RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-205ENST00000470232 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-205ENST00000470232 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
SYNGAP1-205ENST00000470232 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
SYNGAP1-205ENST00000470232 MYOM2P54296 1465 aa13.59□□□□□ -0.23
SYNGAP1-205ENST00000470232 HFM1A2PYH4 1435 aa13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 MARF1Q9Y4F3 1742 aaKnown RBP13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 FOXO3O43524 673 aa13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 BAG6P46379 1132 aa13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
SYNGAP1-205ENST00000470232 LRP5O75197 1615 aa13.55□□□□□ -0.24
SYNGAP1-205ENST00000470232 SPHKAPQ2M3C7 1700 aa13.55□□□□□ -0.24
SYNGAP1-205ENST00000470232 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
SYNGAP1-205ENST00000470232 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
SYNGAP1-205ENST00000470232 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
SYNGAP1-205ENST00000470232 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
SYNGAP1-205ENST00000470232 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
SYNGAP1-205ENST00000470232 HRCP23327 699 aa13.53□□□□□ -0.24
SYNGAP1-205ENST00000470232 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
SYNGAP1-205ENST00000470232 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
SYNGAP1-205ENST00000470232 NEXMIFQ5QGS0 1516 aa13.53□□□□□ -0.24
SYNGAP1-205ENST00000470232 PSDA5PKW4 1024 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-205ENST00000470232 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
SYNGAP1-205ENST00000470232 VPS72Q15906 364 aa13.52□□□□□ -0.25
SYNGAP1-205ENST00000470232 PXDNQ92626 1479 aa13.52□□□□□ -0.25
SYNGAP1-205ENST00000470232 SLIT2O94813 1529 aa13.52□□□□□ -0.25
SYNGAP1-205ENST00000470232 KIF1BO60333 1816 aa13.51□□□□□ -0.25
SYNGAP1-205ENST00000470232 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
SYNGAP1-205ENST00000470232 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
SYNGAP1-205ENST00000470232 ITGAEP38570 1179 aa13.5□□□□□ -0.25
SYNGAP1-205ENST00000470232 PSME1Q06323 249 aa13.5□□□□□ -0.25
SYNGAP1-205ENST00000470232 GLI3P10071 1580 aa13.49□□□□□ -0.25
SYNGAP1-205ENST00000470232 BRWD3Q6RI45 1802 aa13.49□□□□□ -0.25
SYNGAP1-205ENST00000470232 A0A0G2JS52 829 aa13.49□□□□□ -0.25
SYNGAP1-205ENST00000470232 MYT1Q01538 1121 aa13.49□□□□□ -0.25
SYNGAP1-205ENST00000470232 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
SYNGAP1-205ENST00000470232 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
SYNGAP1-205ENST00000470232 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
SYNGAP1-205ENST00000470232 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
SYNGAP1-205ENST00000470232 CLTCL1P53675 1640 aa13.46□□□□□ -0.25
SYNGAP1-205ENST00000470232 CNKSR2Q8WXI2 1034 aa13.46□□□□□ -0.25
SYNGAP1-205ENST00000470232 NAIPQ13075 1403 aa13.45□□□□□ -0.26
SYNGAP1-205ENST00000470232 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
SYNGAP1-205ENST00000470232 YY1P25490 414 aa13.44□□□□□ -0.26
SYNGAP1-205ENST00000470232 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-205ENST00000470232 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-205ENST00000470232 STK26Q9P289 416 aa13.44□□□□□ -0.26
SYNGAP1-205ENST00000470232 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
SYNGAP1-205ENST00000470232 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
SYNGAP1-205ENST00000470232 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
SYNGAP1-205ENST00000470232 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
SYNGAP1-205ENST00000470232 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-205ENST00000470232 KIF1AQ12756 1690 aa13.41□□□□□ -0.26
SYNGAP1-205ENST00000470232 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
SYNGAP1-205ENST00000470232 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
SYNGAP1-205ENST00000470232 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
SYNGAP1-205ENST00000470232 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
SYNGAP1-205ENST00000470232 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
SYNGAP1-205ENST00000470232 FAM83GA6ND36 823 aa13.4□□□□□ -0.26
SYNGAP1-205ENST00000470232 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
SYNGAP1-205ENST00000470232 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
SYNGAP1-205ENST00000470232 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
SYNGAP1-205ENST00000470232 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
SYNGAP1-205ENST00000470232 RGPD1P0DJD0 1748 aa13.38□□□□□ -0.27
SYNGAP1-205ENST00000470232 TECPR2O15040 1411 aa13.38□□□□□ -0.27
SYNGAP1-205ENST00000470232 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
SYNGAP1-205ENST00000470232 PPLO60437 1756 aa13.37□□□□□ -0.27
SYNGAP1-205ENST00000470232 EZH2Q15910 746 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 NBPF8Q3BBV2 869 aa13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 SLC4A1APQ9BWU0 796 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
SYNGAP1-205ENST00000470232 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
SYNGAP1-205ENST00000470232 FAM196AQ6ZSG2 479 aa13.35□□□□□ -0.27
SYNGAP1-205ENST00000470232 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-205ENST00000470232 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
SYNGAP1-205ENST00000470232 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
SYNGAP1-205ENST00000470232 PARD3Q8TEW0 1356 aa13.33□□□□□ -0.27
SYNGAP1-205ENST00000470232 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.27
SYNGAP1-205ENST00000470232 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 APBA3O96018 575 aa13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 CAMKK2Q96RR4 588 aa13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
SYNGAP1-205ENST00000470232 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
SYNGAP1-205ENST00000470232 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
SYNGAP1-205ENST00000470232 TRIM37O94972 964 aa13.32□□□□□ -0.28
SYNGAP1-205ENST00000470232 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-205ENST00000470232 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
SYNGAP1-205ENST00000470232 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
SYNGAP1-205ENST00000470232 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms