RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ABCC11Q96J66 1382 aa26.55■■□□□ 1.84
SSB-206ENST00000461708 KNDC1Q76NI1 1749 aa26.53■■□□□ 1.84
SSB-206ENST00000461708 AFF2P51816 1311 aa26.52■■□□□ 1.84
SSB-206ENST00000461708 CDK12Q9NYV4 1490 aaPredicted RBP26.52■■□□□ 1.84
SSB-206ENST00000461708 RXRBP28702 533 aa26.51■■□□□ 1.83
SSB-206ENST00000461708 SIRT1Q96EB6 747 aa26.49■■□□□ 1.83
SSB-206ENST00000461708 NRXN1Q9ULB1 1477 aa26.48■■□□□ 1.83
SSB-206ENST00000461708 STK26Q9P289 416 aa26.47■■□□□ 1.83
SSB-206ENST00000461708 MYOM2P54296 1465 aa26.47■■□□□ 1.83
SSB-206ENST00000461708 NPHP3Q7Z494 1330 aa26.46■■□□□ 1.83
SSB-206ENST00000461708 C14orf93Q9H972 538 aaKnown RBP26.46■■□□□ 1.83
SSB-206ENST00000461708 YTHDC2Q9H6S0 1430 aaKnown RBP26.46■■□□□ 1.83
SSB-206ENST00000461708 RAB3GAP2Q9H2M9 1393 aa26.46■■□□□ 1.83
SSB-206ENST00000461708 TMEM132EQ6IEE7 984 aa26.45■■□□□ 1.82
SSB-206ENST00000461708 WAPLQ7Z5K2 1190 aa26.45■■□□□ 1.82
SSB-206ENST00000461708 C8orf37Q96NL8 207 aa26.45■■□□□ 1.82
SSB-206ENST00000461708 COL22A1Q8NFW1 1626 aaPredicted RBP26.45■■□□□ 1.82
SSB-206ENST00000461708 ESCO1Q5FWF5 840 aa26.44■■□□□ 1.82
SSB-206ENST00000461708 PXDNQ92626 1479 aa26.42■■□□□ 1.82
SSB-206ENST00000461708 RBM6P78332 1123 aaKnown RBP26.4■■□□□ 1.82
SSB-206ENST00000461708 NGLY1Q96IV0 654 aa26.4■■□□□ 1.82
SSB-206ENST00000461708 QTRT2Q9H974 415 aaKnown RBP26.4■■□□□ 1.82
SSB-206ENST00000461708 PLEKHH1Q9ULM0 1364 aa26.4■■□□□ 1.82
SSB-206ENST00000461708 DHX57Q6P158 1386 aaKnown RBP26.39■■□□□ 1.82
SSB-206ENST00000461708 ADAMTS2O95450 1211 aa26.39■■□□□ 1.82
SSB-206ENST00000461708 FMN2Q9NZ56 1722 aa26.39■■□□□ 1.81
SSB-206ENST00000461708 UPF1Q92900 1129 aaKnown RBP eCLIP26.38■■□□□ 1.81
SSB-206ENST00000461708 FOXO3O43524 673 aa26.37■■□□□ 1.81
SSB-206ENST00000461708 HRCP23327 699 aa26.37■■□□□ 1.81
SSB-206ENST00000461708 FNBP4Q8N3X1 1017 aaPredicted RBP26.36■■□□□ 1.81
SSB-206ENST00000461708 CFAP70Q5T0N1 1121 aa26.35■■□□□ 1.81
SSB-206ENST00000461708 KIF1AQ12756 1690 aa26.34■■□□□ 1.81
SSB-206ENST00000461708 DLC1Q96QB1 1528 aa26.32■■□□□ 1.8
SSB-206ENST00000461708 NUTM2FA1L443 756 aa26.31■■□□□ 1.8
SSB-206ENST00000461708 STAC3Q96MF2 364 aa26.31■■□□□ 1.8
SSB-206ENST00000461708 USP21Q9UK80 565 aa26.31■■□□□ 1.8
SSB-206ENST00000461708 RGS12O14924 1447 aa26.31■■□□□ 1.8
SSB-206ENST00000461708 TRPC5Q9UL62 973 aaPredicted RBP26.3■■□□□ 1.8
SSB-206ENST00000461708 MARF1Q9Y4F3 1742 aaKnown RBP26.28■■□□□ 1.8
SSB-206ENST00000461708 XPCQ01831 940 aaPredicted RBP26.28■■□□□ 1.8
SSB-206ENST00000461708 SPATA31A3Q5VYP0 1347 aa26.27■■□□□ 1.8
SSB-206ENST00000461708 ADGRB1O14514 1584 aa26.27■■□□□ 1.8
SSB-206ENST00000461708 ATRNO75882 1429 aa26.26■■□□□ 1.79
SSB-206ENST00000461708 PRAM1Q96QH2 718 aa26.26■■□□□ 1.79
SSB-206ENST00000461708 PHF8Q9UPP1 1060 aa26.24■■□□□ 1.79
SSB-206ENST00000461708 RGPD8O14715 1765 aaPredicted RBP26.24■■□□□ 1.79
SSB-206ENST00000461708 KRT28Q7Z3Y7 464 aa26.23■■□□□ 1.79
SSB-206ENST00000461708 ADGRB2O60241 1585 aa26.23■■□□□ 1.79
SSB-206ENST00000461708 BCL9LQ86UU0 1499 aa26.23■■□□□ 1.79
SSB-206ENST00000461708 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
SSB-206ENST00000461708 POGKQ9P215 609 aa26.22■■□□□ 1.79
SSB-206ENST00000461708 PSME1Q06323 249 aa26.21■■□□□ 1.79
SSB-206ENST00000461708 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.78
SSB-206ENST00000461708 TNS3Q68CZ2 1445 aa26.19■■□□□ 1.78
SSB-206ENST00000461708 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
SSB-206ENST00000461708 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.18■■□□□ 1.78
SSB-206ENST00000461708 SAFB2Q14151 953 aaKnown RBP eCLIP26.17■■□□□ 1.78
SSB-206ENST00000461708 ATAD2Q6PL18 1390 aa26.17■■□□□ 1.78
SSB-206ENST00000461708 USP32Q8NFA0 1604 aa26.16■■□□□ 1.78
SSB-206ENST00000461708 EIF3AQ14152 1382 aaKnown RBP26.16■■□□□ 1.78
SSB-206ENST00000461708 TRAK1Q9UPV9 953 aa26.15■■□□□ 1.78
SSB-206ENST00000461708 KDM2AQ9Y2K7 1162 aa26.15■■□□□ 1.78
SSB-206ENST00000461708 SLIT2O94813 1529 aa26.14■■□□□ 1.78
SSB-206ENST00000461708 ARHGEF10O15013 1369 aa26.14■■□□□ 1.78
SSB-206ENST00000461708 GJD4Q96KN9 370 aaPredicted RBP26.13■■□□□ 1.77
SSB-206ENST00000461708 UNC5CLQ8IV45 518 aa26.12■■□□□ 1.77
SSB-206ENST00000461708 EP400Q96L91 3159 aa26.1■■□□□ 1.77
SSB-206ENST00000461708 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
SSB-206ENST00000461708 WASLO00401 505 aaPredicted RBP26.08■■□□□ 1.77
SSB-206ENST00000461708 PMFBP1Q8TBY8 1022 aa26.07■■□□□ 1.76
SSB-206ENST00000461708 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
SSB-206ENST00000461708 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
SSB-206ENST00000461708 ABCA3Q99758 1704 aa26.06■■□□□ 1.76
SSB-206ENST00000461708 HAP1P54257 671 aaPredicted RBP26.06■■□□□ 1.76
SSB-206ENST00000461708 TRPM3Q9HCF6 1732 aaPredicted RBP26.05■■□□□ 1.76
SSB-206ENST00000461708 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
SSB-206ENST00000461708 RALGAPBQ86X10 1494 aa26.05■■□□□ 1.76
SSB-206ENST00000461708 PRR36Q9H6K5 1346 aa26.05■■□□□ 1.76
SSB-206ENST00000461708 GPRASP1Q5JY77 1395 aa26.05■■□□□ 1.76
SSB-206ENST00000461708 ARHGEF28Q8N1W1 1705 aaKnown RBP26.05■■□□□ 1.76
SSB-206ENST00000461708 CCDC125Q86Z20 511 aa26.04■■□□□ 1.76
SSB-206ENST00000461708 CABLES1Q8TDN4 633 aa26.04■■□□□ 1.76
SSB-206ENST00000461708 GLI3P10071 1580 aa26.03■■□□□ 1.76
SSB-206ENST00000461708 KIAA1210Q9ULL0 1709 aa26.03■■□□□ 1.76
SSB-206ENST00000461708 LMOD2Q6P5Q4 547 aa26.02■■□□□ 1.76
SSB-206ENST00000461708 VPS72Q15906 364 aa26.01■■□□□ 1.75
SSB-206ENST00000461708 PLCH1Q4KWH8 1693 aa26.01■■□□□ 1.75
SSB-206ENST00000461708 ALS2Q96Q42 1657 aa26.01■■□□□ 1.75
SSB-206ENST00000461708 ITSN1Q15811 1721 aa25.99■■□□□ 1.75
SSB-206ENST00000461708 ONECUT3O60422 494 aaPredicted RBP25.97■■□□□ 1.75
SSB-206ENST00000461708 ATP7BP35670 1465 aa25.97■■□□□ 1.75
SSB-206ENST00000461708 FAM83GA6ND36 823 aa25.96■■□□□ 1.75
SSB-206ENST00000461708 NGDNQ8NEJ9 315 aaKnown RBP25.96■■□□□ 1.75
SSB-206ENST00000461708 NUDT16Q96DE0 195 aaKnown RBP25.94■■□□□ 1.74
SSB-206ENST00000461708 COL14A1Q05707 1796 aaKnown RBP25.92■■□□□ 1.74
SSB-206ENST00000461708 BRWD3Q6RI45 1802 aa25.91■■□□□ 1.74
SSB-206ENST00000461708 CRYBG1Q9Y4K1 1723 aa25.91■■□□□ 1.74
SSB-206ENST00000461708 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
SSB-206ENST00000461708 SEPT12Q8IYM1 358 aa25.9■■□□□ 1.74
SSB-206ENST00000461708 CDK19Q9BWU1 502 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms