RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
SORT1-203ENST00000471996 GJD4Q96KN9 370 aaPredicted RBP29.09■■■□□ 2.25
SORT1-203ENST00000471996 VGFO15240 615 aaPredicted RBP29.08■■■□□ 2.25
SORT1-203ENST00000471996 NPHP3Q7Z494 1330 aa29.08■■■□□ 2.25
SORT1-203ENST00000471996 HFM1A2PYH4 1435 aa29.06■■■□□ 2.24
SORT1-203ENST00000471996 ESCO1Q5FWF5 840 aa29.05■■■□□ 2.24
SORT1-203ENST00000471996 PXDNQ92626 1479 aa29.02■■■□□ 2.24
SORT1-203ENST00000471996 FOXO3O43524 673 aa28.99■■■□□ 2.23
SORT1-203ENST00000471996 BLMP54132 1417 aaPredicted RBP28.99■■■□□ 2.23
SORT1-203ENST00000471996 XPCQ01831 940 aaPredicted RBP28.98■■■□□ 2.23
SORT1-203ENST00000471996 RPGRIP1LQ68CZ1 1315 aa28.97■■■□□ 2.23
SORT1-203ENST00000471996 UNC5CLQ8IV45 518 aa28.97■■■□□ 2.23
SORT1-203ENST00000471996 KIF1BO60333 1816 aa28.96■■■□□ 2.23
SORT1-203ENST00000471996 LRPPRCP42704 1394 aaKnown RBP28.95■■■□□ 2.22
SORT1-203ENST00000471996 CDC42BPGQ6DT37 1551 aa28.95■■■□□ 2.22
SORT1-203ENST00000471996 RALGAPBQ86X10 1494 aa28.94■■■□□ 2.22
SORT1-203ENST00000471996 MARF1Q9Y4F3 1742 aaKnown RBP28.94■■■□□ 2.22
SORT1-203ENST00000471996 DEFB132Q7Z7B7 95 aa28.93■■■□□ 2.22
SORT1-203ENST00000471996 SLIT2O94813 1529 aa28.92■■■□□ 2.22
SORT1-203ENST00000471996 GLI3P10071 1580 aa28.91■■■□□ 2.22
SORT1-203ENST00000471996 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.9■■■□□ 2.22
SORT1-203ENST00000471996 NAIPQ13075 1403 aa28.88■■■□□ 2.21
SORT1-203ENST00000471996 SF3B2Q13435 895 aaKnown RBP28.88■■■□□ 2.21
SORT1-203ENST00000471996 NUTM2FA1L443 756 aa28.87■■■□□ 2.21
SORT1-203ENST00000471996 SPATA31A3Q5VYP0 1347 aa28.87■■■□□ 2.21
SORT1-203ENST00000471996 SEPT12Q8IYM1 358 aa28.86■■■□□ 2.21
SORT1-203ENST00000471996 WAPLQ7Z5K2 1190 aa28.84■■■□□ 2.21
SORT1-203ENST00000471996 TECPR2O15040 1411 aa28.81■■■□□ 2.2
SORT1-203ENST00000471996 VPS72Q15906 364 aa28.81■■■□□ 2.2
SORT1-203ENST00000471996 STK26Q9P289 416 aa28.81■■■□□ 2.2
SORT1-203ENST00000471996 ONECUT3O60422 494 aaPredicted RBP28.79■■■□□ 2.2
SORT1-203ENST00000471996 KRT28Q7Z3Y7 464 aa28.79■■■□□ 2.2
SORT1-203ENST00000471996 PPLO60437 1756 aa28.79■■■□□ 2.2
SORT1-203ENST00000471996 LRP5O75197 1615 aa28.79■■■□□ 2.2
SORT1-203ENST00000471996 CCDC144AA2RUR9 1427 aa28.78■■■□□ 2.2
SORT1-203ENST00000471996 USP32Q8NFA0 1604 aa28.77■■■□□ 2.2
SORT1-203ENST00000471996 ADGRF5Q8IZF2 1346 aa28.77■■■□□ 2.2
SORT1-203ENST00000471996 BRWD3Q6RI45 1802 aa28.76■■■□□ 2.19
SORT1-203ENST00000471996 KRT27Q7Z3Y8 459 aa28.76■■■□□ 2.19
SORT1-203ENST00000471996 PPARGC1BQ86YN6 1023 aaKnown RBP28.76■■■□□ 2.19
SORT1-203ENST00000471996 ABCC11Q96J66 1382 aa28.75■■■□□ 2.19
SORT1-203ENST00000471996 PLEKHH1Q9ULM0 1364 aa28.75■■■□□ 2.19
SORT1-203ENST00000471996 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
SORT1-203ENST00000471996 SLC4A1APQ9BWU0 796 aaKnown RBP28.74■■■□□ 2.19
SORT1-203ENST00000471996 CCDC9Q9Y3X0 531 aaKnown RBP28.73■■■□□ 2.19
SORT1-203ENST00000471996 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
SORT1-203ENST00000471996 CABLES1Q8TDN4 633 aa28.72■■■□□ 2.19
SORT1-203ENST00000471996 KIF1AQ12756 1690 aa28.71■■■□□ 2.19
SORT1-203ENST00000471996 PSDA5PKW4 1024 aaPredicted RBP28.71■■■□□ 2.19
SORT1-203ENST00000471996 TNS3Q68CZ2 1445 aa28.7■■■□□ 2.19
SORT1-203ENST00000471996 HRCP23327 699 aa28.7■■■□□ 2.18
SORT1-203ENST00000471996 BAG6P46379 1132 aa28.7■■■□□ 2.18
SORT1-203ENST00000471996 PSME1Q06323 249 aa28.7■■■□□ 2.18
SORT1-203ENST00000471996 TMEM132EQ6IEE7 984 aa28.7■■■□□ 2.18
SORT1-203ENST00000471996 FMN2Q9NZ56 1722 aa28.69■■■□□ 2.18
SORT1-203ENST00000471996 PHF8Q9UPP1 1060 aa28.68■■■□□ 2.18
SORT1-203ENST00000471996 ANKRD30BQ9BXX2 1392 aa28.65■■■□□ 2.18
SORT1-203ENST00000471996 PLEKHG5O94827 1062 aa28.65■■■□□ 2.18
SORT1-203ENST00000471996 RGL3Q3MIN7 710 aa28.65■■■□□ 2.18
SORT1-203ENST00000471996 SBNO1A3KN83 1393 aa28.64■■■□□ 2.18
SORT1-203ENST00000471996 NWD2Q9ULI1 1742 aa28.64■■■□□ 2.18
SORT1-203ENST00000471996 SIRT1Q96EB6 747 aa28.64■■■□□ 2.18
SORT1-203ENST00000471996 FAM83GA6ND36 823 aa28.63■■■□□ 2.17
SORT1-203ENST00000471996 KNDC1Q76NI1 1749 aa28.63■■■□□ 2.17
SORT1-203ENST00000471996 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
SORT1-203ENST00000471996 PLCH1Q4KWH8 1693 aa28.62■■■□□ 2.17
SORT1-203ENST00000471996 A0A0G2JS52 829 aa28.62■■■□□ 2.17
SORT1-203ENST00000471996 MYT1Q01538 1121 aa28.62■■■□□ 2.17
SORT1-203ENST00000471996 ARHGEF10O15013 1369 aa28.62■■■□□ 2.17
SORT1-203ENST00000471996 LMOD2Q6P5Q4 547 aa28.61■■■□□ 2.17
SORT1-203ENST00000471996 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
SORT1-203ENST00000471996 FAM98CQ17RN3 349 aaKnown RBP28.6■■■□□ 2.17
SORT1-203ENST00000471996 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
SORT1-203ENST00000471996 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
SORT1-203ENST00000471996 EN1Q05925 392 aaPredicted RBP28.58■■■□□ 2.17
SORT1-203ENST00000471996 BTG4Q9NY30 223 aa28.54■■■□□ 2.16
SORT1-203ENST00000471996 ABCA3Q99758 1704 aa28.54■■■□□ 2.16
SORT1-203ENST00000471996 R3HDM1Q15032 1099 aaKnown RBP28.53■■■□□ 2.16
SORT1-203ENST00000471996 IFT172Q9UG01 1749 aa28.52■■■□□ 2.16
SORT1-203ENST00000471996 C14orf93Q9H972 538 aaKnown RBP28.51■■■□□ 2.15
SORT1-203ENST00000471996 RGPD8O14715 1765 aaPredicted RBP28.5■■■□□ 2.15
SORT1-203ENST00000471996 PMFBP1Q8TBY8 1022 aa28.5■■■□□ 2.15
SORT1-203ENST00000471996 DISP2A7MBM2 1401 aa28.5■■■□□ 2.15
SORT1-203ENST00000471996 FAM182BQ5T319 152 aa28.49■■■□□ 2.15
SORT1-203ENST00000471996 NRAPQ86VF7 1730 aa28.49■■■□□ 2.15
SORT1-203ENST00000471996 DHX57Q6P158 1386 aaKnown RBP28.48■■■□□ 2.15
SORT1-203ENST00000471996 SAFB2Q14151 953 aaKnown RBP eCLIP28.47■■■□□ 2.15
SORT1-203ENST00000471996 PRAM1Q96QH2 718 aa28.47■■■□□ 2.15
SORT1-203ENST00000471996 SPATA31A5Q5VU36 1347 aa28.46■■■□□ 2.15
SORT1-203ENST00000471996 SPATA31A7Q8IWB4 1347 aa28.46■■■□□ 2.15
SORT1-203ENST00000471996 RGPD1P0DJD0 1748 aa28.46■■■□□ 2.15
SORT1-203ENST00000471996 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
SORT1-203ENST00000471996 CFAP70Q5T0N1 1121 aa28.44■■■□□ 2.14
SORT1-203ENST00000471996 EZH2Q15910 746 aaKnown RBP28.43■■■□□ 2.14
SORT1-203ENST00000471996 MPHOSPH9Q99550 1183 aa28.42■■■□□ 2.14
SORT1-203ENST00000471996 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
SORT1-203ENST00000471996 CAMKK2Q96RR4 588 aa28.4■■■□□ 2.14
SORT1-203ENST00000471996 GPRASP1Q5JY77 1395 aa28.39■■■□□ 2.14
SORT1-203ENST00000471996 POGKQ9P215 609 aa28.39■■■□□ 2.14
SORT1-203ENST00000471996 TRPM3Q9HCF6 1732 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms