RNA–Protein interactions for RNA: ENST00000465464.5

ITGB5-204, Transcript of integrin subunit beta 5, humanhuman

TSL 5

Gene ITGB5, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-204ENST00000465464 YTHDC2Q9H6S0 1430 aaKnown RBP18.17■□□□□ 0.5
ITGB5-204ENST00000465464 MYOM2P54296 1465 aa18.16■□□□□ 0.5
ITGB5-204ENST00000465464 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
ITGB5-204ENST00000465464 XPCQ01831 940 aaPredicted RBP18.16■□□□□ 0.5
ITGB5-204ENST00000465464 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
ITGB5-204ENST00000465464 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
ITGB5-204ENST00000465464 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
ITGB5-204ENST00000465464 TECPR2O15040 1411 aa18.14■□□□□ 0.49
ITGB5-204ENST00000465464 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
ITGB5-204ENST00000465464 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
ITGB5-204ENST00000465464 SPATA31A6Q5VVP1 1343 aa18.13■□□□□ 0.49
ITGB5-204ENST00000465464 PNPLA6Q8IY17 1366 aa18.12■□□□□ 0.49
ITGB5-204ENST00000465464 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
ITGB5-204ENST00000465464 ACIN1Q9UKV3 1341 aaKnown RBP18.11■□□□□ 0.49
ITGB5-204ENST00000465464 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
ITGB5-204ENST00000465464 LAMC1P11047 1609 aa18.09■□□□□ 0.49
ITGB5-204ENST00000465464 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
ITGB5-204ENST00000465464 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
ITGB5-204ENST00000465464 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
ITGB5-204ENST00000465464 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
ITGB5-204ENST00000465464 FMN2Q9NZ56 1722 aa18.09■□□□□ 0.49
ITGB5-204ENST00000465464 FOXO3O43524 673 aa18.08■□□□□ 0.48
ITGB5-204ENST00000465464 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
ITGB5-204ENST00000465464 C8orf37Q96NL8 207 aa18.08■□□□□ 0.48
ITGB5-204ENST00000465464 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
ITGB5-204ENST00000465464 HIRIP3Q9BW71 556 aaPredicted RBP18.07■□□□□ 0.48
ITGB5-204ENST00000465464 AFF2P51816 1311 aa18.06■□□□□ 0.48
ITGB5-204ENST00000465464 PXDNQ92626 1479 aa18.06■□□□□ 0.48
ITGB5-204ENST00000465464 SOS2Q07890 1332 aaPredicted RBP18.05■□□□□ 0.48
ITGB5-204ENST00000465464 RGPD8O14715 1765 aaPredicted RBP18.05■□□□□ 0.48
ITGB5-204ENST00000465464 HRCP23327 699 aa18.05■□□□□ 0.48
ITGB5-204ENST00000465464 POGKQ9P215 609 aa18.05■□□□□ 0.48
ITGB5-204ENST00000465464 MINK1Q8N4C8 1332 aaPredicted RBP18.04■□□□□ 0.48
ITGB5-204ENST00000465464 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
ITGB5-204ENST00000465464 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
ITGB5-204ENST00000465464 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
ITGB5-204ENST00000465464 ZNF772Q68DY9 489 aaPredicted RBP17.99■□□□□ 0.47
ITGB5-204ENST00000465464 PMFBP1Q8TBY8 1022 aa17.99■□□□□ 0.47
ITGB5-204ENST00000465464 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
ITGB5-204ENST00000465464 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
ITGB5-204ENST00000465464 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
ITGB5-204ENST00000465464 PHF8Q9UPP1 1060 aa17.97■□□□□ 0.47
ITGB5-204ENST00000465464 COL22A1Q8NFW1 1626 aaPredicted RBP17.97■□□□□ 0.47
ITGB5-204ENST00000465464 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
ITGB5-204ENST00000465464 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
ITGB5-204ENST00000465464 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
ITGB5-204ENST00000465464 KRT28Q7Z3Y7 464 aa17.96■□□□□ 0.47
ITGB5-204ENST00000465464 PRR36Q9H6K5 1346 aa17.96■□□□□ 0.46
ITGB5-204ENST00000465464 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
ITGB5-204ENST00000465464 RXRBP28702 533 aa17.94■□□□□ 0.46
ITGB5-204ENST00000465464 LMOD2Q6P5Q4 547 aa17.94■□□□□ 0.46
ITGB5-204ENST00000465464 CABLES1Q8TDN4 633 aa17.94■□□□□ 0.46
ITGB5-204ENST00000465464 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
ITGB5-204ENST00000465464 QTRT2Q9H974 415 aaKnown RBP17.93■□□□□ 0.46
ITGB5-204ENST00000465464 SPATA31A3Q5VYP0 1347 aa17.92■□□□□ 0.46
ITGB5-204ENST00000465464 USP21Q9UK80 565 aa17.91■□□□□ 0.46
ITGB5-204ENST00000465464 RGS12O14924 1447 aa17.9■□□□□ 0.46
ITGB5-204ENST00000465464 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
ITGB5-204ENST00000465464 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.46
ITGB5-204ENST00000465464 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
ITGB5-204ENST00000465464 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
ITGB5-204ENST00000465464 PSME1Q06323 249 aa17.89■□□□□ 0.45
ITGB5-204ENST00000465464 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
ITGB5-204ENST00000465464 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
ITGB5-204ENST00000465464 HAP1P54257 671 aaPredicted RBP17.86■□□□□ 0.45
ITGB5-204ENST00000465464 ABCA3Q99758 1704 aa17.86■□□□□ 0.45
ITGB5-204ENST00000465464 ATP7BP35670 1465 aa17.85■□□□□ 0.45
ITGB5-204ENST00000465464 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
ITGB5-204ENST00000465464 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
ITGB5-204ENST00000465464 TRPM3Q9HCF6 1732 aaPredicted RBP17.85■□□□□ 0.45
ITGB5-204ENST00000465464 KIAA1210Q9ULL0 1709 aa17.85■□□□□ 0.45
ITGB5-204ENST00000465464 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
ITGB5-204ENST00000465464 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
ITGB5-204ENST00000465464 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
ITGB5-204ENST00000465464 CDK19Q9BWU1 502 aa17.84■□□□□ 0.45
ITGB5-204ENST00000465464 ATRNO75882 1429 aa17.83■□□□□ 0.45
ITGB5-204ENST00000465464 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.44
ITGB5-204ENST00000465464 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
ITGB5-204ENST00000465464 UPF1Q92900 1129 aaKnown RBP eCLIP17.82■□□□□ 0.44
ITGB5-204ENST00000465464 SBNO1A3KN83 1393 aa17.81■□□□□ 0.44
ITGB5-204ENST00000465464 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
ITGB5-204ENST00000465464 TRPC5Q9UL62 973 aaPredicted RBP17.81■□□□□ 0.44
ITGB5-204ENST00000465464 CDK12Q9NYV4 1490 aaPredicted RBP17.81■□□□□ 0.44
ITGB5-204ENST00000465464 QRICH2Q9H0J4 1663 aa17.8■□□□□ 0.44
ITGB5-204ENST00000465464 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
ITGB5-204ENST00000465464 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
ITGB5-204ENST00000465464 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
ITGB5-204ENST00000465464 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
ITGB5-204ENST00000465464 CABP2Q9NPB3 220 aa17.79■□□□□ 0.44
ITGB5-204ENST00000465464 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
ITGB5-204ENST00000465464 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
ITGB5-204ENST00000465464 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
ITGB5-204ENST00000465464 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
ITGB5-204ENST00000465464 NBPF8Q3BBV2 869 aa17.78■□□□□ 0.44
ITGB5-204ENST00000465464 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
ITGB5-204ENST00000465464 SLIT2O94813 1529 aa17.77■□□□□ 0.44
ITGB5-204ENST00000465464 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.44
ITGB5-204ENST00000465464 GLI3P10071 1580 aa17.77■□□□□ 0.44
ITGB5-204ENST00000465464 RALGAPBQ86X10 1494 aa17.75■□□□□ 0.43
ITGB5-204ENST00000465464 ACEP12821 1306 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms