RNA–Protein interactions for RNA: ENST00000469669.5

EWSR1-215, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-215ENST00000469669 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
EWSR1-215ENST00000469669 HRCP23327 699 aa28.27■■■□□ 2.12
EWSR1-215ENST00000469669 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
EWSR1-215ENST00000469669 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
EWSR1-215ENST00000469669 PPARGC1BQ86YN6 1023 aaKnown RBP27.85■■■□□ 2.05
EWSR1-215ENST00000469669 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
EWSR1-215ENST00000469669 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
EWSR1-215ENST00000469669 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
EWSR1-215ENST00000469669 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
EWSR1-215ENST00000469669 PELP1Q8IZL8 1130 aaKnown RBP27.08■■□□□ 1.93
EWSR1-215ENST00000469669 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
EWSR1-215ENST00000469669 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
EWSR1-215ENST00000469669 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
EWSR1-215ENST00000469669 TRIM26Q12899 539 aaPredicted RBP26.83■■□□□ 1.88
EWSR1-215ENST00000469669 SCAF1Q9H7N4 1312 aaKnown RBP26.79■■□□□ 1.88
EWSR1-215ENST00000469669 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
EWSR1-215ENST00000469669 ZEB1P37275 1124 aaPredicted RBP26.52■■□□□ 1.84
EWSR1-215ENST00000469669 ACIN1Q9UKV3 1341 aaKnown RBP26.1■■□□□ 1.77
EWSR1-215ENST00000469669 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
EWSR1-215ENST00000469669 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
EWSR1-215ENST00000469669 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
EWSR1-215ENST00000469669 MYT1Q01538 1121 aa25.95■■□□□ 1.74
EWSR1-215ENST00000469669 GTF3C3Q9Y5Q9 886 aa25.95■■□□□ 1.74
EWSR1-215ENST00000469669 TRIM41Q8WV44 630 aa25.89■■□□□ 1.73
EWSR1-215ENST00000469669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.83■■□□□ 1.72
EWSR1-215ENST00000469669 CENPBP07199 599 aaPredicted RBP25.75■■□□□ 1.71
EWSR1-215ENST00000469669 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
EWSR1-215ENST00000469669 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
EWSR1-215ENST00000469669 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
EWSR1-215ENST00000469669 ABCC9O60706 1549 aa25.62■■□□□ 1.69
EWSR1-215ENST00000469669 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
EWSR1-215ENST00000469669 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
EWSR1-215ENST00000469669 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
EWSR1-215ENST00000469669 TTBK1Q5TCY1 1321 aaPredicted RBP25.37■■□□□ 1.65
EWSR1-215ENST00000469669 NACADO15069 1562 aa25.31■■□□□ 1.64
EWSR1-215ENST00000469669 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
EWSR1-215ENST00000469669 MIER1Q8N108 512 aa25.08■■□□□ 1.61
EWSR1-215ENST00000469669 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
EWSR1-215ENST00000469669 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
EWSR1-215ENST00000469669 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
EWSR1-215ENST00000469669 WIZO95785 1651 aa24.79■■□□□ 1.56
EWSR1-215ENST00000469669 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
EWSR1-215ENST00000469669 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
EWSR1-215ENST00000469669 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
EWSR1-215ENST00000469669 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
EWSR1-215ENST00000469669 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
EWSR1-215ENST00000469669 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
EWSR1-215ENST00000469669 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
EWSR1-215ENST00000469669 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
EWSR1-215ENST00000469669 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
EWSR1-215ENST00000469669 ANP32EQ9BTT0 268 aa24.55■■□□□ 1.52
EWSR1-215ENST00000469669 TSHZ2Q9NRE2 1034 aa24.55■■□□□ 1.52
EWSR1-215ENST00000469669 SOGA1O94964 1423 aa24.54■■□□□ 1.52
EWSR1-215ENST00000469669 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
EWSR1-215ENST00000469669 BCL11AQ9H165 835 aa24.51■■□□□ 1.51
EWSR1-215ENST00000469669 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
EWSR1-215ENST00000469669 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.58e-9■□□□□ 10.7
EWSR1-215ENST00000469669 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
EWSR1-215ENST00000469669 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
EWSR1-215ENST00000469669 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
EWSR1-215ENST00000469669 BICRAQ9NZM4 1560 aa24.38■■□□□ 1.49
EWSR1-215ENST00000469669 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
EWSR1-215ENST00000469669 BCANQ96GW7 911 aa24.29■■□□□ 1.48
EWSR1-215ENST00000469669 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
EWSR1-215ENST00000469669 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
EWSR1-215ENST00000469669 EEA1Q15075 1411 aa24.2■■□□□ 1.46
EWSR1-215ENST00000469669 RANGAP1P46060 587 aaPredicted RBP24.19■■□□□ 1.46
EWSR1-215ENST00000469669 APLP2Q06481 763 aa24.18■■□□□ 1.46
EWSR1-215ENST00000469669 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
EWSR1-215ENST00000469669 CLIP1P30622 1438 aa24.12■■□□□ 1.45
EWSR1-215ENST00000469669 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
EWSR1-215ENST00000469669 FKBP8Q14318 412 aa24.08■■□□□ 1.44
EWSR1-215ENST00000469669 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
EWSR1-215ENST00000469669 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
EWSR1-215ENST00000469669 RBM19Q9Y4C8 960 aaKnown RBP23.98■■□□□ 1.43
EWSR1-215ENST00000469669 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
EWSR1-215ENST00000469669 ITGAEP38570 1179 aa23.91■■□□□ 1.42
EWSR1-215ENST00000469669 KIF21BO75037 1637 aa23.88■■□□□ 1.41
EWSR1-215ENST00000469669 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
EWSR1-215ENST00000469669 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
EWSR1-215ENST00000469669 NEFLP07196 543 aa23.82■■□□□ 1.4
EWSR1-215ENST00000469669 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
EWSR1-215ENST00000469669 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
EWSR1-215ENST00000469669 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
EWSR1-215ENST00000469669 MSH5O43196 834 aa23.78■■□□□ 1.4
EWSR1-215ENST00000469669 SYNJ1O43426 1573 aa23.77■■□□□ 1.4
EWSR1-215ENST00000469669 TRIM52Q96A61 297 aa23.76■■□□□ 1.39
EWSR1-215ENST00000469669 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
EWSR1-215ENST00000469669 ERICH6Q7L0X2 663 aa23.59■■□□□ 1.37
EWSR1-215ENST00000469669 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
EWSR1-215ENST00000469669 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
EWSR1-215ENST00000469669 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
EWSR1-215ENST00000469669 RAB3GAP2Q9H2M9 1393 aa23.54■■□□□ 1.36
EWSR1-215ENST00000469669 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
EWSR1-215ENST00000469669 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
EWSR1-215ENST00000469669 MAPKBP1O60336 1514 aa23.53■■□□□ 1.36
EWSR1-215ENST00000469669 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
EWSR1-215ENST00000469669 CUX2O14529 1486 aa23.52■■□□□ 1.36
EWSR1-215ENST00000469669 IRX6P78412 446 aaPredicted RBP23.52■■□□□ 1.36
EWSR1-215ENST00000469669 ANP32CO43423 234 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms