RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
MDH1-209ENST00000462944 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
MDH1-209ENST00000462944 METP08581 1390 aa13.93□□□□□ -0.18
MDH1-209ENST00000462944 ZNF326Q5BKZ1 582 aaKnown RBP13.92□□□□□ -0.18
MDH1-209ENST00000462944 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
MDH1-209ENST00000462944 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
MDH1-209ENST00000462944 USP21Q9UK80 565 aa13.91□□□□□ -0.18
MDH1-209ENST00000462944 ATRNO75882 1429 aa13.9□□□□□ -0.18
MDH1-209ENST00000462944 HFM1A2PYH4 1435 aa13.9□□□□□ -0.19
MDH1-209ENST00000462944 PPLO60437 1756 aa13.89□□□□□ -0.19
MDH1-209ENST00000462944 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
MDH1-209ENST00000462944 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
MDH1-209ENST00000462944 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
MDH1-209ENST00000462944 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
MDH1-209ENST00000462944 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
MDH1-209ENST00000462944 MYOM2P54296 1465 aa13.86□□□□□ -0.19
MDH1-209ENST00000462944 BRWD3Q6RI45 1802 aa13.85□□□□□ -0.19
MDH1-209ENST00000462944 LRPPRCP42704 1394 aaKnown RBP13.85□□□□□ -0.19
MDH1-209ENST00000462944 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
MDH1-209ENST00000462944 DDX17Q92841 729 aaKnown RBP13.85□□□□□ -0.19
MDH1-209ENST00000462944 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
MDH1-209ENST00000462944 LRP5O75197 1615 aa13.84□□□□□ -0.19
MDH1-209ENST00000462944 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
MDH1-209ENST00000462944 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.2
MDH1-209ENST00000462944 KNDC1Q76NI1 1749 aa13.83□□□□□ -0.2
MDH1-209ENST00000462944 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
MDH1-209ENST00000462944 PXDNQ92626 1479 aa13.82□□□□□ -0.2
MDH1-209ENST00000462944 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
MDH1-209ENST00000462944 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
MDH1-209ENST00000462944 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
MDH1-209ENST00000462944 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
MDH1-209ENST00000462944 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
MDH1-209ENST00000462944 FMN2Q9NZ56 1722 aa13.79□□□□□ -0.2
MDH1-209ENST00000462944 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
MDH1-209ENST00000462944 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
MDH1-209ENST00000462944 SLIT2O94813 1529 aa13.78□□□□□ -0.2
MDH1-209ENST00000462944 GLI3P10071 1580 aa13.78□□□□□ -0.2
MDH1-209ENST00000462944 EP400Q96L91 3159 aa13.78□□□□□ -0.2
MDH1-209ENST00000462944 TECPR2O15040 1411 aa13.77□□□□□ -0.21
MDH1-209ENST00000462944 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
MDH1-209ENST00000462944 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
MDH1-209ENST00000462944 IFT172Q9UG01 1749 aa13.77□□□□□ -0.21
MDH1-209ENST00000462944 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
MDH1-209ENST00000462944 CCDC144AA2RUR9 1427 aa13.76□□□□□ -0.21
MDH1-209ENST00000462944 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
MDH1-209ENST00000462944 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
MDH1-209ENST00000462944 RALGAPBQ86X10 1494 aa13.75□□□□□ -0.21
MDH1-209ENST00000462944 ABCA3Q99758 1704 aa13.74□□□□□ -0.21
MDH1-209ENST00000462944 NAIPQ13075 1403 aa13.73□□□□□ -0.21
MDH1-209ENST00000462944 ITGAEP38570 1179 aa13.73□□□□□ -0.21
MDH1-209ENST00000462944 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
MDH1-209ENST00000462944 FOXO3O43524 673 aa13.72□□□□□ -0.21
MDH1-209ENST00000462944 SPATA31A3Q5VYP0 1347 aa13.71□□□□□ -0.21
MDH1-209ENST00000462944 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
MDH1-209ENST00000462944 ABCC11Q96J66 1382 aa13.71□□□□□ -0.22
MDH1-209ENST00000462944 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
MDH1-209ENST00000462944 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
MDH1-209ENST00000462944 PSME1Q06323 249 aa13.69□□□□□ -0.22
MDH1-209ENST00000462944 VPS72Q15906 364 aa13.69□□□□□ -0.22
MDH1-209ENST00000462944 TNS3Q68CZ2 1445 aa13.68□□□□□ -0.22
MDH1-209ENST00000462944 SIRT1Q96EB6 747 aa13.68□□□□□ -0.22
MDH1-209ENST00000462944 SRCAPQ6ZRS2 3230 aa13.68□□□□□ -0.22
MDH1-209ENST00000462944 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
MDH1-209ENST00000462944 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
MDH1-209ENST00000462944 BAG6P46379 1132 aa13.67□□□□□ -0.22
MDH1-209ENST00000462944 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
MDH1-209ENST00000462944 SBNO1A3KN83 1393 aa13.67□□□□□ -0.22
MDH1-209ENST00000462944 HRCP23327 699 aa13.66□□□□□ -0.22
MDH1-209ENST00000462944 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
MDH1-209ENST00000462944 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
MDH1-209ENST00000462944 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
MDH1-209ENST00000462944 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
MDH1-209ENST00000462944 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
MDH1-209ENST00000462944 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
MDH1-209ENST00000462944 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
MDH1-209ENST00000462944 DEFB132Q7Z7B7 95 aa13.64□□□□□ -0.23
MDH1-209ENST00000462944 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
MDH1-209ENST00000462944 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
MDH1-209ENST00000462944 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
MDH1-209ENST00000462944 ADGRB2O60241 1585 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 TNS1Q9HBL0 1735 aaKnown RBP13.62□□□□□ -0.23
MDH1-209ENST00000462944 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
MDH1-209ENST00000462944 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 DISP2A7MBM2 1401 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 ALS2Q96Q42 1657 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
MDH1-209ENST00000462944 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
MDH1-209ENST00000462944 ANKARQ7Z5J8 1434 aa13.61□□□□□ -0.23
MDH1-209ENST00000462944 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
MDH1-209ENST00000462944 STK26Q9P289 416 aa13.6□□□□□ -0.23
MDH1-209ENST00000462944 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
MDH1-209ENST00000462944 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
MDH1-209ENST00000462944 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
MDH1-209ENST00000462944 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
MDH1-209ENST00000462944 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.23
MDH1-209ENST00000462944 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.23
MDH1-209ENST00000462944 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
MDH1-209ENST00000462944 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms