RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TECPR2O15040 1411 aa19.2■□□□□ 0.66
RAB11FIP3-207ENST00000461009 WAPLQ7Z5K2 1190 aa19.2■□□□□ 0.66
RAB11FIP3-207ENST00000461009 NHSL1Q5SYE7 1610 aa19.2■□□□□ 0.66
RAB11FIP3-207ENST00000461009 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
RAB11FIP3-207ENST00000461009 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
RAB11FIP3-207ENST00000461009 STAC3Q96MF2 364 aa19.19■□□□□ 0.66
RAB11FIP3-207ENST00000461009 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
RAB11FIP3-207ENST00000461009 YTHDC2Q9H6S0 1430 aaKnown RBP19.18■□□□□ 0.66
RAB11FIP3-207ENST00000461009 MYOM2P54296 1465 aa19.18■□□□□ 0.66
RAB11FIP3-207ENST00000461009 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
RAB11FIP3-207ENST00000461009 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
RAB11FIP3-207ENST00000461009 NPHP3Q7Z494 1330 aa19.16■□□□□ 0.66
RAB11FIP3-207ENST00000461009 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 LRP6O75581 1613 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 LAMC1P11047 1609 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
RAB11FIP3-207ENST00000461009 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.66
RAB11FIP3-207ENST00000461009 POGKQ9P215 609 aa19.14■□□□□ 0.65
RAB11FIP3-207ENST00000461009 SOS2Q07890 1332 aaPredicted RBP19.14■□□□□ 0.65
RAB11FIP3-207ENST00000461009 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
RAB11FIP3-207ENST00000461009 NUTM2FA1L443 756 aa19.12■□□□□ 0.65
RAB11FIP3-207ENST00000461009 PLEKHH1Q9ULM0 1364 aa19.11■□□□□ 0.65
RAB11FIP3-207ENST00000461009 C8orf37Q96NL8 207 aa19.11■□□□□ 0.65
RAB11FIP3-207ENST00000461009 FOXO3O43524 673 aa19.1■□□□□ 0.65
RAB11FIP3-207ENST00000461009 RXRBP28702 533 aa19.1■□□□□ 0.65
RAB11FIP3-207ENST00000461009 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
RAB11FIP3-207ENST00000461009 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
RAB11FIP3-207ENST00000461009 AFF2P51816 1311 aa19.09■□□□□ 0.65
RAB11FIP3-207ENST00000461009 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
RAB11FIP3-207ENST00000461009 SIN3AQ96ST3 1273 aa19.09■□□□□ 0.65
RAB11FIP3-207ENST00000461009 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
RAB11FIP3-207ENST00000461009 SAFB2Q14151 953 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB11FIP3-207ENST00000461009 TRAK1Q9UPV9 953 aa19.06■□□□□ 0.64
RAB11FIP3-207ENST00000461009 PSME1Q06323 249 aa19.05■□□□□ 0.64
RAB11FIP3-207ENST00000461009 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
RAB11FIP3-207ENST00000461009 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
RAB11FIP3-207ENST00000461009 QTRT2Q9H974 415 aaKnown RBP19.04■□□□□ 0.64
RAB11FIP3-207ENST00000461009 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
RAB11FIP3-207ENST00000461009 PHF8Q9UPP1 1060 aa19.03■□□□□ 0.64
RAB11FIP3-207ENST00000461009 KRT28Q7Z3Y7 464 aa19.02■□□□□ 0.64
RAB11FIP3-207ENST00000461009 EIF3AQ14152 1382 aaKnown RBP19.02■□□□□ 0.64
RAB11FIP3-207ENST00000461009 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
RAB11FIP3-207ENST00000461009 L3MBTL2Q969R5 705 aa19.01■□□□□ 0.63
RAB11FIP3-207ENST00000461009 PXDNQ92626 1479 aa19.01■□□□□ 0.63
RAB11FIP3-207ENST00000461009 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
RAB11FIP3-207ENST00000461009 USP21Q9UK80 565 aa19■□□□□ 0.63
RAB11FIP3-207ENST00000461009 ADGRB1O14514 1584 aa18.99■□□□□ 0.63
RAB11FIP3-207ENST00000461009 HAP1P54257 671 aaPredicted RBP18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 TRPC5Q9UL62 973 aaPredicted RBP18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 COL22A1Q8NFW1 1626 aaPredicted RBP18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 SPATA31A3Q5VYP0 1347 aa18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
RAB11FIP3-207ENST00000461009 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
RAB11FIP3-207ENST00000461009 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
RAB11FIP3-207ENST00000461009 ANKARQ7Z5J8 1434 aa18.97■□□□□ 0.63
RAB11FIP3-207ENST00000461009 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
RAB11FIP3-207ENST00000461009 TONSLQ96HA7 1378 aa18.95■□□□□ 0.62
RAB11FIP3-207ENST00000461009 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
RAB11FIP3-207ENST00000461009 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
RAB11FIP3-207ENST00000461009 PMFBP1Q8TBY8 1022 aa18.94■□□□□ 0.62
RAB11FIP3-207ENST00000461009 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
RAB11FIP3-207ENST00000461009 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
RAB11FIP3-207ENST00000461009 RGPD8O14715 1765 aaPredicted RBP18.93■□□□□ 0.62
RAB11FIP3-207ENST00000461009 SBNO1A3KN83 1393 aa18.93■□□□□ 0.62
RAB11FIP3-207ENST00000461009 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
RAB11FIP3-207ENST00000461009 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
RAB11FIP3-207ENST00000461009 TNS3Q68CZ2 1445 aa18.91■□□□□ 0.62
RAB11FIP3-207ENST00000461009 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
RAB11FIP3-207ENST00000461009 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
RAB11FIP3-207ENST00000461009 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
RAB11FIP3-207ENST00000461009 UPF1Q92900 1129 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAB11FIP3-207ENST00000461009 PLEKHG5O94827 1062 aa18.87■□□□□ 0.61
RAB11FIP3-207ENST00000461009 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
RAB11FIP3-207ENST00000461009 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
RAB11FIP3-207ENST00000461009 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
RAB11FIP3-207ENST00000461009 UNC5CLQ8IV45 518 aa18.86■□□□□ 0.61
RAB11FIP3-207ENST00000461009 NUDT16Q96DE0 195 aaKnown RBP18.86■□□□□ 0.61
RAB11FIP3-207ENST00000461009 CDK19Q9BWU1 502 aa18.86■□□□□ 0.61
RAB11FIP3-207ENST00000461009 RGS12O14924 1447 aa18.85■□□□□ 0.61
RAB11FIP3-207ENST00000461009 ATRNO75882 1429 aa18.85■□□□□ 0.61
RAB11FIP3-207ENST00000461009 PAK3O75914 559 aaPredicted RBP18.85■□□□□ 0.61
RAB11FIP3-207ENST00000461009 ARHGEF28Q8N1W1 1705 aaKnown RBP18.85■□□□□ 0.61
RAB11FIP3-207ENST00000461009 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
RAB11FIP3-207ENST00000461009 PRR36Q9H6K5 1346 aa18.84■□□□□ 0.61
RAB11FIP3-207ENST00000461009 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
RAB11FIP3-207ENST00000461009 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-207ENST00000461009 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
RAB11FIP3-207ENST00000461009 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
RAB11FIP3-207ENST00000461009 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
RAB11FIP3-207ENST00000461009 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
RAB11FIP3-207ENST00000461009 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
RAB11FIP3-207ENST00000461009 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
RAB11FIP3-207ENST00000461009 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
RAB11FIP3-207ENST00000461009 SRPK2P78362 688 aaKnown RBP18.8■□□□□ 0.6
RAB11FIP3-207ENST00000461009 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
RAB11FIP3-207ENST00000461009 TRPM1Q7Z4N2 1603 aa18.8■□□□□ 0.6
RAB11FIP3-207ENST00000461009 SLIT2O94813 1529 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms