RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
NUP50-213ENST00000461437 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
NUP50-213ENST00000461437 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
NUP50-213ENST00000461437 TECPR2O15040 1411 aa22.84■■□□□ 1.25
NUP50-213ENST00000461437 LAMC1P11047 1609 aa22.84■■□□□ 1.25
NUP50-213ENST00000461437 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
NUP50-213ENST00000461437 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
NUP50-213ENST00000461437 SPATA31A6Q5VVP1 1343 aa22.83■■□□□ 1.25
NUP50-213ENST00000461437 C14orf93Q9H972 538 aaKnown RBP22.82■■□□□ 1.24
NUP50-213ENST00000461437 ABCC11Q96J66 1382 aa22.81■■□□□ 1.24
NUP50-213ENST00000461437 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
NUP50-213ENST00000461437 FMN2Q9NZ56 1722 aa22.81■■□□□ 1.24
NUP50-213ENST00000461437 PNPLA6Q8IY17 1366 aa22.79■■□□□ 1.24
NUP50-213ENST00000461437 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
NUP50-213ENST00000461437 ESCO1Q5FWF5 840 aa22.77■■□□□ 1.24
NUP50-213ENST00000461437 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
NUP50-213ENST00000461437 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
NUP50-213ENST00000461437 HRCP23327 699 aa22.76■■□□□ 1.23
NUP50-213ENST00000461437 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
NUP50-213ENST00000461437 ADGRB1O14514 1584 aa22.75■■□□□ 1.23
NUP50-213ENST00000461437 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
NUP50-213ENST00000461437 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
NUP50-213ENST00000461437 PRAM1Q96QH2 718 aa22.72■■□□□ 1.23
NUP50-213ENST00000461437 FOXO3O43524 673 aa22.7■■□□□ 1.22
NUP50-213ENST00000461437 PXDNQ92626 1479 aa22.7■■□□□ 1.22
NUP50-213ENST00000461437 AFF2P51816 1311 aa22.69■■□□□ 1.22
NUP50-213ENST00000461437 ADAMTS2O95450 1211 aa22.69■■□□□ 1.22
NUP50-213ENST00000461437 C8orf37Q96NL8 207 aa22.69■■□□□ 1.22
NUP50-213ENST00000461437 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
NUP50-213ENST00000461437 DLC1Q96QB1 1528 aa22.67■■□□□ 1.22
NUP50-213ENST00000461437 KIF1AQ12756 1690 aa22.67■■□□□ 1.22
NUP50-213ENST00000461437 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
NUP50-213ENST00000461437 COL22A1Q8NFW1 1626 aaPredicted RBP22.67■■□□□ 1.22
NUP50-213ENST00000461437 ZNF772Q68DY9 489 aaPredicted RBP22.66■■□□□ 1.22
NUP50-213ENST00000461437 POGKQ9P215 609 aa22.66■■□□□ 1.22
NUP50-213ENST00000461437 ARHGEF28Q8N1W1 1705 aaKnown RBP22.65■■□□□ 1.22
NUP50-213ENST00000461437 NPHP3Q7Z494 1330 aa22.65■■□□□ 1.22
NUP50-213ENST00000461437 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
NUP50-213ENST00000461437 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
NUP50-213ENST00000461437 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
NUP50-213ENST00000461437 MINK1Q8N4C8 1332 aaPredicted RBP22.62■■□□□ 1.21
NUP50-213ENST00000461437 ADGRB2O60241 1585 aa22.62■■□□□ 1.21
NUP50-213ENST00000461437 PLEKHG5O94827 1062 aa22.59■■□□□ 1.21
NUP50-213ENST00000461437 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
NUP50-213ENST00000461437 PMFBP1Q8TBY8 1022 aa22.58■■□□□ 1.21
NUP50-213ENST00000461437 PHF8Q9UPP1 1060 aa22.58■■□□□ 1.21
NUP50-213ENST00000461437 RXRBP28702 533 aa22.57■■□□□ 1.2
NUP50-213ENST00000461437 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
NUP50-213ENST00000461437 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
NUP50-213ENST00000461437 QTRT2Q9H974 415 aaKnown RBP22.55■■□□□ 1.2
NUP50-213ENST00000461437 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
NUP50-213ENST00000461437 PRR36Q9H6K5 1346 aa22.55■■□□□ 1.2
NUP50-213ENST00000461437 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
NUP50-213ENST00000461437 NBPF1Q3BBV0 1214 aa22.53■■□□□ 1.2
NUP50-213ENST00000461437 ABCA3Q99758 1704 aa22.53■■□□□ 1.2
NUP50-213ENST00000461437 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.19
NUP50-213ENST00000461437 RGS12O14924 1447 aa22.51■■□□□ 1.19
NUP50-213ENST00000461437 ANKARQ7Z5J8 1434 aa22.51■■□□□ 1.19
NUP50-213ENST00000461437 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
NUP50-213ENST00000461437 USP21Q9UK80 565 aa22.51■■□□□ 1.19
NUP50-213ENST00000461437 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
NUP50-213ENST00000461437 TNS3Q68CZ2 1445 aa22.5■■□□□ 1.19
NUP50-213ENST00000461437 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
NUP50-213ENST00000461437 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
NUP50-213ENST00000461437 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
NUP50-213ENST00000461437 PSME1Q06323 249 aa22.48■■□□□ 1.19
NUP50-213ENST00000461437 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
NUP50-213ENST00000461437 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
NUP50-213ENST00000461437 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
NUP50-213ENST00000461437 ITSN1Q15811 1721 aa22.47■■□□□ 1.19
NUP50-213ENST00000461437 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
NUP50-213ENST00000461437 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
NUP50-213ENST00000461437 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
NUP50-213ENST00000461437 ATP7BP35670 1465 aa22.45■■□□□ 1.18
NUP50-213ENST00000461437 ATRNO75882 1429 aa22.44■■□□□ 1.18
NUP50-213ENST00000461437 PLCH1Q4KWH8 1693 aa22.44■■□□□ 1.18
NUP50-213ENST00000461437 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
NUP50-213ENST00000461437 SBNO1A3KN83 1393 aa22.43■■□□□ 1.18
NUP50-213ENST00000461437 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
NUP50-213ENST00000461437 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.43■■□□□ 1.18
NUP50-213ENST00000461437 TOPAZ1Q8N9V7 1692 aa22.42■■□□□ 1.18
NUP50-213ENST00000461437 QRICH2Q9H0J4 1663 aa22.42■■□□□ 1.18
NUP50-213ENST00000461437 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
NUP50-213ENST00000461437 HAP1P54257 671 aaPredicted RBP22.42■■□□□ 1.18
NUP50-213ENST00000461437 UPF1Q92900 1129 aaKnown RBP eCLIP22.42■■□□□ 1.18
NUP50-213ENST00000461437 EIF3AQ14152 1382 aaKnown RBP22.41■■□□□ 1.18
NUP50-213ENST00000461437 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
NUP50-213ENST00000461437 NUDT16Q96DE0 195 aaKnown RBP22.4■■□□□ 1.18
NUP50-213ENST00000461437 CRYBG1Q9Y4K1 1723 aa22.4■■□□□ 1.18
NUP50-213ENST00000461437 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.17
NUP50-213ENST00000461437 SLIT2O94813 1529 aa22.38■■□□□ 1.17
NUP50-213ENST00000461437 GLI3P10071 1580 aa22.38■■□□□ 1.17
NUP50-213ENST00000461437 ARHGEF10O15013 1369 aa22.38■■□□□ 1.17
NUP50-213ENST00000461437 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
NUP50-213ENST00000461437 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
NUP50-213ENST00000461437 BRWD3Q6RI45 1802 aa22.35■■□□□ 1.17
NUP50-213ENST00000461437 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
NUP50-213ENST00000461437 CENPJQ9HC77 1338 aaPredicted RBP22.33■■□□□ 1.17
NUP50-213ENST00000461437 UNC5CLQ8IV45 518 aa22.33■■□□□ 1.17
NUP50-213ENST00000461437 RALGAPBQ86X10 1494 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms