RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
DDX1-204ENST00000459706 HELBQ8NG08 1087 aaPredicted RBP9.8□□□□□ -0.84
DDX1-204ENST00000459706 ZNF330Q9Y3S2 320 aaPredicted RBP9.8□□□□□ -0.84
DDX1-204ENST00000459706 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
DDX1-204ENST00000459706 SMARCA2P51531 1590 aa9.79□□□□□ -0.84
DDX1-204ENST00000459706 USP17L8P0C7I0 530 aa9.78□□□□□ -0.84
DDX1-204ENST00000459706 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
DDX1-204ENST00000459706 CCDC82Q8N4S0 544 aa9.78□□□□□ -0.84
DDX1-204ENST00000459706 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
DDX1-204ENST00000459706 ARID3AQ99856 593 aa9.78□□□□□ -0.84
DDX1-204ENST00000459706 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
DDX1-204ENST00000459706 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
DDX1-204ENST00000459706 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
DDX1-204ENST00000459706 AXIN2Q9Y2T1 843 aa9.77□□□□□ -0.85
DDX1-204ENST00000459706 WASHC4Q2M389 1173 aa9.76□□□□□ -0.85
DDX1-204ENST00000459706 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
DDX1-204ENST00000459706 ZFRQ96KR1 1074 aaKnown RBP9.76□□□□□ -0.85
DDX1-204ENST00000459706 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
DDX1-204ENST00000459706 NDUFB9Q9Y6M9 179 aa9.76□□□□□ -0.85
DDX1-204ENST00000459706 WIZO95785 1651 aa9.76□□□□□ -0.85
DDX1-204ENST00000459706 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
DDX1-204ENST00000459706 CFHP08603 1231 aa9.75□□□□□ -0.85
DDX1-204ENST00000459706 FUT2Q10981 343 aa9.75□□□□□ -0.85
DDX1-204ENST00000459706 Q3C1V9 767 aa9.75□□□□□ -0.85
DDX1-204ENST00000459706 LRCH3Q96II8 777 aa9.74□□□□□ -0.85
DDX1-204ENST00000459706 ACTN4O43707 911 aaKnown RBP9.73□□□□□ -0.85
DDX1-204ENST00000459706 DESI1Q6ICB0 168 aa9.73□□□□□ -0.85
DDX1-204ENST00000459706 C6orf229H3BNL8 230 aa9.72□□□□□ -0.85
DDX1-204ENST00000459706 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
DDX1-204ENST00000459706 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
DDX1-204ENST00000459706 ABL2P42684 1182 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
DDX1-204ENST00000459706 STAC3Q96MF2 364 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.71□□□□□ -0.86
DDX1-204ENST00000459706 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 HMGXB3Q12766 1538 aa9.71□□□□□ -0.86
DDX1-204ENST00000459706 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX1-204ENST00000459706 ADGRD1Q6QNK2 874 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 PNMA1Q8ND90 353 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 MARVELD3Q96A59 401 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
DDX1-204ENST00000459706 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
DDX1-204ENST00000459706 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
DDX1-204ENST00000459706 MORN1Q5T089 497 aa9.69□□□□□ -0.86
DDX1-204ENST00000459706 NCAPD3P42695 1498 aa9.68□□□□□ -0.86
DDX1-204ENST00000459706 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
DDX1-204ENST00000459706 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
DDX1-204ENST00000459706 HRO43593 1189 aa9.68□□□□□ -0.86
DDX1-204ENST00000459706 RNF40O75150 1001 aa9.68□□□□□ -0.86
DDX1-204ENST00000459706 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
DDX1-204ENST00000459706 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
DDX1-204ENST00000459706 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
DDX1-204ENST00000459706 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
DDX1-204ENST00000459706 HLA-CQ95604 372 aa9.67□□□□□ -0.86
DDX1-204ENST00000459706 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
DDX1-204ENST00000459706 SOX11P35716 441 aa9.66□□□□□ -0.86
DDX1-204ENST00000459706 PDE4CQ08493 712 aa9.66□□□□□ -0.86
DDX1-204ENST00000459706 FAM163AQ96GL9 167 aaPredicted RBP9.66□□□□□ -0.86
DDX1-204ENST00000459706 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
DDX1-204ENST00000459706 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
DDX1-204ENST00000459706 PPP4CP60510 307 aa9.65□□□□□ -0.86
DDX1-204ENST00000459706 TSC1Q92574 1164 aa9.64□□□□□ -0.87
DDX1-204ENST00000459706 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
DDX1-204ENST00000459706 IRF5Q13568 498 aa9.63□□□□□ -0.87
DDX1-204ENST00000459706 GLMNQ92990 594 aa9.63□□□□□ -0.87
DDX1-204ENST00000459706 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
DDX1-204ENST00000459706 ACIN1Q9UKV3 1341 aaKnown RBP9.62□□□□□ -0.87
DDX1-204ENST00000459706 NR1I2O75469 434 aa9.62□□□□□ -0.87
DDX1-204ENST00000459706 LYPD8Q6UX82 237 aa9.62□□□□□ -0.87
DDX1-204ENST00000459706 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
DDX1-204ENST00000459706 USB1Q9BQ65 265 aaKnown RBP9.62□□□□□ -0.87
DDX1-204ENST00000459706 HMX1Q9NP08 348 aaPredicted RBP9.62□□□□□ -0.87
DDX1-204ENST00000459706 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
DDX1-204ENST00000459706 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
DDX1-204ENST00000459706 FMNL1O95466 1100 aaPredicted RBP9.6□□□□□ -0.87
DDX1-204ENST00000459706 HDGFL1Q5TGJ6 251 aa9.6□□□□□ -0.87
DDX1-204ENST00000459706 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
DDX1-204ENST00000459706 SYMPKQ92797 1274 aaKnown RBP9.59□□□□□ -0.87
DDX1-204ENST00000459706 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
DDX1-204ENST00000459706 HPS5Q9UPZ3 1129 aa9.59□□□□□ -0.87
DDX1-204ENST00000459706 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
DDX1-204ENST00000459706 POTEMA6NI47 508 aa9.58□□□□□ -0.88
DDX1-204ENST00000459706 POM121CA8CG34 1229 aa9.58□□□□□ -0.88
DDX1-204ENST00000459706 PUS10Q3MIT2 529 aaKnown RBP9.58□□□□□ -0.88
DDX1-204ENST00000459706 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
DDX1-204ENST00000459706 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
DDX1-204ENST00000459706 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
DDX1-204ENST00000459706 GPR37L1O60883 481 aa9.57□□□□□ -0.88
DDX1-204ENST00000459706 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
DDX1-204ENST00000459706 WNT2BQ93097 391 aa9.57□□□□□ -0.88
DDX1-204ENST00000459706 ALG2Q9H553 416 aa9.57□□□□□ -0.88
DDX1-204ENST00000459706 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDX1-204ENST00000459706 NR6A1Q15406 480 aa9.56□□□□□ -0.88
DDX1-204ENST00000459706 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
DDX1-204ENST00000459706 PTPRNQ16849 979 aa9.55□□□□□ -0.88
DDX1-204ENST00000459706 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms