RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 LAMC1P11047 1609 aa28.02■■■□□ 2.08
USP11-205ENST00000467378 C1orf167Q5SNV9 1468 aa28.01■■■□□ 2.07
USP11-205ENST00000467378 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
USP11-205ENST00000467378 ATRNO75882 1429 aa27.98■■■□□ 2.07
USP11-205ENST00000467378 PTCH1Q13635 1447 aa27.98■■■□□ 2.07
USP11-205ENST00000467378 FNBP4Q8N3X1 1017 aaPredicted RBP27.96■■■□□ 2.07
USP11-205ENST00000467378 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
USP11-205ENST00000467378 CCDC125Q86Z20 511 aa27.95■■■□□ 2.06
USP11-205ENST00000467378 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.06
USP11-205ENST00000467378 ORAI2Q96SN7 254 aa27.94■■■□□ 2.06
USP11-205ENST00000467378 COL22A1Q8NFW1 1626 aaPredicted RBP27.93■■■□□ 2.06
USP11-205ENST00000467378 SPATA31E1Q6ZUB1 1445 aa27.92■■■□□ 2.06
USP11-205ENST00000467378 NEXMIFQ5QGS0 1516 aa27.89■■■□□ 2.06
USP11-205ENST00000467378 PPLO60437 1756 aa27.88■■■□□ 2.05
USP11-205ENST00000467378 IFT172Q9UG01 1749 aa27.86■■■□□ 2.05
USP11-205ENST00000467378 EP400Q96L91 3159 aa27.85■■■□□ 2.05
USP11-205ENST00000467378 RPGRIP1LQ68CZ1 1315 aa27.85■■■□□ 2.05
USP11-205ENST00000467378 BCL9LQ86UU0 1499 aa27.84■■■□□ 2.05
USP11-205ENST00000467378 RGL3Q3MIN7 710 aa27.84■■■□□ 2.05
USP11-205ENST00000467378 MYOM2P54296 1465 aa27.83■■■□□ 2.04
USP11-205ENST00000467378 GJD4Q96KN9 370 aaPredicted RBP27.82■■■□□ 2.04
USP11-205ENST00000467378 ROBO2Q9HCK4 1378 aa27.81■■■□□ 2.04
USP11-205ENST00000467378 BRWD3Q6RI45 1802 aa27.81■■■□□ 2.04
USP11-205ENST00000467378 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.8■■■□□ 2.04
USP11-205ENST00000467378 BLMP54132 1417 aaPredicted RBP27.78■■■□□ 2.04
USP11-205ENST00000467378 NPHP3Q7Z494 1330 aa27.77■■■□□ 2.04
USP11-205ENST00000467378 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
USP11-205ENST00000467378 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.03
USP11-205ENST00000467378 ESCO1Q5FWF5 840 aa27.76■■■□□ 2.03
USP11-205ENST00000467378 DEFB132Q7Z7B7 95 aa27.74■■■□□ 2.03
USP11-205ENST00000467378 PXDNQ92626 1479 aa27.74■■■□□ 2.03
USP11-205ENST00000467378 LRP5O75197 1615 aa27.74■■■□□ 2.03
USP11-205ENST00000467378 GLI3P10071 1580 aa27.73■■■□□ 2.03
USP11-205ENST00000467378 XPCQ01831 940 aaPredicted RBP27.73■■■□□ 2.03
USP11-205ENST00000467378 SF3B2Q13435 895 aaKnown RBP27.72■■■□□ 2.03
USP11-205ENST00000467378 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
USP11-205ENST00000467378 FOXO3O43524 673 aa27.7■■■□□ 2.02
USP11-205ENST00000467378 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
USP11-205ENST00000467378 CDC42BPGQ6DT37 1551 aa27.69■■■□□ 2.02
USP11-205ENST00000467378 UNC5CLQ8IV45 518 aa27.69■■■□□ 2.02
USP11-205ENST00000467378 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
USP11-205ENST00000467378 PRAG1Q86YV5 1406 aa27.67■■■□□ 2.02
USP11-205ENST00000467378 DCAF11Q8TEB1 546 aa27.65■■■□□ 2.02
USP11-205ENST00000467378 SLIT2O94813 1529 aa27.65■■■□□ 2.02
USP11-205ENST00000467378 NRXN1Q9ULB1 1477 aa27.64■■■□□ 2.02
USP11-205ENST00000467378 LRPPRCP42704 1394 aaKnown RBP27.64■■■□□ 2.02
USP11-205ENST00000467378 STAC3Q96MF2 364 aa27.63■■■□□ 2.01
USP11-205ENST00000467378 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
USP11-205ENST00000467378 PIK3C2GO75747 1445 aa27.61■■■□□ 2.01
USP11-205ENST00000467378 USP32Q8NFA0 1604 aa27.61■■■□□ 2.01
USP11-205ENST00000467378 SEPT12Q8IYM1 358 aa27.61■■■□□ 2.01
USP11-205ENST00000467378 KDM2AQ9Y2K7 1162 aa27.61■■■□□ 2.01
USP11-205ENST00000467378 CLSPNQ9HAW4 1339 aa27.6■■■□□ 2.01
USP11-205ENST00000467378 L3MBTL2Q969R5 705 aa27.59■■■□□ 2.01
USP11-205ENST00000467378 PSDA5PKW4 1024 aaPredicted RBP27.58■■■□□ 2.01
USP11-205ENST00000467378 PLCH1Q4KWH8 1693 aa27.57■■■□□ 2
USP11-205ENST00000467378 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
USP11-205ENST00000467378 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
USP11-205ENST00000467378 CCDC9Q9Y3X0 531 aaKnown RBP27.56■■■□□ 2
USP11-205ENST00000467378 SPATA31A3Q5VYP0 1347 aa27.56■■■□□ 2
USP11-205ENST00000467378 KIF1AQ12756 1690 aa27.56■■■□□ 2
USP11-205ENST00000467378 NWD2Q9ULI1 1742 aa27.55■■■□□ 2
USP11-205ENST00000467378 C14orf93Q9H972 538 aaKnown RBP27.54■■■□□ 2
USP11-205ENST00000467378 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
USP11-205ENST00000467378 KRT27Q7Z3Y8 459 aa27.53■■■□□ 2
USP11-205ENST00000467378 VPS72Q15906 364 aa27.52■■■□□ 2
USP11-205ENST00000467378 RGPD8O14715 1765 aaPredicted RBP27.51■■□□□ 1.99
USP11-205ENST00000467378 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
USP11-205ENST00000467378 BAG6P46379 1132 aa27.51■■□□□ 1.99
USP11-205ENST00000467378 CFAP70Q5T0N1 1121 aa27.51■■□□□ 1.99
USP11-205ENST00000467378 WAPLQ7Z5K2 1190 aa27.51■■□□□ 1.99
USP11-205ENST00000467378 STK26Q9P289 416 aa27.51■■□□□ 1.99
USP11-205ENST00000467378 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
USP11-205ENST00000467378 A0A0G2JS52 829 aa27.49■■□□□ 1.99
USP11-205ENST00000467378 MYT1Q01538 1121 aa27.49■■□□□ 1.99
USP11-205ENST00000467378 TONSLQ96HA7 1378 aa27.48■■□□□ 1.99
USP11-205ENST00000467378 ABCA3Q99758 1704 aa27.47■■□□□ 1.99
USP11-205ENST00000467378 KIAA1210Q9ULL0 1709 aa27.47■■□□□ 1.99
USP11-205ENST00000467378 CABLES1Q8TDN4 633 aa27.47■■□□□ 1.99
USP11-205ENST00000467378 ONECUT3O60422 494 aaPredicted RBP27.46■■□□□ 1.99
USP11-205ENST00000467378 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.99
USP11-205ENST00000467378 RGPD1P0DJD0 1748 aa27.44■■□□□ 1.98
USP11-205ENST00000467378 TMEM132EQ6IEE7 984 aa27.44■■□□□ 1.98
USP11-205ENST00000467378 TNS3Q68CZ2 1445 aa27.43■■□□□ 1.98
USP11-205ENST00000467378 TECPR2O15040 1411 aa27.42■■□□□ 1.98
USP11-205ENST00000467378 PLEKHH1Q9ULM0 1364 aa27.42■■□□□ 1.98
USP11-205ENST00000467378 ADGRB1O14514 1584 aa27.42■■□□□ 1.98
USP11-205ENST00000467378 PSME1Q06323 249 aa27.41■■□□□ 1.98
USP11-205ENST00000467378 LMOD2Q6P5Q4 547 aa27.41■■□□□ 1.98
USP11-205ENST00000467378 EN1Q05925 392 aaPredicted RBP27.39■■□□□ 1.98
USP11-205ENST00000467378 TIMELESSQ9UNS1 1208 aa27.39■■□□□ 1.98
USP11-205ENST00000467378 YTHDC2Q9H6S0 1430 aaKnown RBP27.39■■□□□ 1.97
USP11-205ENST00000467378 TRPM1Q7Z4N2 1603 aa27.38■■□□□ 1.97
USP11-205ENST00000467378 NRAPQ86VF7 1730 aa27.38■■□□□ 1.97
USP11-205ENST00000467378 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
USP11-205ENST00000467378 FAM98CQ17RN3 349 aaKnown RBP27.37■■□□□ 1.97
USP11-205ENST00000467378 NBPF8Q3BBV2 869 aa27.37■■□□□ 1.97
USP11-205ENST00000467378 PHF8Q9UPP1 1060 aa27.37■■□□□ 1.97
USP11-205ENST00000467378 ABCC11Q96J66 1382 aa27.36■■□□□ 1.97
USP11-205ENST00000467378 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms