RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 SOS2Q07890 1332 aaPredicted RBP22.4■■□□□ 1.18
COL16A1-206ENST00000461217 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
COL16A1-206ENST00000461217 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
COL16A1-206ENST00000461217 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
COL16A1-206ENST00000461217 ESCO1Q5FWF5 840 aa22.39■■□□□ 1.17
COL16A1-206ENST00000461217 KNDC1Q76NI1 1749 aa22.38■■□□□ 1.17
COL16A1-206ENST00000461217 TMEM132EQ6IEE7 984 aa22.38■■□□□ 1.17
COL16A1-206ENST00000461217 TECPR2O15040 1411 aa22.38■■□□□ 1.17
COL16A1-206ENST00000461217 CDK12Q9NYV4 1490 aaPredicted RBP22.37■■□□□ 1.17
COL16A1-206ENST00000461217 WAPLQ7Z5K2 1190 aa22.37■■□□□ 1.17
COL16A1-206ENST00000461217 NGLY1Q96IV0 654 aa22.37■■□□□ 1.17
COL16A1-206ENST00000461217 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
COL16A1-206ENST00000461217 NUTM2FA1L443 756 aa22.35■■□□□ 1.17
COL16A1-206ENST00000461217 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
COL16A1-206ENST00000461217 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
COL16A1-206ENST00000461217 QTRT2Q9H974 415 aaKnown RBP22.34■■□□□ 1.17
COL16A1-206ENST00000461217 PLEKHH1Q9ULM0 1364 aa22.34■■□□□ 1.17
COL16A1-206ENST00000461217 UPF1Q92900 1129 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL16A1-206ENST00000461217 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
COL16A1-206ENST00000461217 COL22A1Q8NFW1 1626 aaPredicted RBP22.32■■□□□ 1.16
COL16A1-206ENST00000461217 FOXO3O43524 673 aa22.31■■□□□ 1.16
COL16A1-206ENST00000461217 RBM6P78332 1123 aaKnown RBP22.31■■□□□ 1.16
COL16A1-206ENST00000461217 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
COL16A1-206ENST00000461217 RGS12O14924 1447 aa22.31■■□□□ 1.16
COL16A1-206ENST00000461217 MYOM2P54296 1465 aa22.3■■□□□ 1.16
COL16A1-206ENST00000461217 PXDNQ92626 1479 aa22.3■■□□□ 1.16
COL16A1-206ENST00000461217 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
COL16A1-206ENST00000461217 USP21Q9UK80 565 aa22.29■■□□□ 1.16
COL16A1-206ENST00000461217 C14orf93Q9H972 538 aaKnown RBP22.28■■□□□ 1.16
COL16A1-206ENST00000461217 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
COL16A1-206ENST00000461217 KIF1AQ12756 1690 aa22.27■■□□□ 1.16
COL16A1-206ENST00000461217 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.16
COL16A1-206ENST00000461217 NRXN1Q9ULB1 1477 aa22.27■■□□□ 1.16
COL16A1-206ENST00000461217 TRPC5Q9UL62 973 aaPredicted RBP22.24■■□□□ 1.15
COL16A1-206ENST00000461217 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
COL16A1-206ENST00000461217 SIRT1Q96EB6 747 aa22.23■■□□□ 1.15
COL16A1-206ENST00000461217 MARF1Q9Y4F3 1742 aaKnown RBP22.22■■□□□ 1.15
COL16A1-206ENST00000461217 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
COL16A1-206ENST00000461217 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
COL16A1-206ENST00000461217 POGKQ9P215 609 aa22.2■■□□□ 1.14
COL16A1-206ENST00000461217 ATRNO75882 1429 aa22.18■■□□□ 1.14
COL16A1-206ENST00000461217 SPATA31A3Q5VYP0 1347 aa22.18■■□□□ 1.14
COL16A1-206ENST00000461217 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
COL16A1-206ENST00000461217 PHF8Q9UPP1 1060 aa22.18■■□□□ 1.14
COL16A1-206ENST00000461217 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
COL16A1-206ENST00000461217 DLC1Q96QB1 1528 aa22.17■■□□□ 1.14
COL16A1-206ENST00000461217 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
COL16A1-206ENST00000461217 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
COL16A1-206ENST00000461217 ATAD2Q6PL18 1390 aa22.15■■□□□ 1.14
COL16A1-206ENST00000461217 BCL9LQ86UU0 1499 aa22.15■■□□□ 1.14
COL16A1-206ENST00000461217 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
COL16A1-206ENST00000461217 PSME1Q06323 249 aa22.14■■□□□ 1.13
COL16A1-206ENST00000461217 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.13
COL16A1-206ENST00000461217 TNS3Q68CZ2 1445 aa22.14■■□□□ 1.13
COL16A1-206ENST00000461217 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
COL16A1-206ENST00000461217 TRAK1Q9UPV9 953 aa22.13■■□□□ 1.13
COL16A1-206ENST00000461217 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
COL16A1-206ENST00000461217 LMOD2Q6P5Q4 547 aa22.12■■□□□ 1.13
COL16A1-206ENST00000461217 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
COL16A1-206ENST00000461217 ANKARQ7Z5J8 1434 aa22.11■■□□□ 1.13
COL16A1-206ENST00000461217 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.11■■□□□ 1.13
COL16A1-206ENST00000461217 HIRIP3Q9BW71 556 aaPredicted RBP22.1■■□□□ 1.13
COL16A1-206ENST00000461217 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
COL16A1-206ENST00000461217 GJD4Q96KN9 370 aaPredicted RBP22.09■■□□□ 1.13
COL16A1-206ENST00000461217 MINK1Q8N4C8 1332 aaPredicted RBP22.08■■□□□ 1.13
COL16A1-206ENST00000461217 SBNO1A3KN83 1393 aa22.08■■□□□ 1.12
COL16A1-206ENST00000461217 SLIT2O94813 1529 aa22.07■■□□□ 1.12
COL16A1-206ENST00000461217 UNC5CLQ8IV45 518 aa22.07■■□□□ 1.12
COL16A1-206ENST00000461217 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
COL16A1-206ENST00000461217 ARHGEF10O15013 1369 aa22.07■■□□□ 1.12
COL16A1-206ENST00000461217 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
COL16A1-206ENST00000461217 HRCP23327 699 aa22.06■■□□□ 1.12
COL16A1-206ENST00000461217 STAC3Q96MF2 364 aa22.06■■□□□ 1.12
COL16A1-206ENST00000461217 ABCA3Q99758 1704 aa22.05■■□□□ 1.12
COL16A1-206ENST00000461217 RALGAPBQ86X10 1494 aa22.04■■□□□ 1.12
COL16A1-206ENST00000461217 TULP4Q9NRJ4 1543 aa22.04■■□□□ 1.12
COL16A1-206ENST00000461217 GLI3P10071 1580 aa22.04■■□□□ 1.12
COL16A1-206ENST00000461217 PLCH1Q4KWH8 1693 aa22.03■■□□□ 1.12
COL16A1-206ENST00000461217 GPRASP1Q5JY77 1395 aa22.02■■□□□ 1.12
COL16A1-206ENST00000461217 WASLO00401 505 aaPredicted RBP22.01■■□□□ 1.11
COL16A1-206ENST00000461217 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
COL16A1-206ENST00000461217 PRR36Q9H6K5 1346 aa22.01■■□□□ 1.11
COL16A1-206ENST00000461217 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
COL16A1-206ENST00000461217 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
COL16A1-206ENST00000461217 NWD2Q9ULI1 1742 aa21.99■■□□□ 1.11
COL16A1-206ENST00000461217 NGDNQ8NEJ9 315 aaKnown RBP21.98■■□□□ 1.11
COL16A1-206ENST00000461217 ALS2Q96Q42 1657 aa21.96■■□□□ 1.11
COL16A1-206ENST00000461217 TRIM26Q12899 539 aaPredicted RBP21.96■■□□□ 1.11
COL16A1-206ENST00000461217 VPS72Q15906 364 aa21.96■■□□□ 1.11
COL16A1-206ENST00000461217 ITSN1Q15811 1721 aa21.96■■□□□ 1.11
COL16A1-206ENST00000461217 PAK3O75914 559 aaPredicted RBP21.95■■□□□ 1.1
COL16A1-206ENST00000461217 CCDC125Q86Z20 511 aa21.95■■□□□ 1.1
COL16A1-206ENST00000461217 A0A0G2JS52 829 aa21.93■■□□□ 1.1
COL16A1-206ENST00000461217 FAM83GA6ND36 823 aa21.93■■□□□ 1.1
COL16A1-206ENST00000461217 ATP7BP35670 1465 aa21.93■■□□□ 1.1
COL16A1-206ENST00000461217 MYT1Q01538 1121 aa21.93■■□□□ 1.1
COL16A1-206ENST00000461217 SEPT12Q8IYM1 358 aa21.93■■□□□ 1.1
COL16A1-206ENST00000461217 BRWD3Q6RI45 1802 aa21.92■■□□□ 1.1
COL16A1-206ENST00000461217 NUDT16Q96DE0 195 aaKnown RBP21.91■■□□□ 1.1
COL16A1-206ENST00000461217 COL14A1Q05707 1796 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms