RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 POGKQ9P215 609 aa12.9□□□□□ -0.34
PRPF3-202ENST00000467329 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
PRPF3-202ENST00000467329 PTCH1Q13635 1447 aa12.89□□□□□ -0.35
PRPF3-202ENST00000467329 XRN1Q8IZH2 1706 aaKnown RBP12.89□□□□□ -0.35
PRPF3-202ENST00000467329 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
PRPF3-202ENST00000467329 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
PRPF3-202ENST00000467329 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
PRPF3-202ENST00000467329 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
PRPF3-202ENST00000467329 BCANQ96GW7 911 aa12.87□□□□□ -0.35
PRPF3-202ENST00000467329 ANKRD36BQ8N2N9 1353 aa12.86□□□□□ -0.35
PRPF3-202ENST00000467329 ANKLE2Q86XL3 938 aa12.86□□□□□ -0.35
PRPF3-202ENST00000467329 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
PRPF3-202ENST00000467329 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
PRPF3-202ENST00000467329 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
PRPF3-202ENST00000467329 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
PRPF3-202ENST00000467329 MINK1Q8N4C8 1332 aaPredicted RBP12.85□□□□□ -0.35
PRPF3-202ENST00000467329 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
PRPF3-202ENST00000467329 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
PRPF3-202ENST00000467329 NLRP13Q86W25 1043 aa12.84□□□□□ -0.35
PRPF3-202ENST00000467329 NSD2O96028 1365 aa12.83□□□□□ -0.36
PRPF3-202ENST00000467329 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PRPF3-202ENST00000467329 SENP3Q9H4L4 574 aaPredicted RBP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 SAFB2Q14151 953 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
PRPF3-202ENST00000467329 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
PRPF3-202ENST00000467329 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
PRPF3-202ENST00000467329 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
PRPF3-202ENST00000467329 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
PRPF3-202ENST00000467329 INSRP06213 1382 aa12.81□□□□□ -0.36
PRPF3-202ENST00000467329 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
PRPF3-202ENST00000467329 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-202ENST00000467329 SLC26A8Q96RN1 970 aa12.81□□□□□ -0.36
PRPF3-202ENST00000467329 CCDC184Q52MB2 194 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 NWD1Q149M9 1564 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
PRPF3-202ENST00000467329 CC2D1BQ5T0F9 858 aaKnown RBP12.79□□□□□ -0.36
PRPF3-202ENST00000467329 AMOTL2Q9Y2J4 779 aa12.79□□□□□ -0.36
PRPF3-202ENST00000467329 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
PRPF3-202ENST00000467329 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
PRPF3-202ENST00000467329 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
PRPF3-202ENST00000467329 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
PRPF3-202ENST00000467329 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
PRPF3-202ENST00000467329 HDGFL2Q7Z4V5 671 aaPredicted RBP12.76□□□□□ -0.37
PRPF3-202ENST00000467329 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
PRPF3-202ENST00000467329 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
PRPF3-202ENST00000467329 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
PRPF3-202ENST00000467329 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
PRPF3-202ENST00000467329 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
PRPF3-202ENST00000467329 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
PRPF3-202ENST00000467329 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
PRPF3-202ENST00000467329 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
PRPF3-202ENST00000467329 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
PRPF3-202ENST00000467329 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
PRPF3-202ENST00000467329 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
PRPF3-202ENST00000467329 CCDC61Q9Y6R9 512 aa12.74□□□□□ -0.37
PRPF3-202ENST00000467329 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
PRPF3-202ENST00000467329 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
PRPF3-202ENST00000467329 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
PRPF3-202ENST00000467329 CABP1Q9NZU7 370 aa12.73□□□□□ -0.37
PRPF3-202ENST00000467329 KCNA6P17658 529 aa12.72□□□□□ -0.37
PRPF3-202ENST00000467329 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
PRPF3-202ENST00000467329 NALCNQ8IZF0 1738 aa12.71□□□□□ -0.37
PRPF3-202ENST00000467329 PRR36Q9H6K5 1346 aa12.71□□□□□ -0.37
PRPF3-202ENST00000467329 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
PRPF3-202ENST00000467329 MORC1Q86VD1 984 aa12.71□□□□□ -0.37
PRPF3-202ENST00000467329 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.38
PRPF3-202ENST00000467329 NRKQ7Z2Y5 1582 aa12.71□□□□□ -0.38
PRPF3-202ENST00000467329 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.38
PRPF3-202ENST00000467329 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.38
PRPF3-202ENST00000467329 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.38
PRPF3-202ENST00000467329 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
PRPF3-202ENST00000467329 LMTK3Q96Q04 1460 aa12.7□□□□□ -0.38
PRPF3-202ENST00000467329 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
PRPF3-202ENST00000467329 HNRNPUQ00839 825 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF3-202ENST00000467329 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
PRPF3-202ENST00000467329 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
PRPF3-202ENST00000467329 FYB1O15117 783 aa12.67□□□□□ -0.38
PRPF3-202ENST00000467329 USP6P35125 1406 aa12.65□□□□□ -0.38
PRPF3-202ENST00000467329 SSH2Q76I76 1423 aa12.65□□□□□ -0.38
PRPF3-202ENST00000467329 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
PRPF3-202ENST00000467329 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
PRPF3-202ENST00000467329 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
PRPF3-202ENST00000467329 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRPF3-202ENST00000467329 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
PRPF3-202ENST00000467329 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
PRPF3-202ENST00000467329 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
PRPF3-202ENST00000467329 ACEP12821 1306 aa12.63□□□□□ -0.39
PRPF3-202ENST00000467329 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
PRPF3-202ENST00000467329 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
PRPF3-202ENST00000467329 DCCP43146 1447 aa12.63□□□□□ -0.39
PRPF3-202ENST00000467329 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
PRPF3-202ENST00000467329 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
PRPF3-202ENST00000467329 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms