RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TECPR2O15040 1411 aa36.36■■■■□ 3.41
PTCH1-210ENST00000468211 WAPLQ7Z5K2 1190 aa36.36■■■■□ 3.41
PTCH1-210ENST00000468211 LRPPRCP42704 1394 aaKnown RBP36.36■■■■□ 3.41
PTCH1-210ENST00000468211 SOS2Q07890 1332 aaPredicted RBP36.34■■■■□ 3.41
PTCH1-210ENST00000468211 ACIN1Q9UKV3 1341 aaKnown RBP36.33■■■■□ 3.41
PTCH1-210ENST00000468211 ABCC11Q96J66 1382 aa36.31■■■■□ 3.4
PTCH1-210ENST00000468211 PLEKHH1Q9ULM0 1364 aa36.31■■■■□ 3.4
PTCH1-210ENST00000468211 AFF2P51816 1311 aa36.3■■■■□ 3.4
PTCH1-210ENST00000468211 YTHDC2Q9H6S0 1430 aaKnown RBP36.27■■■■□ 3.4
PTCH1-210ENST00000468211 NRXN1Q9ULB1 1477 aa36.27■■■■□ 3.4
PTCH1-210ENST00000468211 ESCO1Q5FWF5 840 aa36.25■■■■□ 3.39
PTCH1-210ENST00000468211 C8orf37Q96NL8 207 aa36.25■■■■□ 3.39
PTCH1-210ENST00000468211 C14orf93Q9H972 538 aaKnown RBP36.24■■■■□ 3.39
PTCH1-210ENST00000468211 MYOM2P54296 1465 aa36.24■■■■□ 3.39
PTCH1-210ENST00000468211 NUTM2FA1L443 756 aa36.23■■■■□ 3.39
PTCH1-210ENST00000468211 RXRBP28702 533 aa36.22■■■■□ 3.39
PTCH1-210ENST00000468211 FMN2Q9NZ56 1722 aa36.22■■■■□ 3.39
PTCH1-210ENST00000468211 CFAP70Q5T0N1 1121 aa36.21■■■■□ 3.39
PTCH1-210ENST00000468211 ADAMTS2O95450 1211 aa36.2■■■■□ 3.39
PTCH1-210ENST00000468211 COL22A1Q8NFW1 1626 aaPredicted RBP36.19■■■■□ 3.38
PTCH1-210ENST00000468211 PXDNQ92626 1479 aa36.19■■■■□ 3.38
PTCH1-210ENST00000468211 FOXO3O43524 673 aa36.16■■■■□ 3.38
PTCH1-210ENST00000468211 XPCQ01831 940 aaPredicted RBP36.16■■■■□ 3.38
PTCH1-210ENST00000468211 RGPD8O14715 1765 aaPredicted RBP36.15■■■■□ 3.38
PTCH1-210ENST00000468211 NPHP3Q7Z494 1330 aa36.15■■■■□ 3.38
PTCH1-210ENST00000468211 CDK12Q9NYV4 1490 aaPredicted RBP36.13■■■■□ 3.37
PTCH1-210ENST00000468211 SIRT1Q96EB6 747 aa36.13■■■■□ 3.37
PTCH1-210ENST00000468211 NGLY1Q96IV0 654 aa36.12■■■■□ 3.37
PTCH1-210ENST00000468211 QTRT2Q9H974 415 aaKnown RBP36.11■■■■□ 3.37
PTCH1-210ENST00000468211 DHX57Q6P158 1386 aaKnown RBP36.11■■■■□ 3.37
PTCH1-210ENST00000468211 UPF1Q92900 1129 aaKnown RBP eCLIP36.07■■■■□ 3.36
PTCH1-210ENST00000468211 KIF1AQ12756 1690 aa36.07■■■■□ 3.36
PTCH1-210ENST00000468211 MARF1Q9Y4F3 1742 aaKnown RBP36.05■■■■□ 3.36
PTCH1-210ENST00000468211 RGS12O14924 1447 aa36.05■■■■□ 3.36
PTCH1-210ENST00000468211 ADGRB1O14514 1584 aa36.05■■■■□ 3.36
PTCH1-210ENST00000468211 RBM6P78332 1123 aaKnown RBP36.04■■■■□ 3.36
PTCH1-210ENST00000468211 SAFB2Q14151 953 aaKnown RBP eCLIP36.04■■■■□ 3.36
PTCH1-210ENST00000468211 PRAM1Q96QH2 718 aa36.04■■■■□ 3.36
PTCH1-210ENST00000468211 DLC1Q96QB1 1528 aa36.02■■■■□ 3.36
PTCH1-210ENST00000468211 HRCP23327 699 aa36■■■■□ 3.35
PTCH1-210ENST00000468211 USP21Q9UK80 565 aa36■■■■□ 3.35
PTCH1-210ENST00000468211 KDM2AQ9Y2K7 1162 aa36■■■■□ 3.35
PTCH1-210ENST00000468211 FNBP4Q8N3X1 1017 aaPredicted RBP35.99■■■■□ 3.35
PTCH1-210ENST00000468211 DCAF11Q8TEB1 546 aa35.98■■■■□ 3.35
PTCH1-210ENST00000468211 USP32Q8NFA0 1604 aa35.97■■■■□ 3.35
PTCH1-210ENST00000468211 SPATA31A3Q5VYP0 1347 aa35.95■■■■□ 3.35
PTCH1-210ENST00000468211 KRT28Q7Z3Y7 464 aa35.94■■■■□ 3.34
PTCH1-210ENST00000468211 POGKQ9P215 609 aa35.94■■■■□ 3.34
PTCH1-210ENST00000468211 PHF8Q9UPP1 1060 aa35.94■■■■□ 3.34
PTCH1-210ENST00000468211 TRAK1Q9UPV9 953 aa35.93■■■■□ 3.34
PTCH1-210ENST00000468211 ADGRB2O60241 1585 aa35.93■■■■□ 3.34
PTCH1-210ENST00000468211 ATRNO75882 1429 aa35.92■■■■□ 3.34
PTCH1-210ENST00000468211 TRPC5Q9UL62 973 aaPredicted RBP35.91■■■■□ 3.34
PTCH1-210ENST00000468211 BCL9LQ86UU0 1499 aa35.91■■■■□ 3.34
PTCH1-210ENST00000468211 HIRIP3Q9BW71 556 aaPredicted RBP35.86■■■■□ 3.33
PTCH1-210ENST00000468211 TNS3Q68CZ2 1445 aa35.84■■■■□ 3.33
PTCH1-210ENST00000468211 ANKARQ7Z5J8 1434 aa35.84■■■■□ 3.33
PTCH1-210ENST00000468211 MINK1Q8N4C8 1332 aaPredicted RBP35.83■■■■□ 3.33
PTCH1-210ENST00000468211 PMFBP1Q8TBY8 1022 aa35.82■■■■□ 3.32
PTCH1-210ENST00000468211 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.82■■■■□ 3.32
PTCH1-210ENST00000468211 ARHGEF28Q8N1W1 1705 aaKnown RBP35.81■■■■□ 3.32
PTCH1-210ENST00000468211 ABCA3Q99758 1704 aa35.81■■■■□ 3.32
PTCH1-210ENST00000468211 STAC3Q96MF2 364 aa35.81■■■■□ 3.32
PTCH1-210ENST00000468211 PSME1Q06323 249 aa35.8■■■■□ 3.32
PTCH1-210ENST00000468211 CABLES1Q8TDN4 633 aa35.8■■■■□ 3.32
PTCH1-210ENST00000468211 PRR36Q9H6K5 1346 aa35.79■■■■□ 3.32
PTCH1-210ENST00000468211 SLIT2O94813 1529 aa35.78■■■■□ 3.32
PTCH1-210ENST00000468211 SBNO1A3KN83 1393 aa35.78■■■■□ 3.32
PTCH1-210ENST00000468211 PLEKHG5O94827 1062 aa35.77■■■■□ 3.32
PTCH1-210ENST00000468211 TRPM3Q9HCF6 1732 aaPredicted RBP35.77■■■■□ 3.32
PTCH1-210ENST00000468211 TULP4Q9NRJ4 1543 aa35.75■■■■□ 3.31
PTCH1-210ENST00000468211 WASLO00401 505 aaPredicted RBP35.73■■■■□ 3.31
PTCH1-210ENST00000468211 LMOD2Q6P5Q4 547 aa35.73■■■■□ 3.31
PTCH1-210ENST00000468211 GJD4Q96KN9 370 aaPredicted RBP35.73■■■■□ 3.31
PTCH1-210ENST00000468211 GLI3P10071 1580 aa35.72■■■■□ 3.31
PTCH1-210ENST00000468211 UNC5CLQ8IV45 518 aa35.71■■■■□ 3.31
PTCH1-210ENST00000468211 PLCH1Q4KWH8 1693 aa35.71■■■■□ 3.31
PTCH1-210ENST00000468211 ATAD2Q6PL18 1390 aa35.7■■■■□ 3.31
PTCH1-210ENST00000468211 ALS2Q96Q42 1657 aa35.69■■■■□ 3.3
PTCH1-210ENST00000468211 ARHGEF10O15013 1369 aa35.69■■■■□ 3.3
PTCH1-210ENST00000468211 HAP1P54257 671 aaPredicted RBP35.69■■■■□ 3.3
PTCH1-210ENST00000468211 KIAA1210Q9ULL0 1709 aa35.68■■■■□ 3.3
PTCH1-210ENST00000468211 RALGAPBQ86X10 1494 aa35.67■■■■□ 3.3
PTCH1-210ENST00000468211 EIF3AQ14152 1382 aaKnown RBP35.67■■■■□ 3.3
PTCH1-210ENST00000468211 EP400Q96L91 3159 aa35.65■■■■□ 3.3
PTCH1-210ENST00000468211 NWD2Q9ULI1 1742 aa35.65■■■■□ 3.3
PTCH1-210ENST00000468211 ITSN1Q15811 1721 aa35.63■■■■□ 3.29
PTCH1-210ENST00000468211 BRWD3Q6RI45 1802 aa35.62■■■■□ 3.29
PTCH1-210ENST00000468211 GPRASP1Q5JY77 1395 aa35.62■■■■□ 3.29
PTCH1-210ENST00000468211 ATP7BP35670 1465 aa35.61■■■■□ 3.29
PTCH1-210ENST00000468211 NBPF1Q3BBV0 1214 aa35.59■■■■□ 3.29
PTCH1-210ENST00000468211 CRYBG1Q9Y4K1 1723 aa35.59■■■■□ 3.29
PTCH1-210ENST00000468211 FAM83GA6ND36 823 aa35.58■■■■□ 3.29
PTCH1-210ENST00000468211 NGDNQ8NEJ9 315 aaKnown RBP35.57■■■■□ 3.28
PTCH1-210ENST00000468211 NUDT16Q96DE0 195 aaKnown RBP35.57■■■■□ 3.28
PTCH1-210ENST00000468211 VPS72Q15906 364 aa35.55■■■■□ 3.28
PTCH1-210ENST00000468211 NRAPQ86VF7 1730 aa35.54■■■■□ 3.28
PTCH1-210ENST00000468211 TOPAZ1Q8N9V7 1692 aa35.54■■■■□ 3.28
PTCH1-210ENST00000468211 CDK19Q9BWU1 502 aa35.54■■■■□ 3.28
PTCH1-210ENST00000468211 PAK3O75914 559 aaPredicted RBP35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms