ENST00000473598 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
LMNA-213ENST00000473598 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
LMNA-213ENST00000473598 NINLQ9Y2I6 1382 aa20.11■□□□□ 0.81
LMNA-213ENST00000473598 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
LMNA-213ENST00000473598 MSH6P52701 1360 aa20.1■□□□□ 0.81
LMNA-213ENST00000473598 ADGRL3Q9HAR2 1447 aa20.09■□□□□ 0.81
LMNA-213ENST00000473598 UBAP1LF5GYI3 381 aa20.09■□□□□ 0.81
LMNA-213ENST00000473598 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
LMNA-213ENST00000473598 NCOA3Q9Y6Q9 1424 aa20.08■□□□□ 0.81
LMNA-213ENST00000473598 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.8
LMNA-213ENST00000473598 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
LMNA-213ENST00000473598 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
LMNA-213ENST00000473598 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
LMNA-213ENST00000473598 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
LMNA-213ENST00000473598 RALBP1Q15311 655 aa20.05■□□□□ 0.8
LMNA-213ENST00000473598 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
LMNA-213ENST00000473598 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
LMNA-213ENST00000473598 USP32Q8NFA0 1604 aa20.04■□□□□ 0.8
LMNA-213ENST00000473598 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
LMNA-213ENST00000473598 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
LMNA-213ENST00000473598 ATP7BP35670 1465 aa20.03■□□□□ 0.8
LMNA-213ENST00000473598 CD163L1Q9NR16 1453 aa20.03■□□□□ 0.8
LMNA-213ENST00000473598 TOPAZ1Q8N9V7 1692 aa20.03■□□□□ 0.8
LMNA-213ENST00000473598 TOM1O60784 492 aa20.03■□□□□ 0.8
LMNA-213ENST00000473598 ATF3P18847 181 aa20.02■□□□□ 0.8
LMNA-213ENST00000473598 CC2D1BQ5T0F9 858 aaKnown RBP20.02■□□□□ 0.8
LMNA-213ENST00000473598 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
LMNA-213ENST00000473598 NSD3Q9BZ95 1437 aa20.02■□□□□ 0.8
LMNA-213ENST00000473598 A0A1W2PP64 1363 aa20.02■□□□□ 0.8
LMNA-213ENST00000473598 CABP1Q9NZU7 370 aa20.02■□□□□ 0.79
LMNA-213ENST00000473598 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
LMNA-213ENST00000473598 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
LMNA-213ENST00000473598 TERF2IPQ9NYB0 399 aa20.01■□□□□ 0.79
LMNA-213ENST00000473598 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
LMNA-213ENST00000473598 DCCP43146 1447 aa20■□□□□ 0.79
LMNA-213ENST00000473598 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
LMNA-213ENST00000473598 NUTM2FA1L443 756 aa20■□□□□ 0.79
LMNA-213ENST00000473598 ITSN1Q15811 1721 aa20■□□□□ 0.79
LMNA-213ENST00000473598 PRR36Q9H6K5 1346 aa20■□□□□ 0.79
LMNA-213ENST00000473598 CCDC61Q9Y6R9 512 aa20■□□□□ 0.79
LMNA-213ENST00000473598 FBXO41Q8TF61 875 aa19.99■□□□□ 0.79
LMNA-213ENST00000473598 SLAIN2Q9P270 581 aa19.99■□□□□ 0.79
LMNA-213ENST00000473598 CDC42BPGQ6DT37 1551 aa19.99■□□□□ 0.79
LMNA-213ENST00000473598 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
LMNA-213ENST00000473598 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
LMNA-213ENST00000473598 MST1RQ04912 1400 aa19.98■□□□□ 0.79
LMNA-213ENST00000473598 HDGFL2Q7Z4V5 671 aaPredicted RBP19.98■□□□□ 0.79
LMNA-213ENST00000473598 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
LMNA-213ENST00000473598 CPSF1Q10570 1443 aaKnown RBP19.96■□□□□ 0.79
LMNA-213ENST00000473598 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
LMNA-213ENST00000473598 CGNL1Q0VF96 1302 aa19.95■□□□□ 0.78
LMNA-213ENST00000473598 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms