RNA–Protein interactions for RNA: ENST00000464011.1

TFRC-208, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-208ENST00000464011 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.29
TFRC-208ENST00000464011 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
TFRC-208ENST00000464011 RALGAPBQ86X10 1494 aa16.84■□□□□ 0.29
TFRC-208ENST00000464011 NRXN3Q9Y4C0 1643 aa16.82■□□□□ 0.28
TFRC-208ENST00000464011 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
TFRC-208ENST00000464011 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
TFRC-208ENST00000464011 SLIT2O94813 1529 aa16.77■□□□□ 0.28
TFRC-208ENST00000464011 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
TFRC-208ENST00000464011 BAG6P46379 1132 aa16.76■□□□□ 0.27
TFRC-208ENST00000464011 ABCC5O15440 1437 aa16.76■□□□□ 0.27
TFRC-208ENST00000464011 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
TFRC-208ENST00000464011 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
TFRC-208ENST00000464011 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
TFRC-208ENST00000464011 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
TFRC-208ENST00000464011 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.27
TFRC-208ENST00000464011 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
TFRC-208ENST00000464011 PXDNQ92626 1479 aa16.71■□□□□ 0.27
TFRC-208ENST00000464011 DAPK1P53355 1430 aa16.7■□□□□ 0.26
TFRC-208ENST00000464011 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
TFRC-208ENST00000464011 TNS1Q9HBL0 1735 aaKnown RBP16.69■□□□□ 0.26
TFRC-208ENST00000464011 USP32Q8NFA0 1604 aa16.69■□□□□ 0.26
TFRC-208ENST00000464011 METP08581 1390 aa16.68■□□□□ 0.26
TFRC-208ENST00000464011 KRT27Q7Z3Y8 459 aa16.68■□□□□ 0.26
TFRC-208ENST00000464011 ORAI2Q96SN7 254 aa16.68■□□□□ 0.26
TFRC-208ENST00000464011 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
TFRC-208ENST00000464011 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
TFRC-208ENST00000464011 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
TFRC-208ENST00000464011 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
TFRC-208ENST00000464011 ADGRL2O95490 1459 aa16.66■□□□□ 0.26
TFRC-208ENST00000464011 E9PCH4 1651 aa16.65■□□□□ 0.26
TFRC-208ENST00000464011 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
TFRC-208ENST00000464011 EN1Q05925 392 aaPredicted RBP16.64■□□□□ 0.25
TFRC-208ENST00000464011 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
TFRC-208ENST00000464011 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
TFRC-208ENST00000464011 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.25
TFRC-208ENST00000464011 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
TFRC-208ENST00000464011 VPS72Q15906 364 aa16.62■□□□□ 0.25
TFRC-208ENST00000464011 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
TFRC-208ENST00000464011 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
TFRC-208ENST00000464011 ZNF784Q8NCA9 323 aaPredicted RBP16.61■□□□□ 0.25
TFRC-208ENST00000464011 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
TFRC-208ENST00000464011 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
TFRC-208ENST00000464011 RREB1Q92766 1687 aa16.59■□□□□ 0.25
TFRC-208ENST00000464011 C1QTNF8P60827 252 aa16.57■□□□□ 0.24
TFRC-208ENST00000464011 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
TFRC-208ENST00000464011 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
TFRC-208ENST00000464011 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
TFRC-208ENST00000464011 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
TFRC-208ENST00000464011 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
TFRC-208ENST00000464011 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
TFRC-208ENST00000464011 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
TFRC-208ENST00000464011 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
TFRC-208ENST00000464011 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
TFRC-208ENST00000464011 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
TFRC-208ENST00000464011 CHD4Q14839 1912 aa16.53■□□□□ 0.24
TFRC-208ENST00000464011 NEXMIFQ5QGS0 1516 aa16.52■□□□□ 0.24
TFRC-208ENST00000464011 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.24
TFRC-208ENST00000464011 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
TFRC-208ENST00000464011 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
TFRC-208ENST00000464011 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
TFRC-208ENST00000464011 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
TFRC-208ENST00000464011 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
TFRC-208ENST00000464011 UTRNP46939 3433 aa16.51■□□□□ 0.23
TFRC-208ENST00000464011 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
TFRC-208ENST00000464011 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
TFRC-208ENST00000464011 FOXO3O43524 673 aa16.5■□□□□ 0.23
TFRC-208ENST00000464011 ESCO1Q5FWF5 840 aa16.5■□□□□ 0.23
TFRC-208ENST00000464011 KANK4Q5T7N3 995 aaPredicted RBP16.5■□□□□ 0.23
TFRC-208ENST00000464011 A0A0G2JS52 829 aa16.49■□□□□ 0.23
TFRC-208ENST00000464011 MYT1Q01538 1121 aa16.49■□□□□ 0.23
TFRC-208ENST00000464011 SPON1Q9HCB6 807 aa16.49■□□□□ 0.23
TFRC-208ENST00000464011 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
TFRC-208ENST00000464011 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
TFRC-208ENST00000464011 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
TFRC-208ENST00000464011 KCNQ2O43526 872 aa16.45■□□□□ 0.22
TFRC-208ENST00000464011 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
TFRC-208ENST00000464011 NRKQ7Z2Y5 1582 aa16.44■□□□□ 0.22
TFRC-208ENST00000464011 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
TFRC-208ENST00000464011 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
TFRC-208ENST00000464011 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
TFRC-208ENST00000464011 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
TFRC-208ENST00000464011 FMN2Q9NZ56 1722 aa16.41■□□□□ 0.22
TFRC-208ENST00000464011 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
TFRC-208ENST00000464011 MYOM1P52179 1685 aa16.4■□□□□ 0.22
TFRC-208ENST00000464011 NAIPQ13075 1403 aa16.4■□□□□ 0.22
TFRC-208ENST00000464011 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
TFRC-208ENST00000464011 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
TFRC-208ENST00000464011 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
TFRC-208ENST00000464011 TRIM37O94972 964 aa16.38■□□□□ 0.21
TFRC-208ENST00000464011 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
TFRC-208ENST00000464011 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
TFRC-208ENST00000464011 APBA3O96018 575 aa16.37■□□□□ 0.21
TFRC-208ENST00000464011 CABLES1Q8TDN4 633 aa16.37■□□□□ 0.21
TFRC-208ENST00000464011 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
TFRC-208ENST00000464011 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
TFRC-208ENST00000464011 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
TFRC-208ENST00000464011 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
TFRC-208ENST00000464011 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
TFRC-208ENST00000464011 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
TFRC-208ENST00000464011 KIF1BO60333 1816 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms