RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-224	ENST00000464148	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.06	□□□□□ -0.32	8e-13	■■■□□ 15.5
MRPL55-224	ENST00000464148	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.25	□□□□□ -0.45	1e-12	■■■■■ 43.4
MRPL55-224	ENST00000464148	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.22	□□□□□ -0.45	1e-12	■■■■■ 60.4
MRPL55-224	ENST00000464148	RBM5	P52756	815 aa	Known RBP eCLIP	16.99	■□□□□ 0.31	1e-8	■■■■■ 47.1
MRPL55-224	ENST00000464148	U2AF2	P26368	475 aa	Known RBP eCLIP	14.39	□□□□□ -0.11	2e-8	■□□□□ 10
MRPL55-224	ENST00000464148	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	16.02	■□□□□ 0.16	1e-7	■■■■□ 24.9
MRPL55-224	ENST00000464148	DDX3X	O00571	662 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	2e-7	■■■■□ 21.3
MRPL55-224	ENST00000464148	SF3B1	O75533	1304 aa	Known RBP eCLIP	14.79	□□□□□ -0.04	2e-7	■■■■■ 129.2
MRPL55-224	ENST00000464148	AQR	O60306	1485 aa	Known RBP eCLIP	24.81	■■□□□ 1.56	3e-7	■■■■■ 28.3
MRPL55-224	ENST00000464148	PABPC4	Q13310	644 aa	Known RBP eCLIP	16.5	■□□□□ 0.23	6e-7	■■■■□ 25
MRPL55-224	ENST00000464148	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	7e-7	■■■□□ 18.1
MRPL55-224	ENST00000464148	PPIG	Q13427	754 aa	Known RBP eCLIP	16	■□□□□ 0.15	1e-6	■■■■□ 24.6
MRPL55-224	ENST00000464148	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	14.07	□□□□□ -0.16	2e-6	■■■■■ 165.1
MRPL55-224	ENST00000464148	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	2e-6	■■■■□ 23.5
MRPL55-224	ENST00000464148	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	16.85	■□□□□ 0.29	3e-6	■■■■□ 21.3

Retrieved 15 of 15 RNA–protein pairs in 17.9 ms