RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 INF2Q27J81 1249 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 LONRF3Q496Y0 759 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 HDGFL1Q5TGJ6 251 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MEX3CQ5U5Q3 659 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 B4GALNT3Q6L9W6 998 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF662Q6ZS27 426 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ANKRD23Q86SG2 305 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 RPAINQ86UA6 219 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MORC1Q86VD1 984 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC30AQ86WT1 665 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC125Q86Z20 511 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ANKRD13AQ8IZ07 590 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6L1Q8N7Z2 621 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ARL10Q8N8L6 244 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SPRYD3Q8NCJ5 442 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MNS1Q8NEH6 495 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CXorf38Q8TB03 319 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MICAL1Q8TDZ2 1067 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MORC4Q8TE76 937 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ARHGEF1Q92888 912 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ITFG2Q969R8 447 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 FAM212AQ96EL1 285 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 FAM210AQ96ND0 272 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SLC26A8Q96RN1 970 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 TSPAN18Q96SJ8 248 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 HIRIP3Q9BW71 556 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 NBPF3Q9H094 633 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 NUCKS1Q9H1E3 243 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 RMI1Q9H9A7 625 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 EFCC1Q9HA90 598 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 UPF2Q9HAU5 1272 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SLC24A3Q9HC58 644 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 GOPCQ9HD26 462 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 BSDC1Q9NW68 430 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 IRAK4Q9NWZ3 460 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 PPP4R2Q9NY27 417 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CALCOCO1Q9P1Z2 691 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ANAPC4Q9UJX5 808 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CIZ1Q9ULV3 898 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SUFUQ9UMX1 484 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SUGT1Q9Y2Z0 365 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 RPS6KL1Q9Y6S9 549 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 DDX49Q9Y6V7 483 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 UNC13AQ9UPW8 1703 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF16BQ96L93 1317 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 DYTNA2CJ06 578 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SPDYE4A6NLX3 237 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 TMCO5BA8MYB1 307 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SMAPO00193 183 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 IPO5O00410 1097 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 DYNC1I1O14576 645 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF3CO14782 793 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CTAGE5O15320 804 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF1CO43896 1103 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RAB11FIP3O75154 756 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CAND2O75155 1236 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 FRAT2O75474 233 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ECM2O94769 699 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ZRANB2O95218 330 aaKnown RBP eCLIP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 IPO7O95373 1038 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ECEL1O95672 775 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NBPF7P0C2Y1 421 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SETSIPP0DME0 302 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NAT2P11245 290 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 MS4A1P11836 297 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NEFHP12036 1026 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ZSCAN20P17040 1043 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 ERCC3P19447 782 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CASQ1P31415 396 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RIPK4P57078 832 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 KCNA1Q09470 495 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CHAF1AQ13111 956 aaPredicted RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 PSMD2Q13200 908 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SETDB1Q15047 1291 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 E2F5Q15329 346 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 PUS10Q3MIT2 529 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC184Q52MB2 194 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 HSP90AB2PQ58FF8 381 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 DNAJC21Q5F1R6 531 aaKnown RBP1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 AP1ARQ63HQ0 302 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC70Q6NSX1 233 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CTR9Q6PD62 1173 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC91Q7Z6B0 441 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 TAX1BP1Q86VP1 789 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SKAP1Q86WV1 359 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 STK11IPQ8N1F8 1099 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 MICALL1Q8N3F8 863 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SDR16C5Q8N3Y7 309 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 NME8Q8N427 588 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 TTC30BQ8N4P2 665 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 PDILTQ8N807 584 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIML1Q8N9V2 468 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 GAS2L2Q8NHY3 880 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 RSPH1Q8WYR4 309 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 TRIM52Q96A61 297 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CLUAP1Q96AJ1 413 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 SIRT1Q96EB6 747 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC34Q96HJ3 373 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 CFAP53Q96M91 514 aa1.1□□□□□ -2.23
RPL39P28-201ENST00000465655 DRC1Q96MC2 740 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms