RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 C8orf37Q96NL8 207 aa22.78■■□□□ 1.24
HOXB3-204ENST00000465120 AFF2P51816 1311 aa22.78■■□□□ 1.24
HOXB3-204ENST00000465120 LRPPRCP42704 1394 aaKnown RBP22.77■■□□□ 1.24
HOXB3-204ENST00000465120 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
HOXB3-204ENST00000465120 RXRBP28702 533 aa22.76■■□□□ 1.23
HOXB3-204ENST00000465120 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
HOXB3-204ENST00000465120 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
HOXB3-204ENST00000465120 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
HOXB3-204ENST00000465120 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
HOXB3-204ENST00000465120 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
HOXB3-204ENST00000465120 YTHDC2Q9H6S0 1430 aaKnown RBP22.73■■□□□ 1.23
HOXB3-204ENST00000465120 C14orf93Q9H972 538 aaKnown RBP22.72■■□□□ 1.23
HOXB3-204ENST00000465120 NPHP3Q7Z494 1330 aa22.72■■□□□ 1.23
HOXB3-204ENST00000465120 PLEKHH1Q9ULM0 1364 aa22.72■■□□□ 1.23
HOXB3-204ENST00000465120 TECPR2O15040 1411 aa22.72■■□□□ 1.23
HOXB3-204ENST00000465120 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
HOXB3-204ENST00000465120 FOXO3O43524 673 aa22.71■■□□□ 1.23
HOXB3-204ENST00000465120 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
HOXB3-204ENST00000465120 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
HOXB3-204ENST00000465120 QTRT2Q9H974 415 aaKnown RBP22.69■■□□□ 1.22
HOXB3-204ENST00000465120 LAMC1P11047 1609 aa22.68■■□□□ 1.22
HOXB3-204ENST00000465120 KNDC1Q76NI1 1749 aa22.68■■□□□ 1.22
HOXB3-204ENST00000465120 SAFB2Q14151 953 aaKnown RBP eCLIP22.67■■□□□ 1.22
HOXB3-204ENST00000465120 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
HOXB3-204ENST00000465120 MYOM2P54296 1465 aa22.66■■□□□ 1.22
HOXB3-204ENST00000465120 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
HOXB3-204ENST00000465120 POGKQ9P215 609 aa22.65■■□□□ 1.22
HOXB3-204ENST00000465120 DCAF11Q8TEB1 546 aa22.64■■□□□ 1.21
HOXB3-204ENST00000465120 PRAM1Q96QH2 718 aa22.64■■□□□ 1.21
HOXB3-204ENST00000465120 NRXN1Q9ULB1 1477 aa22.63■■□□□ 1.21
HOXB3-204ENST00000465120 RBM6P78332 1123 aaKnown RBP22.63■■□□□ 1.21
HOXB3-204ENST00000465120 USP21Q9UK80 565 aa22.62■■□□□ 1.21
HOXB3-204ENST00000465120 PXDNQ92626 1479 aa22.6■■□□□ 1.21
HOXB3-204ENST00000465120 FMN2Q9NZ56 1722 aa22.6■■□□□ 1.21
HOXB3-204ENST00000465120 HRCP23327 699 aa22.6■■□□□ 1.21
HOXB3-204ENST00000465120 KRT28Q7Z3Y7 464 aa22.59■■□□□ 1.21
HOXB3-204ENST00000465120 UPF1Q92900 1129 aaKnown RBP eCLIP22.59■■□□□ 1.212e-6■■■□□ 17.8
HOXB3-204ENST00000465120 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
HOXB3-204ENST00000465120 CDK12Q9NYV4 1490 aaPredicted RBP22.59■■□□□ 1.21
HOXB3-204ENST00000465120 TRPC5Q9UL62 973 aaPredicted RBP22.57■■□□□ 1.2
HOXB3-204ENST00000465120 PHF8Q9UPP1 1060 aa22.57■■□□□ 1.2
HOXB3-204ENST00000465120 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
HOXB3-204ENST00000465120 PLEKHG5O94827 1062 aa22.55■■□□□ 1.2
HOXB3-204ENST00000465120 PSME1Q06323 249 aa22.55■■□□□ 1.2
HOXB3-204ENST00000465120 FNBP4Q8N3X1 1017 aaPredicted RBP22.55■■□□□ 1.2
HOXB3-204ENST00000465120 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
HOXB3-204ENST00000465120 HAP1P54257 671 aaPredicted RBP22.54■■□□□ 1.2
HOXB3-204ENST00000465120 LMOD2Q6P5Q4 547 aa22.54■■□□□ 1.2
HOXB3-204ENST00000465120 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
HOXB3-204ENST00000465120 SPATA31A3Q5VYP0 1347 aa22.54■■□□□ 1.2
HOXB3-204ENST00000465120 RGPD8O14715 1765 aaPredicted RBP22.53■■□□□ 1.2
HOXB3-204ENST00000465120 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
HOXB3-204ENST00000465120 RGS12O14924 1447 aa22.53■■□□□ 1.2
HOXB3-204ENST00000465120 PMFBP1Q8TBY8 1022 aa22.52■■□□□ 1.2
HOXB3-204ENST00000465120 MINK1Q8N4C8 1332 aaPredicted RBP22.52■■□□□ 1.2
HOXB3-204ENST00000465120 DLC1Q96QB1 1528 aa22.52■■□□□ 1.19
HOXB3-204ENST00000465120 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
HOXB3-204ENST00000465120 MARF1Q9Y4F3 1742 aaKnown RBP22.46■■□□□ 1.19
HOXB3-204ENST00000465120 CABLES1Q8TDN4 633 aa22.46■■□□□ 1.19
HOXB3-204ENST00000465120 ATRNO75882 1429 aa22.46■■□□□ 1.19
HOXB3-204ENST00000465120 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
HOXB3-204ENST00000465120 ANKARQ7Z5J8 1434 aa22.45■■□□□ 1.18
HOXB3-204ENST00000465120 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
HOXB3-204ENST00000465120 EIF3AQ14152 1382 aaKnown RBP22.43■■□□□ 1.18
HOXB3-204ENST00000465120 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
HOXB3-204ENST00000465120 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
HOXB3-204ENST00000465120 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
HOXB3-204ENST00000465120 GJD4Q96KN9 370 aaPredicted RBP22.42■■□□□ 1.18
HOXB3-204ENST00000465120 ADGRB2O60241 1585 aa22.42■■□□□ 1.18
HOXB3-204ENST00000465120 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
HOXB3-204ENST00000465120 GPRASP1Q5JY77 1395 aa22.41■■□□□ 1.18
HOXB3-204ENST00000465120 ATAD2Q6PL18 1390 aa22.41■■□□□ 1.18
HOXB3-204ENST00000465120 USP32Q8NFA0 1604 aa22.41■■□□□ 1.18
HOXB3-204ENST00000465120 NGDNQ8NEJ9 315 aaKnown RBP22.4■■□□□ 1.18
HOXB3-204ENST00000465120 PRR36Q9H6K5 1346 aa22.38■■□□□ 1.17
HOXB3-204ENST00000465120 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
HOXB3-204ENST00000465120 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
HOXB3-204ENST00000465120 TULP4Q9NRJ4 1543 aa22.36■■□□□ 1.17
HOXB3-204ENST00000465120 SLIT2O94813 1529 aa22.36■■□□□ 1.17
HOXB3-204ENST00000465120 NUDT16Q96DE0 195 aaKnown RBP22.34■■□□□ 1.17
HOXB3-204ENST00000465120 ARHGEF28Q8N1W1 1705 aaKnown RBP22.34■■□□□ 1.17
HOXB3-204ENST00000465120 CDK19Q9BWU1 502 aa22.33■■□□□ 1.17
HOXB3-204ENST00000465120 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.17
HOXB3-204ENST00000465120 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
HOXB3-204ENST00000465120 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
HOXB3-204ENST00000465120 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
HOXB3-204ENST00000465120 VPS72Q15906 364 aa22.3■■□□□ 1.16
HOXB3-204ENST00000465120 ABCA3Q99758 1704 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 TRPM3Q9HCF6 1732 aaPredicted RBP22.28■■□□□ 1.16
HOXB3-204ENST00000465120 PLCH1Q4KWH8 1693 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 A0A0G2JS52 829 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 MYT1Q01538 1121 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 GLI3P10071 1580 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 KIAA1210Q9ULL0 1709 aa22.28■■□□□ 1.16
HOXB3-204ENST00000465120 ITSN1Q15811 1721 aa22.27■■□□□ 1.16
HOXB3-204ENST00000465120 SEPT12Q8IYM1 358 aa22.27■■□□□ 1.16
HOXB3-204ENST00000465120 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
HOXB3-204ENST00000465120 ATP7BP35670 1465 aa22.26■■□□□ 1.15
HOXB3-204ENST00000465120 NWD2Q9ULI1 1742 aa22.26■■□□□ 1.15
HOXB3-204ENST00000465120 SRPK2P78362 688 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms