RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
RBM39-227ENST00000470563 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
RBM39-227ENST00000470563 GPR37L1O60883 481 aa10.04□□□□□ -0.8
RBM39-227ENST00000470563 FUT2Q10981 343 aa10.04□□□□□ -0.8
RBM39-227ENST00000470563 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
RBM39-227ENST00000470563 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
RBM39-227ENST00000470563 ARID3AQ99856 593 aa10.04□□□□□ -0.8
RBM39-227ENST00000470563 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
RBM39-227ENST00000470563 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
RBM39-227ENST00000470563 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
RBM39-227ENST00000470563 HRO43593 1189 aa10.02□□□□□ -0.81
RBM39-227ENST00000470563 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
RBM39-227ENST00000470563 MORN1Q5T089 497 aa10.02□□□□□ -0.81
RBM39-227ENST00000470563 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
RBM39-227ENST00000470563 AXIN2Q9Y2T1 843 aa10.02□□□□□ -0.81
RBM39-227ENST00000470563 IRF5Q13568 498 aa10.01□□□□□ -0.81
RBM39-227ENST00000470563 Q3C1V9 767 aa10.01□□□□□ -0.81
RBM39-227ENST00000470563 CFAP99D6REC4 459 aa10□□□□□ -0.81
RBM39-227ENST00000470563 HLA-CQ95604 372 aa10□□□□□ -0.81
RBM39-227ENST00000470563 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.813e-18■■□□□ 11.8
RBM39-227ENST00000470563 GUCA2AQ02747 115 aa9.99□□□□□ -0.81
RBM39-227ENST00000470563 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
RBM39-227ENST00000470563 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
RBM39-227ENST00000470563 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
RBM39-227ENST00000470563 LRCH3Q96II8 777 aa9.99□□□□□ -0.81
RBM39-227ENST00000470563 SOX11P35716 441 aa9.98□□□□□ -0.81
RBM39-227ENST00000470563 ABL2P42684 1182 aa9.98□□□□□ -0.81
RBM39-227ENST00000470563 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
RBM39-227ENST00000470563 HMX1Q9NP08 348 aaPredicted RBP9.98□□□□□ -0.81
RBM39-227ENST00000470563 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
RBM39-227ENST00000470563 TRAIPQ9BWF2 469 aa9.97□□□□□ -0.81
RBM39-227ENST00000470563 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
RBM39-227ENST00000470563 GLMNQ92990 594 aa9.96□□□□□ -0.82
RBM39-227ENST00000470563 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
RBM39-227ENST00000470563 PRR7Q8TB68 274 aa9.95□□□□□ -0.82
RBM39-227ENST00000470563 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
RBM39-227ENST00000470563 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
RBM39-227ENST00000470563 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
RBM39-227ENST00000470563 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
RBM39-227ENST00000470563 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
RBM39-227ENST00000470563 PDIA4P13667 645 aaKnown RBP9.93□□□□□ -0.82
RBM39-227ENST00000470563 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
RBM39-227ENST00000470563 ANKK1Q8NFD2 765 aa9.93□□□□□ -0.82
RBM39-227ENST00000470563 SLC27A5Q9Y2P5 690 aa9.93□□□□□ -0.82
RBM39-227ENST00000470563 ZC3H4Q9UPT8 1303 aaKnown RBP9.92□□□□□ -0.82
RBM39-227ENST00000470563 POM121CA8CG34 1229 aa9.92□□□□□ -0.82
RBM39-227ENST00000470563 PDE4CQ08493 712 aa9.92□□□□□ -0.82
RBM39-227ENST00000470563 LYPD8Q6UX82 237 aa9.92□□□□□ -0.82
RBM39-227ENST00000470563 LRRN4Q8WUT4 740 aa9.92□□□□□ -0.82
RBM39-227ENST00000470563 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
RBM39-227ENST00000470563 ADAMTS19Q8TE59 1207 aa9.91□□□□□ -0.82
RBM39-227ENST00000470563 ALG2Q9H553 416 aa9.91□□□□□ -0.82
RBM39-227ENST00000470563 THAP11Q96EK4 314 aa9.9□□□□□ -0.82
RBM39-227ENST00000470563 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
RBM39-227ENST00000470563 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
RBM39-227ENST00000470563 MSS51Q4VC12 460 aa9.88□□□□□ -0.83
RBM39-227ENST00000470563 RNF40O75150 1001 aa9.87□□□□□ -0.83
RBM39-227ENST00000470563 NR1I2O75469 434 aa9.87□□□□□ -0.83
RBM39-227ENST00000470563 F12P00748 615 aaPredicted RBP9.87□□□□□ -0.83
RBM39-227ENST00000470563 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
RBM39-227ENST00000470563 KCTD17Q8N5Z5 321 aa9.87□□□□□ -0.83
RBM39-227ENST00000470563 SYMPKQ92797 1274 aaKnown RBP9.87□□□□□ -0.83
RBM39-227ENST00000470563 PBXIP1Q96AQ6 731 aa9.87□□□□□ -0.83
RBM39-227ENST00000470563 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
RBM39-227ENST00000470563 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
RBM39-227ENST00000470563 PPP4CP60510 307 aa9.86□□□□□ -0.83
RBM39-227ENST00000470563 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
RBM39-227ENST00000470563 PTPRNQ16849 979 aa9.86□□□□□ -0.83
RBM39-227ENST00000470563 HDGFL1Q5TGJ6 251 aa9.86□□□□□ -0.83
RBM39-227ENST00000470563 NYAP1Q6ZVC0 841 aa9.86□□□□□ -0.83
RBM39-227ENST00000470563 APLP1P51693 650 aa9.85□□□□□ -0.83
RBM39-227ENST00000470563 JUNDP17535 347 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 NR6A1Q15406 480 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 PUS10Q3MIT2 529 aaKnown RBP9.84□□□□□ -0.83
RBM39-227ENST00000470563 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 EPS8L1Q8TE68 723 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 PPP1R12CQ9BZL4 782 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 PODXL2Q9NZ53 605 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 GPSM3Q9Y4H4 160 aa9.84□□□□□ -0.83
RBM39-227ENST00000470563 BLOC1S3Q6QNY0 202 aa9.83□□□□□ -0.84
RBM39-227ENST00000470563 TSC1Q92574 1164 aa9.83□□□□□ -0.84
RBM39-227ENST00000470563 GPKOWQ92917 476 aaPredicted RBP eCLIP9.83□□□□□ -0.84
RBM39-227ENST00000470563 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
RBM39-227ENST00000470563 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
RBM39-227ENST00000470563 VAC14Q08AM6 782 aa9.82□□□□□ -0.84
RBM39-227ENST00000470563 NR1H3Q13133 447 aa9.82□□□□□ -0.84
RBM39-227ENST00000470563 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
RBM39-227ENST00000470563 FKBPLQ9UIM3 349 aa9.82□□□□□ -0.84
RBM39-227ENST00000470563 MMP16P51512 607 aa9.81□□□□□ -0.84
RBM39-227ENST00000470563 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
RBM39-227ENST00000470563 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
RBM39-227ENST00000470563 NFATC2IPQ8NCF5 419 aa9.81□□□□□ -0.84
RBM39-227ENST00000470563 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
RBM39-227ENST00000470563 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
RBM39-227ENST00000470563 ZBTB7CA1YPR0 619 aa9.8□□□□□ -0.84
RBM39-227ENST00000470563 DXOO77932 396 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms