RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ORAI2Q96SN7 254 aa16.04■□□□□ 0.16
HDAC3-203ENST00000467533 HRCP23327 699 aa16■□□□□ 0.15
HDAC3-203ENST00000467533 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
HDAC3-203ENST00000467533 PXDNQ92626 1479 aa15.98■□□□□ 0.15
HDAC3-203ENST00000467533 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
HDAC3-203ENST00000467533 UNC5CLQ8IV45 518 aa15.97■□□□□ 0.15
HDAC3-203ENST00000467533 SLIT2O94813 1529 aa15.97■□□□□ 0.15
HDAC3-203ENST00000467533 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
HDAC3-203ENST00000467533 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
HDAC3-203ENST00000467533 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
HDAC3-203ENST00000467533 BAG6P46379 1132 aa15.95■□□□□ 0.14
HDAC3-203ENST00000467533 APLP2Q06481 763 aa15.95■□□□□ 0.14
HDAC3-203ENST00000467533 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
HDAC3-203ENST00000467533 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
HDAC3-203ENST00000467533 YY1P25490 414 aa15.94■□□□□ 0.14
HDAC3-203ENST00000467533 CDC42BPGQ6DT37 1551 aa15.94■□□□□ 0.14
HDAC3-203ENST00000467533 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
HDAC3-203ENST00000467533 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
HDAC3-203ENST00000467533 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
HDAC3-203ENST00000467533 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
HDAC3-203ENST00000467533 ESCO1Q5FWF5 840 aa15.92■□□□□ 0.14
HDAC3-203ENST00000467533 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
HDAC3-203ENST00000467533 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
HDAC3-203ENST00000467533 KIF1BO60333 1816 aa15.9■□□□□ 0.14
HDAC3-203ENST00000467533 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
HDAC3-203ENST00000467533 NUP155O75694 1391 aa15.89■□□□□ 0.13
HDAC3-203ENST00000467533 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
HDAC3-203ENST00000467533 HFM1A2PYH4 1435 aa15.89■□□□□ 0.13
HDAC3-203ENST00000467533 A0A0G2JS52 829 aa15.89■□□□□ 0.13
HDAC3-203ENST00000467533 MYT1Q01538 1121 aa15.89■□□□□ 0.13
HDAC3-203ENST00000467533 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
HDAC3-203ENST00000467533 PRAG1Q86YV5 1406 aa15.88■□□□□ 0.13
HDAC3-203ENST00000467533 FOXO3O43524 673 aa15.88■□□□□ 0.13
HDAC3-203ENST00000467533 KIF1AQ12756 1690 aa15.87■□□□□ 0.13
HDAC3-203ENST00000467533 VPS72Q15906 364 aa15.87■□□□□ 0.13
HDAC3-203ENST00000467533 ABCA3Q99758 1704 aa15.87■□□□□ 0.13
HDAC3-203ENST00000467533 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
HDAC3-203ENST00000467533 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
HDAC3-203ENST00000467533 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
HDAC3-203ENST00000467533 ADGRB2O60241 1585 aa15.83■□□□□ 0.13
HDAC3-203ENST00000467533 NRAPQ86VF7 1730 aa15.83■□□□□ 0.13
HDAC3-203ENST00000467533 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.12
HDAC3-203ENST00000467533 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.12
HDAC3-203ENST00000467533 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
HDAC3-203ENST00000467533 ONECUT3O60422 494 aaPredicted RBP15.82■□□□□ 0.12
HDAC3-203ENST00000467533 NAIPQ13075 1403 aa15.82■□□□□ 0.12
HDAC3-203ENST00000467533 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
HDAC3-203ENST00000467533 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
HDAC3-203ENST00000467533 ROCK1Q13464 1354 aa15.81■□□□□ 0.12
HDAC3-203ENST00000467533 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
HDAC3-203ENST00000467533 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
HDAC3-203ENST00000467533 PPLO60437 1756 aa15.78■□□□□ 0.12
HDAC3-203ENST00000467533 FAM98CQ17RN3 349 aaKnown RBP15.78■□□□□ 0.12
HDAC3-203ENST00000467533 VGFO15240 615 aaPredicted RBP15.77■□□□□ 0.12
HDAC3-203ENST00000467533 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.12
HDAC3-203ENST00000467533 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
HDAC3-203ENST00000467533 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
HDAC3-203ENST00000467533 EZH2Q15910 746 aaKnown RBP15.76■□□□□ 0.11
HDAC3-203ENST00000467533 FAM182BQ5T319 152 aa15.76■□□□□ 0.11
HDAC3-203ENST00000467533 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
HDAC3-203ENST00000467533 RREB1Q92766 1687 aa15.76■□□□□ 0.11
HDAC3-203ENST00000467533 NUP188Q5SRE5 1749 aa15.75■□□□□ 0.11
HDAC3-203ENST00000467533 KNDC1Q76NI1 1749 aa15.75■□□□□ 0.11
HDAC3-203ENST00000467533 KRT28Q7Z3Y7 464 aa15.75■□□□□ 0.11
HDAC3-203ENST00000467533 THSD7AQ9UPZ6 1657 aa15.75■□□□□ 0.11
HDAC3-203ENST00000467533 RGPD8O14715 1765 aaPredicted RBP15.75■□□□□ 0.11
HDAC3-203ENST00000467533 PPP1R1BQ9UD71 204 aaPredicted RBP15.74■□□□□ 0.11
HDAC3-203ENST00000467533 CAMTA1Q9Y6Y1 1673 aa15.73■□□□□ 0.11
HDAC3-203ENST00000467533 COL14A1Q05707 1796 aaKnown RBP15.73■□□□□ 0.11
HDAC3-203ENST00000467533 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
HDAC3-203ENST00000467533 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
HDAC3-203ENST00000467533 TECPR2O15040 1411 aa15.7■□□□□ 0.1
HDAC3-203ENST00000467533 PSME1Q06323 249 aa15.7■□□□□ 0.1
HDAC3-203ENST00000467533 WAPLQ7Z5K2 1190 aa15.7■□□□□ 0.1
HDAC3-203ENST00000467533 PARD3Q8TEW0 1356 aa15.7■□□□□ 0.1
HDAC3-203ENST00000467533 NINLQ9Y2I6 1382 aa15.7■□□□□ 0.1
HDAC3-203ENST00000467533 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
HDAC3-203ENST00000467533 FAM83GA6ND36 823 aa15.69■□□□□ 0.1
HDAC3-203ENST00000467533 CAMKK2Q96RR4 588 aa15.69■□□□□ 0.1
HDAC3-203ENST00000467533 BTG4Q9NY30 223 aa15.69■□□□□ 0.1
HDAC3-203ENST00000467533 STK26Q9P289 416 aa15.69■□□□□ 0.1
HDAC3-203ENST00000467533 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
HDAC3-203ENST00000467533 PLEKHH1Q9ULM0 1364 aa15.68■□□□□ 0.1
HDAC3-203ENST00000467533 ITGAEP38570 1179 aa15.68■□□□□ 0.1
HDAC3-203ENST00000467533 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
HDAC3-203ENST00000467533 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
HDAC3-203ENST00000467533 NRXN1Q9ULB1 1477 aa15.67■□□□□ 0.1
HDAC3-203ENST00000467533 TRIM37O94972 964 aa15.67■□□□□ 0.1
HDAC3-203ENST00000467533 PHF8Q9UPP1 1060 aa15.67■□□□□ 0.1
HDAC3-203ENST00000467533 APBA3O96018 575 aa15.66■□□□□ 0.1
HDAC3-203ENST00000467533 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
HDAC3-203ENST00000467533 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
HDAC3-203ENST00000467533 NBPF14Q5TI25 921 aa15.65■□□□□ 0.1
HDAC3-203ENST00000467533 SPATA31A5Q5VU36 1347 aa15.65■□□□□ 0.1
HDAC3-203ENST00000467533 SPATA31A7Q8IWB4 1347 aa15.65■□□□□ 0.1
HDAC3-203ENST00000467533 TRPM3Q9HCF6 1732 aaPredicted RBP15.64■□□□□ 0.09
HDAC3-203ENST00000467533 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
HDAC3-203ENST00000467533 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
HDAC3-203ENST00000467533 FAM196AQ6ZSG2 479 aa15.63■□□□□ 0.09
HDAC3-203ENST00000467533 ZNF784Q8NCA9 323 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms