RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 SEC24BO95487 1268 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 RGL3Q3MIN7 710 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 UTP14CQ5TAP6 766 aaKnown RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 TMEM131LA2VDJ0 1609 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 POLR1AO95602 1720 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 MAGI2Q86UL8 1455 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 ABCC5O15440 1437 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 ARHGEF12Q9NZN5 1544 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 KIF20AO95235 890 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 KLHL40Q2TBA0 621 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 TNPO1Q92973 898 aaKnown RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 SYAP1Q96A49 352 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 DENND4BO75064 1496 aaPredicted RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 SMC5Q8IY18 1101 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 PANK1Q8TE04 598 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 ZC3H13Q5T200 1668 aaKnown RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 ANKRD50Q9ULJ7 1429 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 CFAP53Q96M91 514 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 KIAA0586Q9BVV6 1533 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 IPO8O15397 1037 aaKnown RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 PLEKHG5O94827 1062 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 ZKSCAN2Q63HK3 967 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 STAC3Q96MF2 364 aa4.8□□□□□ -1.64
CCNL1-204ENST00000464316 CCDC94Q9BW85 323 aaPredicted RBP4.8□□□□□ -1.64
CCNL1-204ENST00000464316 IBTKQ9P2D0 1353 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 PHF14O94880 888 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 LETM1O95202 739 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 PDE4CQ08493 712 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 CCDC146Q8IYE0 955 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 TRMT2AQ8IZ69 625 aaKnown RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 DDX19BQ9UMR2 479 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 SCAPERQ9BY12 1400 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 LAMC1P11047 1609 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 CT47B1P0C2W7 299 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 PRIMPOLQ96LW4 560 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 ARHGEF5Q12774 1597 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 ZNF521Q96K83 1311 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 KIF16BQ96L93 1317 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 MBD5Q9P267 1494 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 K7ELQ4 463 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 RBM25P49756 843 aaKnown RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 FGD1P98174 961 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 CWC22Q9HCG8 908 aaKnown RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 ADAMTSL3P82987 1691 aa4.79□□□□□ -1.64
CCNL1-204ENST00000464316 EPRSP07814 1512 aaKnown RBP4.79□□□□□ -1.64
CCNL1-204ENST00000464316 RSPH4AQ5TD94 716 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 CASC1Q6TDU7 716 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 DZIP1LQ8IYY4 767 aaKnown RBP4.78□□□□□ -1.64
CCNL1-204ENST00000464316 DIAPH3Q9NSV4 1193 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 USP54Q70EL1 1684 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 PLEKHH1Q9ULM0 1364 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 ERBINQ96RT1 1412 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 MBD3O95983 291 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 WDR63Q8IWG1 891 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 ERBB4Q15303 1308 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 IQGAP3Q86VI3 1631 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 MYO5CQ9NQX4 1742 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 PLEKHD1A6NEE1 506 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 ZNF445P59923 1031 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 PRDM4Q9UKN5 801 aa4.78□□□□□ -1.64
CCNL1-204ENST00000464316 ZNF644Q9H582 1327 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-204ENST00000464316 PZPP20742 1482 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 GAPVD1Q14C86 1478 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 RARSP54136 660 aaKnown RBP4.77□□□□□ -1.65
CCNL1-204ENST00000464316 RIPK4P57078 832 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 DMTNQ08495 405 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 MVPQ14764 893 aaKnown RBP4.77□□□□□ -1.65
CCNL1-204ENST00000464316 NEUROD2Q15784 382 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 CAVIN1Q6NZI2 390 aaKnown RBP4.77□□□□□ -1.65
CCNL1-204ENST00000464316 RUNDC1Q96C34 613 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 ARID3AQ99856 593 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 ST18O60284 1047 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 TPM3P06753 285 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 XPCQ01831 940 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-204ENST00000464316 GAS2L3Q86XJ1 694 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 KIF3AQ9Y496 699 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 ABCC10Q5T3U5 1492 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 KDM5DQ9BY66 1539 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 UNC13BO14795 1591 aa4.77□□□□□ -1.65
CCNL1-204ENST00000464316 CCDC66A2RUB6 948 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 HDAC1Q13547 482 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 RABEP1Q15276 862 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 MCTP1Q6DN14 999 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 ITPRIPQ8IWB1 547 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 PDCL2Q8N4E4 241 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 FAM184AQ8NB25 1140 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 ZHX1Q9UKY1 873 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 PIK3C2GO75747 1445 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 RAD54L2Q9Y4B4 1467 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 MAGI3Q5TCQ9 1506 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 BAG4O95429 457 aaKnown RBP4.76□□□□□ -1.65
CCNL1-204ENST00000464316 NBPF1Q3BBV0 1214 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 GPRASP1Q5JY77 1395 aa4.76□□□□□ -1.65
CCNL1-204ENST00000464316 WWC1Q8IX03 1113 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms