RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SOS2Q07890 1332 aaPredicted RBP27.46■■□□□ 1.99
UBE2D4-208ENST00000454350 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
UBE2D4-208ENST00000454350 NUTM2BA6NNL0 878 aaPredicted RBP27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 NUTM2EB1AL46 878 aaPredicted RBP27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 MEX3CQ5U5Q3 659 aaKnown RBP27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 WAPLQ7Z5K2 1190 aa27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 NUTM2AQ8IVF1 878 aaPredicted RBP27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 STK26Q9P289 416 aa27.45■■□□□ 1.98
UBE2D4-208ENST00000454350 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
UBE2D4-208ENST00000454350 C14orf93Q9H972 538 aaKnown RBP27.43■■□□□ 1.98
UBE2D4-208ENST00000454350 FMN2Q9NZ56 1722 aa27.43■■□□□ 1.98
UBE2D4-208ENST00000454350 ZNF772Q68DY9 489 aaPredicted RBP27.41■■□□□ 1.98
UBE2D4-208ENST00000454350 COL22A1Q8NFW1 1626 aaPredicted RBP27.4■■□□□ 1.98
UBE2D4-208ENST00000454350 RGPD8O14715 1765 aaPredicted RBP27.39■■□□□ 1.98
UBE2D4-208ENST00000454350 PXDNQ92626 1479 aa27.38■■□□□ 1.97
UBE2D4-208ENST00000454350 CFAP70Q5T0N1 1121 aa27.37■■□□□ 1.97
UBE2D4-208ENST00000454350 SIRT1Q96EB6 747 aa27.37■■□□□ 1.97
UBE2D4-208ENST00000454350 AFF2P51816 1311 aa27.37■■□□□ 1.97
UBE2D4-208ENST00000454350 HRCP23327 699 aa27.36■■□□□ 1.97
UBE2D4-208ENST00000454350 ESCO1Q5FWF5 840 aa27.34■■□□□ 1.97
UBE2D4-208ENST00000454350 ADGRB1O14514 1584 aa27.33■■□□□ 1.97
UBE2D4-208ENST00000454350 NPHP3Q7Z494 1330 aa27.31■■□□□ 1.96
UBE2D4-208ENST00000454350 DHX57Q6P158 1386 aaKnown RBP27.3■■□□□ 1.96
UBE2D4-208ENST00000454350 CDK12Q9NYV4 1490 aaPredicted RBP27.3■■□□□ 1.96
UBE2D4-208ENST00000454350 DLC1Q96QB1 1528 aa27.3■■□□□ 1.96
UBE2D4-208ENST00000454350 KIF1AQ12756 1690 aa27.3■■□□□ 1.96
UBE2D4-208ENST00000454350 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
UBE2D4-208ENST00000454350 NUTM2FA1L443 756 aa27.29■■□□□ 1.96
UBE2D4-208ENST00000454350 C8orf37Q96NL8 207 aa27.29■■□□□ 1.96
UBE2D4-208ENST00000454350 FOXO3O43524 673 aa27.28■■□□□ 1.96
UBE2D4-208ENST00000454350 RXRBP28702 533 aa27.27■■□□□ 1.96
UBE2D4-208ENST00000454350 ADAMTS2O95450 1211 aa27.26■■□□□ 1.95
UBE2D4-208ENST00000454350 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
UBE2D4-208ENST00000454350 USP32Q8NFA0 1604 aa27.24■■□□□ 1.95
UBE2D4-208ENST00000454350 ADGRB2O60241 1585 aa27.23■■□□□ 1.95
UBE2D4-208ENST00000454350 PRAM1Q96QH2 718 aa27.23■■□□□ 1.95
UBE2D4-208ENST00000454350 NGLY1Q96IV0 654 aa27.21■■□□□ 1.95
UBE2D4-208ENST00000454350 QTRT2Q9H974 415 aaKnown RBP27.21■■□□□ 1.95
UBE2D4-208ENST00000454350 DCAF11Q8TEB1 546 aa27.2■■□□□ 1.94
UBE2D4-208ENST00000454350 RGS12O14924 1447 aa27.19■■□□□ 1.94
UBE2D4-208ENST00000454350 FNBP4Q8N3X1 1017 aaPredicted RBP27.19■■□□□ 1.94
UBE2D4-208ENST00000454350 SAFB2Q14151 953 aaKnown RBP eCLIP27.18■■□□□ 1.94
UBE2D4-208ENST00000454350 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
UBE2D4-208ENST00000454350 RBM6P78332 1123 aaKnown RBP27.17■■□□□ 1.94
UBE2D4-208ENST00000454350 UPF1Q92900 1129 aaKnown RBP eCLIP27.17■■□□□ 1.94
UBE2D4-208ENST00000454350 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
UBE2D4-208ENST00000454350 STAC3Q96MF2 364 aa27.16■■□□□ 1.94
UBE2D4-208ENST00000454350 ARHGEF28Q8N1W1 1705 aaKnown RBP27.16■■□□□ 1.94
UBE2D4-208ENST00000454350 PHF8Q9UPP1 1060 aa27.14■■□□□ 1.94
UBE2D4-208ENST00000454350 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
UBE2D4-208ENST00000454350 KRT28Q7Z3Y7 464 aa27.13■■□□□ 1.93
UBE2D4-208ENST00000454350 USP21Q9UK80 565 aa27.13■■□□□ 1.93
UBE2D4-208ENST00000454350 ATRNO75882 1429 aa27.13■■□□□ 1.93
UBE2D4-208ENST00000454350 ANKARQ7Z5J8 1434 aa27.13■■□□□ 1.93
UBE2D4-208ENST00000454350 BCL9LQ86UU0 1499 aa27.13■■□□□ 1.93
UBE2D4-208ENST00000454350 POGKQ9P215 609 aa27.12■■□□□ 1.93
UBE2D4-208ENST00000454350 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
UBE2D4-208ENST00000454350 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.11■■□□□ 1.93
UBE2D4-208ENST00000454350 TRPM3Q9HCF6 1732 aaPredicted RBP27.1■■□□□ 1.93
UBE2D4-208ENST00000454350 KIAA1210Q9ULL0 1709 aa27.1■■□□□ 1.93
UBE2D4-208ENST00000454350 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
UBE2D4-208ENST00000454350 TRPC5Q9UL62 973 aaPredicted RBP27.07■■□□□ 1.92
UBE2D4-208ENST00000454350 PRR36Q9H6K5 1346 aa27.07■■□□□ 1.92
UBE2D4-208ENST00000454350 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
UBE2D4-208ENST00000454350 HIRIP3Q9BW71 556 aaPredicted RBP27.06■■□□□ 1.92
UBE2D4-208ENST00000454350 MINK1Q8N4C8 1332 aaPredicted RBP27.06■■□□□ 1.92
UBE2D4-208ENST00000454350 SBNO1A3KN83 1393 aa27.06■■□□□ 1.92
UBE2D4-208ENST00000454350 SLIT2O94813 1529 aa27.05■■□□□ 1.92
UBE2D4-208ENST00000454350 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
UBE2D4-208ENST00000454350 PMFBP1Q8TBY8 1022 aa27.03■■□□□ 1.92
UBE2D4-208ENST00000454350 PSME1Q06323 249 aa27.02■■□□□ 1.92
UBE2D4-208ENST00000454350 WASLO00401 505 aaPredicted RBP27.01■■□□□ 1.91
UBE2D4-208ENST00000454350 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
UBE2D4-208ENST00000454350 ITSN1Q15811 1721 aa26.99■■□□□ 1.91
UBE2D4-208ENST00000454350 CABLES1Q8TDN4 633 aa26.99■■□□□ 1.91
UBE2D4-208ENST00000454350 GLI3P10071 1580 aa26.99■■□□□ 1.91
UBE2D4-208ENST00000454350 NWD2Q9ULI1 1742 aa26.99■■□□□ 1.91
UBE2D4-208ENST00000454350 CRYBG1Q9Y4K1 1723 aa26.99■■□□□ 1.91
UBE2D4-208ENST00000454350 EIF3AQ14152 1382 aaKnown RBP26.98■■□□□ 1.91
UBE2D4-208ENST00000454350 EP400Q96L91 3159 aa26.97■■□□□ 1.91
UBE2D4-208ENST00000454350 ATP7BP35670 1465 aa26.97■■□□□ 1.91
UBE2D4-208ENST00000454350 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
UBE2D4-208ENST00000454350 UNC5CLQ8IV45 518 aa26.95■■□□□ 1.9
UBE2D4-208ENST00000454350 GJD4Q96KN9 370 aaPredicted RBP26.95■■□□□ 1.9
UBE2D4-208ENST00000454350 TOPAZ1Q8N9V7 1692 aa26.95■■□□□ 1.9
UBE2D4-208ENST00000454350 BRWD3Q6RI45 1802 aa26.94■■□□□ 1.9
UBE2D4-208ENST00000454350 NBPF1Q3BBV0 1214 aa26.93■■□□□ 1.9
UBE2D4-208ENST00000454350 RALGAPBQ86X10 1494 aa26.93■■□□□ 1.9
UBE2D4-208ENST00000454350 NRAPQ86VF7 1730 aa26.91■■□□□ 1.9
UBE2D4-208ENST00000454350 ATAD2Q6PL18 1390 aa26.9■■□□□ 1.9
UBE2D4-208ENST00000454350 LMOD2Q6P5Q4 547 aa26.9■■□□□ 1.9
UBE2D4-208ENST00000454350 GPRASP1Q5JY77 1395 aa26.89■■□□□ 1.9
UBE2D4-208ENST00000454350 NUDT16Q96DE0 195 aaKnown RBP26.88■■□□□ 1.89
UBE2D4-208ENST00000454350 PLEKHG5O94827 1062 aa26.87■■□□□ 1.89
UBE2D4-208ENST00000454350 FAM83GA6ND36 823 aa26.86■■□□□ 1.89
UBE2D4-208ENST00000454350 HAP1P54257 671 aaPredicted RBP26.86■■□□□ 1.89
UBE2D4-208ENST00000454350 CDK19Q9BWU1 502 aa26.86■■□□□ 1.89
UBE2D4-208ENST00000454350 COL14A1Q05707 1796 aaKnown RBP26.84■■□□□ 1.89
UBE2D4-208ENST00000454350 NGDNQ8NEJ9 315 aaKnown RBP26.84■■□□□ 1.89
UBE2D4-208ENST00000454350 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms