RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 LAMC1P11047 1609 aa16.74■□□□□ 0.27
RPSA-204ENST00000458478 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
RPSA-204ENST00000458478 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
RPSA-204ENST00000458478 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
RPSA-204ENST00000458478 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPSA-204ENST00000458478 NGLY1Q96IV0 654 aa16.73■□□□□ 0.27
RPSA-204ENST00000458478 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
RPSA-204ENST00000458478 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
RPSA-204ENST00000458478 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
RPSA-204ENST00000458478 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
RPSA-204ENST00000458478 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
RPSA-204ENST00000458478 TECPR2O15040 1411 aa16.7■□□□□ 0.26
RPSA-204ENST00000458478 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
RPSA-204ENST00000458478 FOXO3O43524 673 aa16.7■□□□□ 0.26
RPSA-204ENST00000458478 C14orf93Q9H972 538 aaKnown RBP16.7■□□□□ 0.26
RPSA-204ENST00000458478 CDC42BPGQ6DT37 1551 aa16.69■□□□□ 0.26
RPSA-204ENST00000458478 RBM6P78332 1123 aaKnown RBP16.69■□□□□ 0.26
RPSA-204ENST00000458478 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
RPSA-204ENST00000458478 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
RPSA-204ENST00000458478 CDK12Q9NYV4 1490 aaPredicted RBP16.68■□□□□ 0.26
RPSA-204ENST00000458478 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
RPSA-204ENST00000458478 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
RPSA-204ENST00000458478 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
RPSA-204ENST00000458478 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
RPSA-204ENST00000458478 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
RPSA-204ENST00000458478 USP21Q9UK80 565 aa16.66■□□□□ 0.26
RPSA-204ENST00000458478 PXDNQ92626 1479 aa16.65■□□□□ 0.26
RPSA-204ENST00000458478 KNDC1Q76NI1 1749 aa16.65■□□□□ 0.26
RPSA-204ENST00000458478 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
RPSA-204ENST00000458478 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
RPSA-204ENST00000458478 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
RPSA-204ENST00000458478 RGS12O14924 1447 aa16.63■□□□□ 0.25
RPSA-204ENST00000458478 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
RPSA-204ENST00000458478 MYOM2P54296 1465 aa16.61■□□□□ 0.25
RPSA-204ENST00000458478 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPSA-204ENST00000458478 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
RPSA-204ENST00000458478 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
RPSA-204ENST00000458478 FMN2Q9NZ56 1722 aa16.61■□□□□ 0.25
RPSA-204ENST00000458478 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
RPSA-204ENST00000458478 PHF8Q9UPP1 1060 aa16.59■□□□□ 0.25
RPSA-204ENST00000458478 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
RPSA-204ENST00000458478 POGKQ9P215 609 aa16.58■□□□□ 0.24
RPSA-204ENST00000458478 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
RPSA-204ENST00000458478 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.24
RPSA-204ENST00000458478 ATRNO75882 1429 aa16.57■□□□□ 0.24
RPSA-204ENST00000458478 HRCP23327 699 aa16.57■□□□□ 0.24
RPSA-204ENST00000458478 DCAF11Q8TEB1 546 aa16.57■□□□□ 0.24
RPSA-204ENST00000458478 TRAK1Q9UPV9 953 aa16.56■□□□□ 0.24
RPSA-204ENST00000458478 PSME1Q06323 249 aa16.55■□□□□ 0.24
RPSA-204ENST00000458478 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
RPSA-204ENST00000458478 MARF1Q9Y4F3 1742 aaKnown RBP16.54■□□□□ 0.24
RPSA-204ENST00000458478 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
RPSA-204ENST00000458478 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
RPSA-204ENST00000458478 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
RPSA-204ENST00000458478 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
RPSA-204ENST00000458478 ADGRB1O14514 1584 aa16.52■□□□□ 0.24
RPSA-204ENST00000458478 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
RPSA-204ENST00000458478 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
RPSA-204ENST00000458478 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.24
RPSA-204ENST00000458478 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
RPSA-204ENST00000458478 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
RPSA-204ENST00000458478 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
RPSA-204ENST00000458478 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
RPSA-204ENST00000458478 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
RPSA-204ENST00000458478 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
RPSA-204ENST00000458478 SLIT2O94813 1529 aa16.5■□□□□ 0.23
RPSA-204ENST00000458478 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
RPSA-204ENST00000458478 USP32Q8NFA0 1604 aa16.48■□□□□ 0.23
RPSA-204ENST00000458478 ANKARQ7Z5J8 1434 aa16.48■□□□□ 0.23
RPSA-204ENST00000458478 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
RPSA-204ENST00000458478 PRR36Q9H6K5 1346 aa16.46■□□□□ 0.23
RPSA-204ENST00000458478 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
RPSA-204ENST00000458478 ARHGEF10O15013 1369 aa16.46■□□□□ 0.23
RPSA-204ENST00000458478 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
RPSA-204ENST00000458478 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
RPSA-204ENST00000458478 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
RPSA-204ENST00000458478 GLI3P10071 1580 aa16.44■□□□□ 0.22
RPSA-204ENST00000458478 VPS72Q15906 364 aa16.44■□□□□ 0.22
RPSA-204ENST00000458478 EP400Q96L91 3159 aa16.43■□□□□ 0.22
RPSA-204ENST00000458478 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
RPSA-204ENST00000458478 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
RPSA-204ENST00000458478 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
RPSA-204ENST00000458478 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
RPSA-204ENST00000458478 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
RPSA-204ENST00000458478 ONECUT3O60422 494 aaPredicted RBP16.41■□□□□ 0.22
RPSA-204ENST00000458478 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
RPSA-204ENST00000458478 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
RPSA-204ENST00000458478 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
RPSA-204ENST00000458478 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
RPSA-204ENST00000458478 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
RPSA-204ENST00000458478 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
RPSA-204ENST00000458478 CDK19Q9BWU1 502 aa16.39■□□□□ 0.21
RPSA-204ENST00000458478 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
RPSA-204ENST00000458478 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
RPSA-204ENST00000458478 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
RPSA-204ENST00000458478 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
RPSA-204ENST00000458478 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
RPSA-204ENST00000458478 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
RPSA-204ENST00000458478 BRWD3Q6RI45 1802 aa16.37■□□□□ 0.21
RPSA-204ENST00000458478 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms