RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 E9PSI1 815 aa17.51■□□□□ 0.39
NPHP4-207ENST00000470763 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-207ENST00000470763 HECW2Q9P2P5 1572 aa17.5■□□□□ 0.39
NPHP4-207ENST00000470763 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
NPHP4-207ENST00000470763 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
NPHP4-207ENST00000470763 MRE11P49959 708 aa17.5■□□□□ 0.39
NPHP4-207ENST00000470763 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
NPHP4-207ENST00000470763 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
NPHP4-207ENST00000470763 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
NPHP4-207ENST00000470763 ESPNB1AK53 854 aa17.49■□□□□ 0.39
NPHP4-207ENST00000470763 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
NPHP4-207ENST00000470763 GRPEL1Q9HAV7 217 aa17.48■□□□□ 0.39
NPHP4-207ENST00000470763 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
NPHP4-207ENST00000470763 DIP2CQ9Y2E4 1556 aa17.48■□□□□ 0.39
NPHP4-207ENST00000470763 ABCA6Q8N139 1617 aa17.48■□□□□ 0.39
NPHP4-207ENST00000470763 SHANK2Q9UPX8 1470 aa17.47■□□□□ 0.39
NPHP4-207ENST00000470763 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
NPHP4-207ENST00000470763 CHMP5Q9NZZ3 219 aa17.46■□□□□ 0.39
NPHP4-207ENST00000470763 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
NPHP4-207ENST00000470763 MLECQ14165 292 aa17.46■□□□□ 0.39
NPHP4-207ENST00000470763 KIDINS220Q9ULH0 1771 aa17.46■□□□□ 0.39
NPHP4-207ENST00000470763 NEUROD2Q15784 382 aa17.46■□□□□ 0.39
NPHP4-207ENST00000470763 RIMS1Q86UR5 1692 aaKnown RBP17.45■□□□□ 0.38
NPHP4-207ENST00000470763 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
NPHP4-207ENST00000470763 RLBP1P12271 317 aa17.45■□□□□ 0.38
NPHP4-207ENST00000470763 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
NPHP4-207ENST00000470763 LAMC1P11047 1609 aa17.44■□□□□ 0.38
NPHP4-207ENST00000470763 TRIM44Q96DX7 344 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-207ENST00000470763 REREQ9P2R6 1566 aa17.43■□□□□ 0.38
NPHP4-207ENST00000470763 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
NPHP4-207ENST00000470763 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
NPHP4-207ENST00000470763 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
NPHP4-207ENST00000470763 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
NPHP4-207ENST00000470763 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
NPHP4-207ENST00000470763 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
NPHP4-207ENST00000470763 GAS2L3Q86XJ1 694 aa17.4■□□□□ 0.38
NPHP4-207ENST00000470763 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
NPHP4-207ENST00000470763 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
NPHP4-207ENST00000470763 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
NPHP4-207ENST00000470763 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
NPHP4-207ENST00000470763 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
NPHP4-207ENST00000470763 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
NPHP4-207ENST00000470763 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
NPHP4-207ENST00000470763 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
NPHP4-207ENST00000470763 AGLP35573 1532 aa17.37■□□□□ 0.37
NPHP4-207ENST00000470763 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
NPHP4-207ENST00000470763 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
NPHP4-207ENST00000470763 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
NPHP4-207ENST00000470763 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
NPHP4-207ENST00000470763 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
NPHP4-207ENST00000470763 SYNMO15061 1565 aa17.34■□□□□ 0.37
NPHP4-207ENST00000470763 KIAA1211Q6ZU35 1233 aa17.34■□□□□ 0.37
NPHP4-207ENST00000470763 LMTK3Q96Q04 1460 aa17.34■□□□□ 0.37
NPHP4-207ENST00000470763 TNPO1Q92973 898 aaKnown RBP17.33■□□□□ 0.37
NPHP4-207ENST00000470763 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
NPHP4-207ENST00000470763 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-207ENST00000470763 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
NPHP4-207ENST00000470763 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
NPHP4-207ENST00000470763 TPM2P07951 284 aa17.32■□□□□ 0.36
NPHP4-207ENST00000470763 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
NPHP4-207ENST00000470763 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-207ENST00000470763 ZMYM3Q14202 1370 aa17.31■□□□□ 0.36
NPHP4-207ENST00000470763 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
NPHP4-207ENST00000470763 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
NPHP4-207ENST00000470763 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
NPHP4-207ENST00000470763 MYOM1P52179 1685 aa17.3■□□□□ 0.36
NPHP4-207ENST00000470763 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
NPHP4-207ENST00000470763 IQGAP1P46940 1657 aa17.27■□□□□ 0.36
NPHP4-207ENST00000470763 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
NPHP4-207ENST00000470763 MVPQ14764 893 aaKnown RBP17.27■□□□□ 0.36
NPHP4-207ENST00000470763 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
NPHP4-207ENST00000470763 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
NPHP4-207ENST00000470763 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
NPHP4-207ENST00000470763 DDIT3P35638 169 aa17.27■□□□□ 0.35
NPHP4-207ENST00000470763 AAMPQ13685 434 aa17.27■□□□□ 0.35
NPHP4-207ENST00000470763 NGEFQ8N5V2 710 aa17.27■□□□□ 0.35
NPHP4-207ENST00000470763 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
NPHP4-207ENST00000470763 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
NPHP4-207ENST00000470763 HSPA2P54652 639 aa17.25■□□□□ 0.35
NPHP4-207ENST00000470763 C3P01024 1663 aa17.25■□□□□ 0.35
NPHP4-207ENST00000470763 UNC13BO14795 1591 aa17.25■□□□□ 0.35
NPHP4-207ENST00000470763 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
NPHP4-207ENST00000470763 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
NPHP4-207ENST00000470763 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
NPHP4-207ENST00000470763 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
NPHP4-207ENST00000470763 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
NPHP4-207ENST00000470763 RAB3GAP1Q15042 981 aa17.23■□□□□ 0.35
NPHP4-207ENST00000470763 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
NPHP4-207ENST00000470763 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 ARID3AQ99856 593 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
NPHP4-207ENST00000470763 CD2BP2O95400 341 aaKnown RBP17.22■□□□□ 0.35
NPHP4-207ENST00000470763 MSNP26038 577 aaKnown RBP17.22■□□□□ 0.35
NPHP4-207ENST00000470763 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
NPHP4-207ENST00000470763 RIPK4P57078 832 aa17.21■□□□□ 0.35
NPHP4-207ENST00000470763 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
NPHP4-207ENST00000470763 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms