RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 ZRANB1Q9UGI0 708 aa20.14■□□□□ 0.81
MRPL55-224ENST00000464148 RPGRIP1LQ68CZ1 1315 aa20.12■□□□□ 0.81
MRPL55-224ENST00000464148 NPHP3Q7Z494 1330 aa20.12■□□□□ 0.81
MRPL55-224ENST00000464148 EP400Q96L91 3159 aa20.12■□□□□ 0.81
MRPL55-224ENST00000464148 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
MRPL55-224ENST00000464148 NAIPQ13075 1403 aa20.1■□□□□ 0.81
MRPL55-224ENST00000464148 XPCQ01831 940 aaPredicted RBP20.09■□□□□ 0.81
MRPL55-224ENST00000464148 MYOM2P54296 1465 aa20.09■□□□□ 0.81
MRPL55-224ENST00000464148 FOXO3O43524 673 aa20.08■□□□□ 0.81
MRPL55-224ENST00000464148 CCDC125Q86Z20 511 aa20.08■□□□□ 0.81
MRPL55-224ENST00000464148 PPLO60437 1756 aa20.08■□□□□ 0.8
MRPL55-224ENST00000464148 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.8
MRPL55-224ENST00000464148 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
MRPL55-224ENST00000464148 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
MRPL55-224ENST00000464148 PXDNQ92626 1479 aa20.06■□□□□ 0.8
MRPL55-224ENST00000464148 GJD4Q96KN9 370 aaPredicted RBP20.06■□□□□ 0.8
MRPL55-224ENST00000464148 SLC4A1APQ9BWU0 796 aaKnown RBP20.06■□□□□ 0.8
MRPL55-224ENST00000464148 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
MRPL55-224ENST00000464148 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
MRPL55-224ENST00000464148 STK26Q9P289 416 aa20.04■□□□□ 0.8
MRPL55-224ENST00000464148 WAPLQ7Z5K2 1190 aa20.01■□□□□ 0.79
MRPL55-224ENST00000464148 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
MRPL55-224ENST00000464148 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
MRPL55-224ENST00000464148 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
MRPL55-224ENST00000464148 ADGRF5Q8IZF2 1346 aa19.99■□□□□ 0.79
MRPL55-224ENST00000464148 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
MRPL55-224ENST00000464148 RALGAPBQ86X10 1494 aa19.97■□□□□ 0.79
MRPL55-224ENST00000464148 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-224ENST00000464148 HAP1P54257 671 aaPredicted RBP19.96■□□□□ 0.79
MRPL55-224ENST00000464148 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
MRPL55-224ENST00000464148 GLI3P10071 1580 aa19.95■□□□□ 0.78
MRPL55-224ENST00000464148 TECPR2O15040 1411 aa19.95■□□□□ 0.78
MRPL55-224ENST00000464148 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
MRPL55-224ENST00000464148 SLIT2O94813 1529 aa19.95■□□□□ 0.78
MRPL55-224ENST00000464148 CCDC144AA2RUR9 1427 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 FMN2Q9NZ56 1722 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 SF3B2Q13435 895 aaKnown RBP19.94■□□□□ 0.78
MRPL55-224ENST00000464148 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 ABCC11Q96J66 1382 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 PLEKHH1Q9ULM0 1364 aa19.94■□□□□ 0.78
MRPL55-224ENST00000464148 USP32Q8NFA0 1604 aa19.93■□□□□ 0.78
MRPL55-224ENST00000464148 ANKRD30BQ9BXX2 1392 aa19.93■□□□□ 0.78
MRPL55-224ENST00000464148 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
MRPL55-224ENST00000464148 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
MRPL55-224ENST00000464148 BRWD3Q6RI45 1802 aa19.91■□□□□ 0.78
MRPL55-224ENST00000464148 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
MRPL55-224ENST00000464148 CCDC9Q9Y3X0 531 aaKnown RBP19.91■□□□□ 0.78
MRPL55-224ENST00000464148 PSME1Q06323 249 aa19.9■□□□□ 0.78
MRPL55-224ENST00000464148 SEPT12Q8IYM1 358 aa19.9■□□□□ 0.78
MRPL55-224ENST00000464148 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
MRPL55-224ENST00000464148 SPATA31E1Q6ZUB1 1445 aa19.89■□□□□ 0.77
MRPL55-224ENST00000464148 CABLES1Q8TDN4 633 aa19.89■□□□□ 0.77
MRPL55-224ENST00000464148 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
MRPL55-224ENST00000464148 VPS72Q15906 364 aa19.88■□□□□ 0.77
MRPL55-224ENST00000464148 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
MRPL55-224ENST00000464148 PHF8Q9UPP1 1060 aa19.88■□□□□ 0.77
MRPL55-224ENST00000464148 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
MRPL55-224ENST00000464148 TNS3Q68CZ2 1445 aa19.87■□□□□ 0.77
MRPL55-224ENST00000464148 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
MRPL55-224ENST00000464148 PLCH1Q4KWH8 1693 aa19.86■□□□□ 0.77
MRPL55-224ENST00000464148 KRT27Q7Z3Y8 459 aa19.85■□□□□ 0.77
MRPL55-224ENST00000464148 A0A0G2JS52 829 aa19.84■□□□□ 0.77
MRPL55-224ENST00000464148 MYT1Q01538 1121 aa19.84■□□□□ 0.77
MRPL55-224ENST00000464148 SIRT1Q96EB6 747 aa19.84■□□□□ 0.77
MRPL55-224ENST00000464148 NWD2Q9ULI1 1742 aa19.84■□□□□ 0.77
MRPL55-224ENST00000464148 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.77
MRPL55-224ENST00000464148 ONECUT3O60422 494 aaPredicted RBP19.82■□□□□ 0.76
MRPL55-224ENST00000464148 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
MRPL55-224ENST00000464148 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
MRPL55-224ENST00000464148 ARHGEF10O15013 1369 aa19.82■□□□□ 0.76
MRPL55-224ENST00000464148 ABCA3Q99758 1704 aa19.81■□□□□ 0.76
MRPL55-224ENST00000464148 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
MRPL55-224ENST00000464148 NRXN1Q9ULB1 1477 aa19.8■□□□□ 0.76
MRPL55-224ENST00000464148 BAG6P46379 1132 aa19.8■□□□□ 0.76
MRPL55-224ENST00000464148 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
MRPL55-224ENST00000464148 FAM83GA6ND36 823 aa19.79■□□□□ 0.76
MRPL55-224ENST00000464148 PRAM1Q96QH2 718 aa19.79■□□□□ 0.76
MRPL55-224ENST00000464148 LRP5O75197 1615 aa19.79■□□□□ 0.76
MRPL55-224ENST00000464148 PSDA5PKW4 1024 aaPredicted RBP19.78■□□□□ 0.76
MRPL55-224ENST00000464148 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
MRPL55-224ENST00000464148 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
MRPL55-224ENST00000464148 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
MRPL55-224ENST00000464148 POGKQ9P215 609 aa19.77■□□□□ 0.76
MRPL55-224ENST00000464148 BTG4Q9NY30 223 aa19.75■□□□□ 0.75
MRPL55-224ENST00000464148 ANKARQ7Z5J8 1434 aa19.74■□□□□ 0.75
MRPL55-224ENST00000464148 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
MRPL55-224ENST00000464148 HRCP23327 699 aa19.72■□□□□ 0.75
MRPL55-224ENST00000464148 GPRASP1Q5JY77 1395 aa19.71■□□□□ 0.75
MRPL55-224ENST00000464148 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
MRPL55-224ENST00000464148 EN1Q05925 392 aaPredicted RBP19.7■□□□□ 0.74
MRPL55-224ENST00000464148 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
MRPL55-224ENST00000464148 RGPD1P0DJD0 1748 aa19.7■□□□□ 0.74
MRPL55-224ENST00000464148 TRPM3Q9HCF6 1732 aaPredicted RBP19.7■□□□□ 0.74
MRPL55-224ENST00000464148 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
MRPL55-224ENST00000464148 FAM182BQ5T319 152 aa19.69■□□□□ 0.74
MRPL55-224ENST00000464148 ADGRB2O60241 1585 aa19.68■□□□□ 0.74
MRPL55-224ENST00000464148 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
MRPL55-224ENST00000464148 ALS2Q96Q42 1657 aa19.67■□□□□ 0.74
MRPL55-224ENST00000464148 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms