RNA–Protein interactions for RNA: ENST00000466451.1

SEC61A2-211, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 427 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-211ENST00000466451 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
SEC61A2-211ENST00000466451 HPS1Q92902 700 aa9.48□□□□□ -0.89
SEC61A2-211ENST00000466451 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
SEC61A2-211ENST00000466451 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
SEC61A2-211ENST00000466451 FECHP22830 423 aa9.46□□□□□ -0.9
SEC61A2-211ENST00000466451 GMPRP36959 345 aa9.46□□□□□ -0.9
SEC61A2-211ENST00000466451 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
SEC61A2-211ENST00000466451 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
SEC61A2-211ENST00000466451 NXF1Q9UBU9 619 aaKnown RBP9.45□□□□□ -0.9
SEC61A2-211ENST00000466451 LORP23490 312 aaPredicted RBP9.44□□□□□ -0.9
SEC61A2-211ENST00000466451 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
SEC61A2-211ENST00000466451 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
SEC61A2-211ENST00000466451 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
SEC61A2-211ENST00000466451 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
SEC61A2-211ENST00000466451 IRF7Q92985 503 aa9.42□□□□□ -0.9
SEC61A2-211ENST00000466451 GCGRP47871 477 aa9.41□□□□□ -0.9
SEC61A2-211ENST00000466451 HIC1Q14526 733 aa9.4□□□□□ -0.9
SEC61A2-211ENST00000466451 MMP16P51512 607 aa9.39□□□□□ -0.91
SEC61A2-211ENST00000466451 VEGFBP49765 207 aa9.38□□□□□ -0.91
SEC61A2-211ENST00000466451 SUZ12Q15022 739 aaKnown RBP9.38□□□□□ -0.91
SEC61A2-211ENST00000466451 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
SEC61A2-211ENST00000466451 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
SEC61A2-211ENST00000466451 BMP1P13497 986 aa9.37□□□□□ -0.91
SEC61A2-211ENST00000466451 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
SEC61A2-211ENST00000466451 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
SEC61A2-211ENST00000466451 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
SEC61A2-211ENST00000466451 GRIPAP1Q4V328 841 aa9.36□□□□□ -0.91
SEC61A2-211ENST00000466451 SKOR1P84550 965 aa9.35□□□□□ -0.91
SEC61A2-211ENST00000466451 Q3C1V9 767 aa9.35□□□□□ -0.91
SEC61A2-211ENST00000466451 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
SEC61A2-211ENST00000466451 H3BM21 787 aa9.34□□□□□ -0.91
SEC61A2-211ENST00000466451 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
SEC61A2-211ENST00000466451 WNT7BP56706 349 aa9.33□□□□□ -0.92
SEC61A2-211ENST00000466451 CCDC24Q8N4L8 307 aa9.33□□□□□ -0.92
SEC61A2-211ENST00000466451 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
SEC61A2-211ENST00000466451 SEMA3EO15041 775 aa9.31□□□□□ -0.92
SEC61A2-211ENST00000466451 GNPATO15228 680 aa9.31□□□□□ -0.92
SEC61A2-211ENST00000466451 USB1Q9BQ65 265 aaKnown RBP9.31□□□□□ -0.92
SEC61A2-211ENST00000466451 CAPN5O15484 640 aaPredicted RBP9.29□□□□□ -0.92
SEC61A2-211ENST00000466451 AMER1Q5JTC6 1135 aaPredicted RBP9.28□□□□□ -0.92
SEC61A2-211ENST00000466451 PHOX2BQ99453 314 aa9.28□□□□□ -0.92
SEC61A2-211ENST00000466451 WASF2Q9Y6W5 498 aa9.27□□□□□ -0.93
SEC61A2-211ENST00000466451 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
SEC61A2-211ENST00000466451 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
SEC61A2-211ENST00000466451 SIAH2O43255 324 aa9.24□□□□□ -0.93
SEC61A2-211ENST00000466451 ZFP42Q96MM3 310 aa9.24□□□□□ -0.93
SEC61A2-211ENST00000466451 GPR37O15354 613 aa9.23□□□□□ -0.93
SEC61A2-211ENST00000466451 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
SEC61A2-211ENST00000466451 KCTD17Q8N5Z5 321 aa9.21□□□□□ -0.94
SEC61A2-211ENST00000466451 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
SEC61A2-211ENST00000466451 KDM4AO75164 1064 aa9.2□□□□□ -0.94
SEC61A2-211ENST00000466451 CD46P15529 392 aa9.2□□□□□ -0.94
SEC61A2-211ENST00000466451 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
SEC61A2-211ENST00000466451 HLA-CQ95604 372 aa9.2□□□□□ -0.94
SEC61A2-211ENST00000466451 JUNDP17535 347 aa9.19□□□□□ -0.94
SEC61A2-211ENST00000466451 VSIG8P0DPA2 414 aa9.18□□□□□ -0.94
SEC61A2-211ENST00000466451 GSK3AP49840 483 aa9.17□□□□□ -0.94
SEC61A2-211ENST00000466451 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
SEC61A2-211ENST00000466451 PTCRAQ6ISU1 281 aaPredicted RBP9.16□□□□□ -0.94
SEC61A2-211ENST00000466451 SOBPA7XYQ1 873 aa9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 USP46P62068 366 aa9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 SCARF1Q14162 830 aa9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 MRPL14Q6P1L8 145 aaKnown RBP9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 PURBQ96QR8 312 aaKnown RBP9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 TLL2Q9Y6L7 1015 aa9.15□□□□□ -0.94
SEC61A2-211ENST00000466451 TESPA1A2RU30 521 aaPredicted RBP9.14□□□□□ -0.95
SEC61A2-211ENST00000466451 HOXA2O43364 376 aa9.14□□□□□ -0.95
SEC61A2-211ENST00000466451 SH3BP2P78314 561 aa9.14□□□□□ -0.95
SEC61A2-211ENST00000466451 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
SEC61A2-211ENST00000466451 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
SEC61A2-211ENST00000466451 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
SEC61A2-211ENST00000466451 NNTQ13423 1086 aa9.11□□□□□ -0.95
SEC61A2-211ENST00000466451 TMEM151AQ8N4L1 468 aa9.11□□□□□ -0.95
SEC61A2-211ENST00000466451 GDF11O95390 407 aa9.1□□□□□ -0.95
SEC61A2-211ENST00000466451 TIMP2P16035 220 aa9.09□□□□□ -0.95
SEC61A2-211ENST00000466451 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
SEC61A2-211ENST00000466451 RTN4Q9NQC3 1192 aaKnown RBP9.09□□□□□ -0.95
SEC61A2-211ENST00000466451 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
SEC61A2-211ENST00000466451 ADH1CP00326 375 aa9.08□□□□□ -0.96
SEC61A2-211ENST00000466451 RASSF7Q02833 373 aa9.08□□□□□ -0.96
SEC61A2-211ENST00000466451 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
SEC61A2-211ENST00000466451 CCNYL3P0C7X3 344 aa9.07□□□□□ -0.96
SEC61A2-211ENST00000466451 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
SEC61A2-211ENST00000466451 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
SEC61A2-211ENST00000466451 RNF225M0QZC1 329 aaPredicted RBP9.06□□□□□ -0.96
SEC61A2-211ENST00000466451 UNC93B1Q9H1C4 597 aa9.06□□□□□ -0.96
SEC61A2-211ENST00000466451 MAN1A2O60476 641 aa9.05□□□□□ -0.96
SEC61A2-211ENST00000466451 MS4A1P11836 297 aa9.05□□□□□ -0.96
SEC61A2-211ENST00000466451 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
SEC61A2-211ENST00000466451 VARSP26640 1264 aaKnown RBP9.04□□□□□ -0.96
SEC61A2-211ENST00000466451 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
SEC61A2-211ENST00000466451 BAP1Q92560 729 aa9.04□□□□□ -0.96
SEC61A2-211ENST00000466451 MPNDQ8N594 471 aa9.03□□□□□ -0.96
SEC61A2-211ENST00000466451 PTPRNQ16849 979 aa9.02□□□□□ -0.97
SEC61A2-211ENST00000466451 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
SEC61A2-211ENST00000466451 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
SEC61A2-211ENST00000466451 KLF16Q9BXK1 252 aaPredicted RBP9.01□□□□□ -0.97
SEC61A2-211ENST00000466451 ADAMTS8Q9UP79 889 aa9.01□□□□□ -0.97
SEC61A2-211ENST00000466451 C6orf229H3BNL8 230 aa9□□□□□ -0.97
SEC61A2-211ENST00000466451 EVA1BQ9NVM1 165 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms