RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 EIF2AK4Q9P2K8 1649 aaKnown RBP17.47■□□□□ 0.39
TGFBR3-204ENST00000465892 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
TGFBR3-204ENST00000465892 SSFA2P28290 1259 aa17.46■□□□□ 0.39
TGFBR3-204ENST00000465892 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
TGFBR3-204ENST00000465892 DDIT3P35638 169 aa17.46■□□□□ 0.39
TGFBR3-204ENST00000465892 R3HCC1Q9Y3T6 440 aaKnown RBP17.46■□□□□ 0.39
TGFBR3-204ENST00000465892 NUP160Q12769 1436 aa17.46■□□□□ 0.39
TGFBR3-204ENST00000465892 MSNP26038 577 aaKnown RBP17.45■□□□□ 0.38
TGFBR3-204ENST00000465892 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
TGFBR3-204ENST00000465892 TRIM27P14373 513 aa17.45■□□□□ 0.38
TGFBR3-204ENST00000465892 SYNMO15061 1565 aa17.45■□□□□ 0.38
TGFBR3-204ENST00000465892 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
TGFBR3-204ENST00000465892 DDX49Q9Y6V7 483 aaKnown RBP17.44■□□□□ 0.38
TGFBR3-204ENST00000465892 MTHFSP49914 203 aa17.44■□□□□ 0.38
TGFBR3-204ENST00000465892 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 RIPK4P57078 832 aa17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 ZSCAN30Q86W11 494 aa17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 ANP32BQ92688 251 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-204ENST00000465892 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 AAMPQ13685 434 aa17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 SLC12A5Q9H2X9 1139 aa17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 SMC5Q8IY18 1101 aa17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
TGFBR3-204ENST00000465892 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
TGFBR3-204ENST00000465892 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 NOB1Q9ULX3 412 aaKnown RBP17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
TGFBR3-204ENST00000465892 KIF2CQ99661 725 aa17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 MYOM1P52179 1685 aa17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 ZMYM3Q14202 1370 aa17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 OFD1O75665 1012 aa17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
TGFBR3-204ENST00000465892 SNX21Q969T3 373 aa17.38■□□□□ 0.37
TGFBR3-204ENST00000465892 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
TGFBR3-204ENST00000465892 CAVIN1Q6NZI2 390 aaKnown RBP17.38■□□□□ 0.37
TGFBR3-204ENST00000465892 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
TGFBR3-204ENST00000465892 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TGFBR3-204ENST00000465892 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
TGFBR3-204ENST00000465892 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
TGFBR3-204ENST00000465892 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
TGFBR3-204ENST00000465892 PPP1R9BQ96SB3 815 aa17.37■□□□□ 0.37
TGFBR3-204ENST00000465892 DDX19BQ9UMR2 479 aa17.37■□□□□ 0.37
TGFBR3-204ENST00000465892 ANKRD45Q5TZF3 282 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 ABCA8O94911 1581 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
TGFBR3-204ENST00000465892 IQGAP1P46940 1657 aa17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 BAG4O95429 457 aaKnown RBP17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
TGFBR3-204ENST00000465892 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 TRAK1Q9UPV9 953 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 PKP1Q13835 747 aa17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
TGFBR3-204ENST00000465892 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.37
TGFBR3-204ENST00000465892 UQCRHLA0A096LP55 91 aa17.33■□□□□ 0.37
TGFBR3-204ENST00000465892 UQCRHP07919 91 aa17.33■□□□□ 0.37
TGFBR3-204ENST00000465892 NUCB1Q02818 461 aa17.33■□□□□ 0.37
TGFBR3-204ENST00000465892 UNC13BO14795 1591 aa17.33■□□□□ 0.36
TGFBR3-204ENST00000465892 RBSNQ9H1K0 784 aa17.33■□□□□ 0.36
TGFBR3-204ENST00000465892 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 PRDM4Q9UKN5 801 aa17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 KLHL40Q2TBA0 621 aa17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
TGFBR3-204ENST00000465892 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
TGFBR3-204ENST00000465892 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms