RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PXDNQ92626 1479 aa18.2■□□□□ 0.5
HCFC1-204ENST00000461098 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
HCFC1-204ENST00000461098 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
HCFC1-204ENST00000461098 HFM1A2PYH4 1435 aa18.16■□□□□ 0.5
HCFC1-204ENST00000461098 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
HCFC1-204ENST00000461098 GJD4Q96KN9 370 aaPredicted RBP18.16■□□□□ 0.5
HCFC1-204ENST00000461098 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
HCFC1-204ENST00000461098 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
HCFC1-204ENST00000461098 FOXD1Q16676 465 aa18.13■□□□□ 0.49
HCFC1-204ENST00000461098 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
HCFC1-204ENST00000461098 GLI3P10071 1580 aa18.13■□□□□ 0.49
HCFC1-204ENST00000461098 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.12■□□□□ 0.49
HCFC1-204ENST00000461098 FOXO3O43524 673 aa18.12■□□□□ 0.49
HCFC1-204ENST00000461098 XPCQ01831 940 aaPredicted RBP18.12■□□□□ 0.49
HCFC1-204ENST00000461098 PPLO60437 1756 aa18.12■□□□□ 0.49
HCFC1-204ENST00000461098 SLIT2O94813 1529 aa18.11■□□□□ 0.49
HCFC1-204ENST00000461098 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
HCFC1-204ENST00000461098 RALGAPBQ86X10 1494 aa18.09■□□□□ 0.49
HCFC1-204ENST00000461098 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
HCFC1-204ENST00000461098 BLMP54132 1417 aaPredicted RBP18.08■□□□□ 0.49
HCFC1-204ENST00000461098 NAIPQ13075 1403 aa18.08■□□□□ 0.49
HCFC1-204ENST00000461098 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
HCFC1-204ENST00000461098 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
HCFC1-204ENST00000461098 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
HCFC1-204ENST00000461098 PPARGC1BQ86YN6 1023 aaKnown RBP18.06■□□□□ 0.48
HCFC1-204ENST00000461098 TECPR2O15040 1411 aa18.05■□□□□ 0.48
HCFC1-204ENST00000461098 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
HCFC1-204ENST00000461098 ADGRF5Q8IZF2 1346 aa18.04■□□□□ 0.48
HCFC1-204ENST00000461098 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
HCFC1-204ENST00000461098 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
HCFC1-204ENST00000461098 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
HCFC1-204ENST00000461098 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
HCFC1-204ENST00000461098 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
HCFC1-204ENST00000461098 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
HCFC1-204ENST00000461098 LRP5O75197 1615 aa18.01■□□□□ 0.47
HCFC1-204ENST00000461098 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
HCFC1-204ENST00000461098 STK26Q9P289 416 aa18■□□□□ 0.47
HCFC1-204ENST00000461098 ABCC11Q96J66 1382 aa18■□□□□ 0.47
HCFC1-204ENST00000461098 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
HCFC1-204ENST00000461098 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
HCFC1-204ENST00000461098 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
HCFC1-204ENST00000461098 VPS72Q15906 364 aa17.98■□□□□ 0.47
HCFC1-204ENST00000461098 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
HCFC1-204ENST00000461098 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
HCFC1-204ENST00000461098 TMEM132EQ6IEE7 984 aa17.97■□□□□ 0.47
HCFC1-204ENST00000461098 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
HCFC1-204ENST00000461098 IFT172Q9UG01 1749 aa17.97■□□□□ 0.47
HCFC1-204ENST00000461098 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
HCFC1-204ENST00000461098 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
HCFC1-204ENST00000461098 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
HCFC1-204ENST00000461098 CABLES1Q8TDN4 633 aa17.96■□□□□ 0.47
HCFC1-204ENST00000461098 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
HCFC1-204ENST00000461098 ABCA3Q99758 1704 aa17.95■□□□□ 0.46
HCFC1-204ENST00000461098 TNS3Q68CZ2 1445 aa17.94■□□□□ 0.46
HCFC1-204ENST00000461098 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
HCFC1-204ENST00000461098 SF3B2Q13435 895 aaKnown RBP17.93■□□□□ 0.46
HCFC1-204ENST00000461098 KRT27Q7Z3Y8 459 aa17.93■□□□□ 0.46
HCFC1-204ENST00000461098 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
HCFC1-204ENST00000461098 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 HRCP23327 699 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 SIRT1Q96EB6 747 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
HCFC1-204ENST00000461098 NRXN1Q9ULB1 1477 aa17.9■□□□□ 0.46
HCFC1-204ENST00000461098 PSDA5PKW4 1024 aaPredicted RBP17.9■□□□□ 0.46
HCFC1-204ENST00000461098 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
HCFC1-204ENST00000461098 PSME1Q06323 249 aa17.88■□□□□ 0.45
HCFC1-204ENST00000461098 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
HCFC1-204ENST00000461098 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
HCFC1-204ENST00000461098 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
HCFC1-204ENST00000461098 ARHGEF10O15013 1369 aa17.85■□□□□ 0.45
HCFC1-204ENST00000461098 BAG6P46379 1132 aa17.85■□□□□ 0.45
HCFC1-204ENST00000461098 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
HCFC1-204ENST00000461098 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
HCFC1-204ENST00000461098 TRPM3Q9HCF6 1732 aaPredicted RBP17.84■□□□□ 0.45
HCFC1-204ENST00000461098 EN1Q05925 392 aaPredicted RBP17.83■□□□□ 0.44
HCFC1-204ENST00000461098 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
HCFC1-204ENST00000461098 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
HCFC1-204ENST00000461098 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
HCFC1-204ENST00000461098 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
HCFC1-204ENST00000461098 ALS2Q96Q42 1657 aa17.81■□□□□ 0.44
HCFC1-204ENST00000461098 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
HCFC1-204ENST00000461098 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
HCFC1-204ENST00000461098 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
HCFC1-204ENST00000461098 TNS1Q9HBL0 1735 aaKnown RBP17.81■□□□□ 0.44
HCFC1-204ENST00000461098 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
HCFC1-204ENST00000461098 SAFB2Q14151 953 aaKnown RBP eCLIP17.8■□□□□ 0.44
HCFC1-204ENST00000461098 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
HCFC1-204ENST00000461098 COL14A1Q05707 1796 aaKnown RBP17.8■□□□□ 0.44
HCFC1-204ENST00000461098 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
HCFC1-204ENST00000461098 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
HCFC1-204ENST00000461098 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
HCFC1-204ENST00000461098 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
HCFC1-204ENST00000461098 CRYBG1Q9Y4K1 1723 aa17.79■□□□□ 0.44
HCFC1-204ENST00000461098 A0A0G2JS52 829 aa17.79■□□□□ 0.44
HCFC1-204ENST00000461098 MYT1Q01538 1121 aa17.79■□□□□ 0.44
HCFC1-204ENST00000461098 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
HCFC1-204ENST00000461098 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms