RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 CCDC125Q86Z20 511 aa24.83■■□□□ 1.57
SHF-202ENST00000458022 BCL9LQ86UU0 1499 aa24.82■■□□□ 1.56
SHF-202ENST00000458022 NPHP3Q7Z494 1330 aa24.81■■□□□ 1.56
SHF-202ENST00000458022 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
SHF-202ENST00000458022 PXDNQ92626 1479 aa24.77■■□□□ 1.56
SHF-202ENST00000458022 ESCO1Q5FWF5 840 aa24.77■■□□□ 1.56
SHF-202ENST00000458022 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
SHF-202ENST00000458022 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
SHF-202ENST00000458022 KIF1BO60333 1816 aa24.75■■□□□ 1.55
SHF-202ENST00000458022 EP400Q96L91 3159 aa24.72■■□□□ 1.55
SHF-202ENST00000458022 FOXO3O43524 673 aa24.72■■□□□ 1.55
SHF-202ENST00000458022 NAIPQ13075 1403 aa24.71■■□□□ 1.55
SHF-202ENST00000458022 LRPPRCP42704 1394 aaKnown RBP24.7■■□□□ 1.55
SHF-202ENST00000458022 XPCQ01831 940 aaPredicted RBP24.7■■□□□ 1.54
SHF-202ENST00000458022 UNC5CLQ8IV45 518 aa24.68■■□□□ 1.54
SHF-202ENST00000458022 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
SHF-202ENST00000458022 SLIT2O94813 1529 aa24.66■■□□□ 1.54
SHF-202ENST00000458022 RALGAPBQ86X10 1494 aa24.66■■□□□ 1.54
SHF-202ENST00000458022 TECPR2O15040 1411 aa24.66■■□□□ 1.54
SHF-202ENST00000458022 PPARGC1BQ86YN6 1023 aaKnown RBP24.65■■□□□ 1.54
SHF-202ENST00000458022 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.54
SHF-202ENST00000458022 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.64■■□□□ 1.53
SHF-202ENST00000458022 SPATA31A3Q5VYP0 1347 aa24.63■■□□□ 1.53
SHF-202ENST00000458022 GLI3P10071 1580 aa24.63■■□□□ 1.53
SHF-202ENST00000458022 PPLO60437 1756 aa24.62■■□□□ 1.53
SHF-202ENST00000458022 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
SHF-202ENST00000458022 NUTM2FA1L443 756 aa24.61■■□□□ 1.53
SHF-202ENST00000458022 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
SHF-202ENST00000458022 SLC4A1APQ9BWU0 796 aaKnown RBP24.61■■□□□ 1.53
SHF-202ENST00000458022 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
SHF-202ENST00000458022 ABCC11Q96J66 1382 aa24.6■■□□□ 1.53
SHF-202ENST00000458022 STK26Q9P289 416 aa24.59■■□□□ 1.53
SHF-202ENST00000458022 CCDC144AA2RUR9 1427 aa24.59■■□□□ 1.53
SHF-202ENST00000458022 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
SHF-202ENST00000458022 PLEKHH1Q9ULM0 1364 aa24.57■■□□□ 1.52
SHF-202ENST00000458022 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
SHF-202ENST00000458022 VPS72Q15906 364 aa24.55■■□□□ 1.52
SHF-202ENST00000458022 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
SHF-202ENST00000458022 SEPT12Q8IYM1 358 aa24.55■■□□□ 1.52
SHF-202ENST00000458022 SF3B2Q13435 895 aaKnown RBP24.54■■□□□ 1.52
SHF-202ENST00000458022 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
SHF-202ENST00000458022 ONECUT3O60422 494 aaPredicted RBP24.53■■□□□ 1.52
SHF-202ENST00000458022 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
SHF-202ENST00000458022 TNS3Q68CZ2 1445 aa24.52■■□□□ 1.52
SHF-202ENST00000458022 SPATA31E1Q6ZUB1 1445 aa24.52■■□□□ 1.52
SHF-202ENST00000458022 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
SHF-202ENST00000458022 FMN2Q9NZ56 1722 aa24.51■■□□□ 1.51
SHF-202ENST00000458022 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
SHF-202ENST00000458022 RGL3Q3MIN7 710 aa24.49■■□□□ 1.51
SHF-202ENST00000458022 SIRT1Q96EB6 747 aa24.49■■□□□ 1.51
SHF-202ENST00000458022 PIK3C2GO75747 1445 aa24.49■■□□□ 1.51
SHF-202ENST00000458022 YTHDC2Q9H6S0 1430 aaKnown RBP24.49■■□□□ 1.51
SHF-202ENST00000458022 KNDC1Q76NI1 1749 aa24.49■■□□□ 1.51
SHF-202ENST00000458022 PSME1Q06323 249 aa24.48■■□□□ 1.51
SHF-202ENST00000458022 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
SHF-202ENST00000458022 LRP5O75197 1615 aa24.47■■□□□ 1.51
SHF-202ENST00000458022 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
SHF-202ENST00000458022 PHF8Q9UPP1 1060 aa24.47■■□□□ 1.51
SHF-202ENST00000458022 SBNO1A3KN83 1393 aa24.46■■□□□ 1.51
SHF-202ENST00000458022 BRWD3Q6RI45 1802 aa24.46■■□□□ 1.51
SHF-202ENST00000458022 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
SHF-202ENST00000458022 ARHGEF10O15013 1369 aa24.43■■□□□ 1.5
SHF-202ENST00000458022 NRXN1Q9ULB1 1477 aa24.43■■□□□ 1.5
SHF-202ENST00000458022 NWD2Q9ULI1 1742 aa24.42■■□□□ 1.5
SHF-202ENST00000458022 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
SHF-202ENST00000458022 BAG6P46379 1132 aa24.41■■□□□ 1.5
SHF-202ENST00000458022 PLCH1Q4KWH8 1693 aa24.4■■□□□ 1.5
SHF-202ENST00000458022 FAM83GA6ND36 823 aa24.4■■□□□ 1.5
SHF-202ENST00000458022 C14orf93Q9H972 538 aaKnown RBP24.39■■□□□ 1.49
SHF-202ENST00000458022 PSDA5PKW4 1024 aaPredicted RBP24.38■■□□□ 1.49
SHF-202ENST00000458022 PLEKHG5O94827 1062 aa24.38■■□□□ 1.49
SHF-202ENST00000458022 HRCP23327 699 aa24.38■■□□□ 1.49
SHF-202ENST00000458022 LMOD2Q6P5Q4 547 aa24.38■■□□□ 1.49
SHF-202ENST00000458022 ABCA3Q99758 1704 aa24.35■■□□□ 1.49
SHF-202ENST00000458022 DHX57Q6P158 1386 aaKnown RBP24.35■■□□□ 1.49
SHF-202ENST00000458022 A0A0G2JS52 829 aa24.35■■□□□ 1.49
SHF-202ENST00000458022 MYT1Q01538 1121 aa24.35■■□□□ 1.49
SHF-202ENST00000458022 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
SHF-202ENST00000458022 MPHOSPH9Q99550 1183 aa24.35■■□□□ 1.49
SHF-202ENST00000458022 ANKARQ7Z5J8 1434 aa24.34■■□□□ 1.49
SHF-202ENST00000458022 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
SHF-202ENST00000458022 CFAP70Q5T0N1 1121 aa24.32■■□□□ 1.48
SHF-202ENST00000458022 BTG4Q9NY30 223 aa24.32■■□□□ 1.48
SHF-202ENST00000458022 PMFBP1Q8TBY8 1022 aa24.31■■□□□ 1.48
SHF-202ENST00000458022 EN1Q05925 392 aaPredicted RBP24.3■■□□□ 1.48
SHF-202ENST00000458022 SAFB2Q14151 953 aaKnown RBP eCLIP24.3■■□□□ 1.48
SHF-202ENST00000458022 NRAPQ86VF7 1730 aa24.3■■□□□ 1.48
SHF-202ENST00000458022 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
SHF-202ENST00000458022 DISP2A7MBM2 1401 aa24.28■■□□□ 1.48
SHF-202ENST00000458022 DLC1Q96QB1 1528 aa24.28■■□□□ 1.48
SHF-202ENST00000458022 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
SHF-202ENST00000458022 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
SHF-202ENST00000458022 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
SHF-202ENST00000458022 POGKQ9P215 609 aa24.25■■□□□ 1.47
SHF-202ENST00000458022 GPRASP1Q5JY77 1395 aa24.25■■□□□ 1.47
SHF-202ENST00000458022 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
SHF-202ENST00000458022 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
SHF-202ENST00000458022 FAM182BQ5T319 152 aa24.24■■□□□ 1.47
SHF-202ENST00000458022 TRPM3Q9HCF6 1732 aaPredicted RBP24.24■■□□□ 1.47
SHF-202ENST00000458022 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms