RNA–Protein interactions for RNA: ENST00000471244.1

RNF216P1-210, Transcript of ring finger protein 216 pseudogene 1, human

TSL 2

Gene RNF216P1, Length 3,632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF216P1-210	ENST00000471244	POLR3A	O14802	1390 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF216P1-210	ENST00000471244	MVP	Q14764	893 aa	Known RBP	13.7	□□□□□ -0.22
RNF216P1-210	ENST00000471244	CFAP53	Q96M91	514 aa		13.7	□□□□□ -0.22
RNF216P1-210	ENST00000471244	BCL2L13	Q9BXK5	485 aa		13.7	□□□□□ -0.22
RNF216P1-210	ENST00000471244	MORC1	Q86VD1	984 aa		13.7	□□□□□ -0.22
RNF216P1-210	ENST00000471244	SAMD9L	Q8IVG5	1584 aa		13.69	□□□□□ -0.22
RNF216P1-210	ENST00000471244	DZIP1L	Q8IYY4	767 aa	Known RBP	13.69	□□□□□ -0.22
RNF216P1-210	ENST00000471244	RLBP1	P12271	317 aa		13.69	□□□□□ -0.22
RNF216P1-210	ENST00000471244	TCP11L2	Q8N4U5	519 aa		13.69	□□□□□ -0.22
RNF216P1-210	ENST00000471244	RRP7A	Q9Y3A4	280 aa	Known RBP	13.69	□□□□□ -0.22
RNF216P1-210	ENST00000471244	IQGAP1	P46940	1657 aa		13.68	□□□□□ -0.22
RNF216P1-210	ENST00000471244	CCDC173	Q0VFZ6	552 aa		13.68	□□□□□ -0.22
RNF216P1-210	ENST00000471244	PDCL3	Q9H2J4	239 aa		13.68	□□□□□ -0.22
RNF216P1-210	ENST00000471244	MAST1	Q9Y2H9	1570 aa		13.68	□□□□□ -0.22
RNF216P1-210	ENST00000471244	KDM5A	P29375	1690 aa	Known RBP	13.68	□□□□□ -0.22
RNF216P1-210	ENST00000471244	MSN	P26038	577 aa	Known RBP	13.67	□□□□□ -0.22
RNF216P1-210	ENST00000471244	DUOX2	Q9NRD8	1548 aa		13.67	□□□□□ -0.22
RNF216P1-210	ENST00000471244	ARHGAP5	Q13017	1502 aa		13.67	□□□□□ -0.22
RNF216P1-210	ENST00000471244	SYCP2	Q9BX26	1530 aa		13.67	□□□□□ -0.22
RNF216P1-210	ENST00000471244	SNX21	Q969T3	373 aa		13.66	□□□□□ -0.22
RNF216P1-210	ENST00000471244	DDX19B	Q9UMR2	479 aa		13.66	□□□□□ -0.22
RNF216P1-210	ENST00000471244	PREX2	Q70Z35	1606 aa		13.66	□□□□□ -0.22
RNF216P1-210	ENST00000471244	CT47B1	P0C2W7	299 aa	Predicted RBP	13.66	□□□□□ -0.22
RNF216P1-210	ENST00000471244	MADD	Q8WXG6	1647 aa		13.65	□□□□□ -0.22
RNF216P1-210	ENST00000471244	TNPO1	Q92973	898 aa	Known RBP	13.65	□□□□□ -0.22
RNF216P1-210	ENST00000471244	HDAC1	Q13547	482 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF216P1-210	ENST00000471244	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.65	□□□□□ -0.22
RNF216P1-210	ENST00000471244	CCDC27	Q2M243	656 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	SMC5	Q8IY18	1101 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	TNN	Q9UQP3	1299 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	ITPRIP	Q8IWB1	547 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	SMC4	Q9NTJ3	1288 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	KIAA1211	Q6ZU35	1233 aa		13.64	□□□□□ -0.23
RNF216P1-210	ENST00000471244	TTC37	Q6PGP7	1564 aa		13.63	□□□□□ -0.23
RNF216P1-210	ENST00000471244	TNNT2	P45379	298 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF216P1-210	ENST00000471244	NASP	P49321	788 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF216P1-210	ENST00000471244	ZSCAN30	Q86W11	494 aa		13.63	□□□□□ -0.23
RNF216P1-210	ENST00000471244	RBM25	P49756	843 aa	Known RBP	13.63	□□□□□ -0.23
RNF216P1-210	ENST00000471244	ERBB4	Q15303	1308 aa		13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	CDC42BPB	Q9Y5S2	1711 aa		13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	RAB3GAP1	Q15042	981 aa		13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	CARD14	Q9BXL6	1004 aa		13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	NCBP3	Q53F19	620 aa	Known RBP	13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	MAP7D2	Q96T17	732 aa		13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	ZNF692	Q9BU19	519 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF216P1-210	ENST00000471244	MYOM1	P52179	1685 aa		13.61	□□□□□ -0.23
RNF216P1-210	ENST00000471244	KANK1	Q14678	1352 aa		13.61	□□□□□ -0.23
RNF216P1-210	ENST00000471244	ERCC6	Q03468	1493 aa		13.61	□□□□□ -0.23
RNF216P1-210	ENST00000471244	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.6	□□□□□ -0.23
RNF216P1-210	ENST00000471244	NCOA3	Q9Y6Q9	1424 aa		13.6	□□□□□ -0.23
RNF216P1-210	ENST00000471244	IPO8	O15397	1037 aa	Known RBP	13.6	□□□□□ -0.23
RNF216P1-210	ENST00000471244	PHF23	Q9BUL5	403 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF216P1-210	ENST00000471244	DDX49	Q9Y6V7	483 aa	Known RBP	13.6	□□□□□ -0.23
RNF216P1-210	ENST00000471244	GAS2L3	Q86XJ1	694 aa		13.59	□□□□□ -0.23
RNF216P1-210	ENST00000471244	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF216P1-210	ENST00000471244	TERF1	P54274	439 aa		13.59	□□□□□ -0.23
RNF216P1-210	ENST00000471244	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RNF216P1-210	ENST00000471244	PPP1R9B	Q96SB3	815 aa		13.59	□□□□□ -0.23
RNF216P1-210	ENST00000471244	OFD1	O75665	1012 aa		13.58	□□□□□ -0.23
RNF216P1-210	ENST00000471244	CHMP4B	Q9H444	224 aa	Known RBP	13.58	□□□□□ -0.23
RNF216P1-210	ENST00000471244	SPHKAP	Q2M3C7	1700 aa		13.58	□□□□□ -0.24
RNF216P1-210	ENST00000471244	DDIT3	P35638	169 aa		13.58	□□□□□ -0.24
RNF216P1-210	ENST00000471244		K7ELQ4	463 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF216P1-210	ENST00000471244	ATF7IP	Q6VMQ6	1270 aa		13.58	□□□□□ -0.24
RNF216P1-210	ENST00000471244	NSD3	Q9BZ95	1437 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	DNAJC5B	Q9UF47	199 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	ERVK-7	P63135	1459 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	MTHFS	P49914	203 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CFAP70	Q5T0N1	1121 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	TRPM2	O94759	1503 aa		13.57	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CALD1	Q05682	793 aa	Known RBP	13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	FOXD4L1	Q9NU39	408 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	KIF16B	Q96L93	1317 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CEP152	O94986	1710 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	KLHL40	Q2TBA0	621 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	EFCAB2	Q5VUJ9	269 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	TRIM27	P14373	513 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	NCL	P19338	710 aa	Known RBP	13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CFAP44	Q96MT7	982 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	LNPK	Q9C0E8	428 aa		13.56	□□□□□ -0.24
RNF216P1-210	ENST00000471244	HS1BP3	Q53T59	392 aa		13.55	□□□□□ -0.24
RNF216P1-210	ENST00000471244	IQSEC2	Q5JU85	1478 aa		13.55	□□□□□ -0.24
RNF216P1-210	ENST00000471244	EXOSC9	Q06265	439 aa	Known RBP	13.55	□□□□□ -0.24
RNF216P1-210	ENST00000471244	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF216P1-210	ENST00000471244	NUCB1	Q02818	461 aa		13.54	□□□□□ -0.24
RNF216P1-210	ENST00000471244	BMP2KL	Q5H9B9	411 aa		13.54	□□□□□ -0.24
RNF216P1-210	ENST00000471244	KIAA1210	Q9ULL0	1709 aa		13.54	□□□□□ -0.24
RNF216P1-210	ENST00000471244	MTERF4	Q7Z6M4	381 aa	Known RBP	13.54	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CHD1L	Q86WJ1	897 aa		13.54	□□□□□ -0.24
RNF216P1-210	ENST00000471244	NUCB2	P80303	420 aa		13.53	□□□□□ -0.24
RNF216P1-210	ENST00000471244	CSPP1	Q1MSJ5	1256 aa		13.53	□□□□□ -0.24
RNF216P1-210	ENST00000471244	TSR2	Q969E8	191 aa	Known RBP	13.53	□□□□□ -0.24
RNF216P1-210	ENST00000471244	NOB1	Q9ULX3	412 aa	Known RBP	13.53	□□□□□ -0.24
RNF216P1-210	ENST00000471244	SBNO2	Q9Y2G9	1366 aa		13.53	□□□□□ -0.24
RNF216P1-210	ENST00000471244	SSH1	Q8WYL5	1049 aa		13.52	□□□□□ -0.24
RNF216P1-210	ENST00000471244	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.52	□□□□□ -0.24
RNF216P1-210	ENST00000471244	SPAG9	O60271	1321 aa	Known RBP	13.52	□□□□□ -0.24
RNF216P1-210	ENST00000471244	SSFA2	P28290	1259 aa		13.52	□□□□□ -0.25
RNF216P1-210	ENST00000471244	TMEM57	Q8N5G2	664 aa		13.52	□□□□□ -0.25
RNF216P1-210	ENST00000471244	PTPRT	O14522	1441 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms