RNA–Protein interactions for RNA: ENST00000469669.5

EWSR1-215, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-215ENST00000469669 GBP4Q96PP9 640 aa20.99■□□□□ 0.95
EWSR1-215ENST00000469669 TTC37Q6PGP7 1564 aa20.98■□□□□ 0.95
EWSR1-215ENST00000469669 PREX2Q70Z35 1606 aa20.98■□□□□ 0.95
EWSR1-215ENST00000469669 DDIT3P35638 169 aa20.98■□□□□ 0.95
EWSR1-215ENST00000469669 AAMPQ13685 434 aa20.98■□□□□ 0.95
EWSR1-215ENST00000469669 MVPQ14764 893 aaKnown RBP20.98■□□□□ 0.95
EWSR1-215ENST00000469669 TCP11L2Q8N4U5 519 aa20.98■□□□□ 0.95
EWSR1-215ENST00000469669 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
EWSR1-215ENST00000469669 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
EWSR1-215ENST00000469669 MYOM1P52179 1685 aa20.97■□□□□ 0.95
EWSR1-215ENST00000469669 NASPP49321 788 aaPredicted RBP20.96■□□□□ 0.95
EWSR1-215ENST00000469669 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
EWSR1-215ENST00000469669 ARHGEF5Q12774 1597 aa20.95■□□□□ 0.94
EWSR1-215ENST00000469669 MSNP26038 577 aaKnown RBP20.94■□□□□ 0.94
EWSR1-215ENST00000469669 CCDC173Q0VFZ6 552 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 ZSCAN30Q86W11 494 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 ARID3AQ99856 593 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 FAM13BQ9NYF5 915 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 NCOA3Q9Y6Q9 1424 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 RAB3GAP1Q15042 981 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 IQGAP1P46940 1657 aa20.94■□□□□ 0.94
EWSR1-215ENST00000469669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.94
EWSR1-215ENST00000469669 SYCP2Q9BX26 1530 aa20.93■□□□□ 0.94
EWSR1-215ENST00000469669 RIPK4P57078 832 aa20.92■□□□□ 0.94
EWSR1-215ENST00000469669 SKOR2Q2VWA4 1001 aaPredicted RBP20.92■□□□□ 0.94
EWSR1-215ENST00000469669 DZIP1LQ8IYY4 767 aaKnown RBP20.92■□□□□ 0.94
EWSR1-215ENST00000469669 SCAF11Q99590 1463 aaKnown RBP20.92■□□□□ 0.94
EWSR1-215ENST00000469669 SMC5Q8IY18 1101 aa20.92■□□□□ 0.94
EWSR1-215ENST00000469669 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
EWSR1-215ENST00000469669 CD2BP2O95400 341 aaKnown RBP20.91■□□□□ 0.94
EWSR1-215ENST00000469669 ZKSCAN2Q63HK3 967 aa20.91■□□□□ 0.94
EWSR1-215ENST00000469669 ANP32BQ92688 251 aaKnown RBP20.91■□□□□ 0.94
EWSR1-215ENST00000469669 R3HCC1Q9Y3T6 440 aaKnown RBP20.91■□□□□ 0.94
EWSR1-215ENST00000469669 OFD1O75665 1012 aa20.91■□□□□ 0.94
EWSR1-215ENST00000469669 ITPRIPQ8IWB1 547 aa20.91■□□□□ 0.94
EWSR1-215ENST00000469669 UNC13BO14795 1591 aa20.9■□□□□ 0.94
EWSR1-215ENST00000469669 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
EWSR1-215ENST00000469669 PPP1R9BQ96SB3 815 aa20.9■□□□□ 0.94
EWSR1-215ENST00000469669 SSFA2P28290 1259 aa20.89■□□□□ 0.93
EWSR1-215ENST00000469669 RBM25P49756 843 aaKnown RBP20.89■□□□□ 0.93
EWSR1-215ENST00000469669 SNX21Q969T3 373 aa20.89■□□□□ 0.93
EWSR1-215ENST00000469669 MADDQ8WXG6 1647 aa20.89■□□□□ 0.93
EWSR1-215ENST00000469669 CALD1Q05682 793 aaKnown RBP20.88■□□□□ 0.93
EWSR1-215ENST00000469669 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
EWSR1-215ENST00000469669 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.88■□□□□ 0.93
EWSR1-215ENST00000469669 TSR2Q969E8 191 aaKnown RBP20.88■□□□□ 0.93
EWSR1-215ENST00000469669 PODXL2Q9NZ53 605 aa20.88■□□□□ 0.93
EWSR1-215ENST00000469669 CIZ1Q9ULV3 898 aaPredicted RBP20.88■□□□□ 0.93
EWSR1-215ENST00000469669 WDR63Q8IWG1 891 aa20.87■□□□□ 0.93
EWSR1-215ENST00000469669 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
EWSR1-215ENST00000469669 LNPKQ9C0E8 428 aa20.87■□□□□ 0.93
EWSR1-215ENST00000469669 POLR3AO14802 1390 aaPredicted RBP20.87■□□□□ 0.93
EWSR1-215ENST00000469669 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
EWSR1-215ENST00000469669 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
EWSR1-215ENST00000469669 PRDM4Q9UKN5 801 aa20.86■□□□□ 0.93
EWSR1-215ENST00000469669 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
EWSR1-215ENST00000469669 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
EWSR1-215ENST00000469669 TRIM27P14373 513 aa20.85■□□□□ 0.93
EWSR1-215ENST00000469669 NCLP19338 710 aaKnown RBP20.85■□□□□ 0.93
EWSR1-215ENST00000469669 HDAC1Q13547 482 aaPredicted RBP20.84■□□□□ 0.93
EWSR1-215ENST00000469669 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
EWSR1-215ENST00000469669 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
EWSR1-215ENST00000469669 AK9Q5TCS8 1911 aa20.84■□□□□ 0.93
EWSR1-215ENST00000469669 CEP152O94986 1710 aa20.84■□□□□ 0.93
EWSR1-215ENST00000469669 KIF2CQ99661 725 aa20.83■□□□□ 0.93
EWSR1-215ENST00000469669 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
EWSR1-215ENST00000469669 GOLGA6L22H0YM25 854 aa20.83■□□□□ 0.92
EWSR1-215ENST00000469669 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
EWSR1-215ENST00000469669 ATP10AO60312 1499 aa20.82■□□□□ 0.92
EWSR1-215ENST00000469669 PTMSP20962 102 aa20.81■□□□□ 0.92
EWSR1-215ENST00000469669 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
EWSR1-215ENST00000469669 K7ELQ4 463 aaPredicted RBP20.81■□□□□ 0.92
EWSR1-215ENST00000469669 SHPRHQ149N8 1683 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 UQCRHLA0A096LP55 91 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 UQCRHP07919 91 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 CFAP70Q5T0N1 1121 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 DDX19BQ9UMR2 479 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
EWSR1-215ENST00000469669 CAVIN1Q6NZI2 390 aaKnown RBP20.8■□□□□ 0.92
EWSR1-215ENST00000469669 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
EWSR1-215ENST00000469669 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
EWSR1-215ENST00000469669 KLHL40Q2TBA0 621 aa20.79■□□□□ 0.92
EWSR1-215ENST00000469669 ERVK-7P63135 1459 aa20.79■□□□□ 0.92
EWSR1-215ENST00000469669 MTHFSP49914 203 aa20.79■□□□□ 0.92
EWSR1-215ENST00000469669 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
EWSR1-215ENST00000469669 TMEM57Q8N5G2 664 aa20.78■□□□□ 0.92
EWSR1-215ENST00000469669 SSH1Q8WYL5 1049 aa20.78■□□□□ 0.92
EWSR1-215ENST00000469669 NOB1Q9ULX3 412 aaKnown RBP20.78■□□□□ 0.92
EWSR1-215ENST00000469669 MCTP1Q6DN14 999 aa20.78■□□□□ 0.92
EWSR1-215ENST00000469669 MAST1Q9Y2H9 1570 aa20.77■□□□□ 0.92
EWSR1-215ENST00000469669 NSD3Q9BZ95 1437 aa20.76■□□□□ 0.91
EWSR1-215ENST00000469669 U2AF1L5P0DN76 240 aaPredicted RBP20.76■□□□□ 0.91
EWSR1-215ENST00000469669 U2AF1Q01081 240 aaKnown RBP eCLIP20.76■□□□□ 0.913e-11■■□□□ 12
EWSR1-215ENST00000469669 NUCB1Q02818 461 aa20.76■□□□□ 0.91
EWSR1-215ENST00000469669 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
EWSR1-215ENST00000469669 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.76■□□□□ 0.91
EWSR1-215ENST00000469669 RBSNQ9H1K0 784 aa20.75■□□□□ 0.91
EWSR1-215ENST00000469669 CHD1LQ86WJ1 897 aa20.75■□□□□ 0.91
EWSR1-215ENST00000469669 PRDM10Q9NQV6 1147 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms