RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 IDI1Q13907 227 aa7.26□□□□□ -1.25
GTF3C3-208ENST00000455546 BMP2KQ9NSY1 1161 aaPredicted RBP7.26□□□□□ -1.25
GTF3C3-208ENST00000455546 ZC3H13Q5T200 1668 aaKnown RBP7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 ANKRD30AQ9BXX3 1397 aa7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 UBR1Q8IWV7 1749 aa7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 MKRN3Q13064 507 aaKnown RBP7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 IQGAP1P46940 1657 aa7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 VWDEQ8N2E2 1590 aa7.25□□□□□ -1.25
GTF3C3-208ENST00000455546 MED14O60244 1454 aa7.24□□□□□ -1.25
GTF3C3-208ENST00000455546 TIE1P35590 1138 aa7.24□□□□□ -1.25
GTF3C3-208ENST00000455546 ITGAEP38570 1179 aa7.24□□□□□ -1.25
GTF3C3-208ENST00000455546 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
GTF3C3-208ENST00000455546 ERBINQ96RT1 1412 aa7.24□□□□□ -1.25
GTF3C3-208ENST00000455546 DEPDC5O75140 1603 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 KANK1Q14678 1352 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 CPS1P31327 1500 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 TRIM35Q9UPQ4 493 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 EID1Q9Y6B2 187 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 PIK3C2BO00750 1634 aa7.23□□□□□ -1.25
GTF3C3-208ENST00000455546 ARHGAP31Q2M1Z3 1444 aa7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 SOCS7O14512 581 aa7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 SLC26A8Q96RN1 970 aa7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 MYO5BQ9ULV0 1848 aa7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 PRDM15P57071 1507 aaPredicted RBP7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 LRRC7Q96NW7 1537 aa7.22□□□□□ -1.25
GTF3C3-208ENST00000455546 ALKQ9UM73 1620 aa7.21□□□□□ -1.26
GTF3C3-208ENST00000455546 NUTM2DQ5VT03 806 aaPredicted RBP7.21□□□□□ -1.26
GTF3C3-208ENST00000455546 KCNV2Q8TDN2 545 aa7.21□□□□□ -1.26
GTF3C3-208ENST00000455546 XIRP1Q702N8 1843 aaKnown RBP7.21□□□□□ -1.26
GTF3C3-208ENST00000455546 SCAF11Q99590 1463 aaKnown RBP7.21□□□□□ -1.26
GTF3C3-208ENST00000455546 TMEM2Q9UHN6 1383 aa7.2□□□□□ -1.26
GTF3C3-208ENST00000455546 ARHGAP23Q9P227 1491 aa7.2□□□□□ -1.26
GTF3C3-208ENST00000455546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.2□□□□□ -1.263e-7■■■□□ 15.2
GTF3C3-208ENST00000455546 ANKRD50Q9ULJ7 1429 aa7.19□□□□□ -1.26
GTF3C3-208ENST00000455546 SLIT1O75093 1534 aa7.19□□□□□ -1.26
GTF3C3-208ENST00000455546 ATN1P54259 1190 aaPredicted RBP7.19□□□□□ -1.26
GTF3C3-208ENST00000455546 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
GTF3C3-208ENST00000455546 SYNMO15061 1565 aa7.19□□□□□ -1.26
GTF3C3-208ENST00000455546 NOS1P29475 1434 aa7.18□□□□□ -1.26
GTF3C3-208ENST00000455546 KCNA6P17658 529 aa7.18□□□□□ -1.26
GTF3C3-208ENST00000455546 DPY19L2Q6NUT2 758 aa7.18□□□□□ -1.26
GTF3C3-208ENST00000455546 SLC52A1Q9NWF4 448 aa7.18□□□□□ -1.26
GTF3C3-208ENST00000455546 ADGRL2O95490 1459 aa7.17□□□□□ -1.26
GTF3C3-208ENST00000455546 EFCAB6Q5THR3 1501 aa7.17□□□□□ -1.26
GTF3C3-208ENST00000455546 LMTK2Q8IWU2 1503 aa7.17□□□□□ -1.26
GTF3C3-208ENST00000455546 TET3O43151 1660 aa7.16□□□□□ -1.26
GTF3C3-208ENST00000455546 PPP1R15AO75807 674 aaPredicted RBP7.16□□□□□ -1.26
GTF3C3-208ENST00000455546 LARP6Q9BRS8 491 aaKnown RBP7.16□□□□□ -1.26
GTF3C3-208ENST00000455546 TMEM94Q12767 1356 aa7.16□□□□□ -1.26
GTF3C3-208ENST00000455546 MED1Q15648 1581 aaPredicted RBP7.16□□□□□ -1.26
GTF3C3-208ENST00000455546 NUP155O75694 1391 aa7.15□□□□□ -1.26
GTF3C3-208ENST00000455546 E9PCH4 1651 aa7.15□□□□□ -1.27
GTF3C3-208ENST00000455546 GCC2Q8IWJ2 1684 aa7.15□□□□□ -1.27
GTF3C3-208ENST00000455546 CHD2O14647 1828 aaKnown RBP7.14□□□□□ -1.27
GTF3C3-208ENST00000455546 ATMINO43313 823 aaPredicted RBP7.14□□□□□ -1.27
GTF3C3-208ENST00000455546 KDM5AP29375 1690 aaKnown RBP7.14□□□□□ -1.27
GTF3C3-208ENST00000455546 HDGFP51858 240 aaKnown RBP7.14□□□□□ -1.27
GTF3C3-208ENST00000455546 RIMS2Q9UQ26 1411 aa7.14□□□□□ -1.27
GTF3C3-208ENST00000455546 TMEM131LA2VDJ0 1609 aa7.13□□□□□ -1.27
GTF3C3-208ENST00000455546 ADGRB3O60242 1522 aa7.13□□□□□ -1.27
GTF3C3-208ENST00000455546 GABBR2O75899 941 aa7.13□□□□□ -1.27
GTF3C3-208ENST00000455546 RGS17Q9UGC6 210 aaPredicted RBP7.13□□□□□ -1.27
GTF3C3-208ENST00000455546 UNC13BO14795 1591 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 RPRD2Q5VT52 1461 aaKnown RBP7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 ZFYVE9O95405 1425 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 ROCK1Q13464 1354 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 E2F4Q16254 413 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 POTEHQ6S545 545 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 C14orf37Q86TY3 774 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 PDCD7Q8N8D1 485 aaKnown RBP7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 CRISPLD2Q9H0B8 497 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 TBX22Q9Y458 520 aa7.12□□□□□ -1.27
GTF3C3-208ENST00000455546 FAM135BQ49AJ0 1406 aa7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 PLEKHG1Q9ULL1 1385 aa7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 PDE4AP27815 886 aa7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 ASTLQ6HA08 431 aaPredicted RBP7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 AMOTL2Q9Y2J4 779 aa7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 ROBO1Q9Y6N7 1651 aa7.11□□□□□ -1.27
GTF3C3-208ENST00000455546 MSH6P52701 1360 aa7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 IQGAP3Q86VI3 1631 aa7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 MICALL2Q8IY33 904 aa7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 TRIM52Q96A61 297 aa7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 DDX27Q96GQ7 796 aaKnown RBP7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 ADAMTS13Q76LX8 1427 aa7.1□□□□□ -1.27
GTF3C3-208ENST00000455546 CLCN6P51797 869 aa7.09□□□□□ -1.27
GTF3C3-208ENST00000455546 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.27
GTF3C3-208ENST00000455546 MFSD10Q14728 455 aa7.09□□□□□ -1.27
GTF3C3-208ENST00000455546 POTEAQ6S8J7 498 aa7.09□□□□□ -1.27
GTF3C3-208ENST00000455546 PELP1Q8IZL8 1130 aaKnown RBP7.09□□□□□ -1.27
GTF3C3-208ENST00000455546 ATF3P18847 181 aa7.08□□□□□ -1.28
GTF3C3-208ENST00000455546 C19orf44Q9H6X5 657 aa7.08□□□□□ -1.28
GTF3C3-208ENST00000455546 PTPRUQ92729 1446 aa7.08□□□□□ -1.28
GTF3C3-208ENST00000455546 NWD1Q149M9 1564 aa7.08□□□□□ -1.28
GTF3C3-208ENST00000455546 PHLPP1O60346 1717 aa7.07□□□□□ -1.28
GTF3C3-208ENST00000455546 SPHKAPQ2M3C7 1700 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms