RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 METP08581 1390 aa17.62■□□□□ 0.41
TSFM-204ENST00000454289 ABCC11Q96J66 1382 aa17.61■□□□□ 0.41
TSFM-204ENST00000454289 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
TSFM-204ENST00000454289 SUPT16HQ9Y5B9 1047 aaKnown RBP17.61■□□□□ 0.41
TSFM-204ENST00000454289 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
TSFM-204ENST00000454289 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
TSFM-204ENST00000454289 SRPK2P78362 688 aaKnown RBP17.59■□□□□ 0.41
TSFM-204ENST00000454289 ANKRD36BQ8N2N9 1353 aa17.58■□□□□ 0.41
TSFM-204ENST00000454289 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.41
TSFM-204ENST00000454289 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
TSFM-204ENST00000454289 LTKP29376 864 aa17.58■□□□□ 0.4
TSFM-204ENST00000454289 WAPLQ7Z5K2 1190 aa17.58■□□□□ 0.4
TSFM-204ENST00000454289 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
TSFM-204ENST00000454289 ATAD2Q6PL18 1390 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 NINLQ9Y2I6 1382 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 SLIT1O75093 1534 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 RIMS1Q86UR5 1692 aaKnown RBP17.56■□□□□ 0.4
TSFM-204ENST00000454289 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 INSRP06213 1382 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 BCANQ96GW7 911 aa17.56■□□□□ 0.4
TSFM-204ENST00000454289 CDK19Q9BWU1 502 aa17.55■□□□□ 0.4
TSFM-204ENST00000454289 TECPR2O15040 1411 aa17.55■□□□□ 0.4
TSFM-204ENST00000454289 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
TSFM-204ENST00000454289 CPS1P31327 1500 aa17.54■□□□□ 0.4
TSFM-204ENST00000454289 TXNDC2Q86VQ3 553 aa17.54■□□□□ 0.4
TSFM-204ENST00000454289 FKBP8Q14318 412 aa17.53■□□□□ 0.4
TSFM-204ENST00000454289 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
TSFM-204ENST00000454289 FAM135BQ49AJ0 1406 aa17.52■□□□□ 0.4
TSFM-204ENST00000454289 CD163L1Q9NR16 1453 aa17.52■□□□□ 0.4
TSFM-204ENST00000454289 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
TSFM-204ENST00000454289 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.39
TSFM-204ENST00000454289 MED14O60244 1454 aa17.52■□□□□ 0.39
TSFM-204ENST00000454289 NEFLP07196 543 aa17.51■□□□□ 0.39
TSFM-204ENST00000454289 SIRT1Q96EB6 747 aa17.51■□□□□ 0.39
TSFM-204ENST00000454289 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
TSFM-204ENST00000454289 ADAMTSL3P82987 1691 aa17.51■□□□□ 0.39
TSFM-204ENST00000454289 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
TSFM-204ENST00000454289 ADAMTS8Q9UP79 889 aa17.5■□□□□ 0.39
TSFM-204ENST00000454289 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
TSFM-204ENST00000454289 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
TSFM-204ENST00000454289 NSD2O96028 1365 aa17.48■□□□□ 0.39
TSFM-204ENST00000454289 ROBO2Q9HCK4 1378 aa17.48■□□□□ 0.39
TSFM-204ENST00000454289 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
TSFM-204ENST00000454289 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
TSFM-204ENST00000454289 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
TSFM-204ENST00000454289 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
TSFM-204ENST00000454289 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
TSFM-204ENST00000454289 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
TSFM-204ENST00000454289 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
TSFM-204ENST00000454289 TNNT2P45379 298 aaPredicted RBP17.46■□□□□ 0.39
TSFM-204ENST00000454289 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
TSFM-204ENST00000454289 POLR3AO14802 1390 aaPredicted RBP17.45■□□□□ 0.38
TSFM-204ENST00000454289 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
TSFM-204ENST00000454289 ATP7BP35670 1465 aa17.44■□□□□ 0.38
TSFM-204ENST00000454289 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.44■□□□□ 0.38
TSFM-204ENST00000454289 ANKRD26Q9UPS8 1709 aa17.44■□□□□ 0.38
TSFM-204ENST00000454289 TBX22Q9Y458 520 aa17.43■□□□□ 0.38
TSFM-204ENST00000454289 DIP2AQ14689 1571 aa17.43■□□□□ 0.38
TSFM-204ENST00000454289 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
TSFM-204ENST00000454289 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
TSFM-204ENST00000454289 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
TSFM-204ENST00000454289 GGNBP2Q9H3C7 697 aa17.41■□□□□ 0.38
TSFM-204ENST00000454289 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
TSFM-204ENST00000454289 FYB1O15117 783 aa17.4■□□□□ 0.38
TSFM-204ENST00000454289 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
TSFM-204ENST00000454289 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
TSFM-204ENST00000454289 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
TSFM-204ENST00000454289 MTHFSP49914 203 aa17.39■□□□□ 0.37
TSFM-204ENST00000454289 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
TSFM-204ENST00000454289 AMOTL2Q9Y2J4 779 aa17.39■□□□□ 0.37
TSFM-204ENST00000454289 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
TSFM-204ENST00000454289 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
TSFM-204ENST00000454289 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
TSFM-204ENST00000454289 NCKAP5LQ9HCH0 1330 aa17.38■□□□□ 0.37
TSFM-204ENST00000454289 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
TSFM-204ENST00000454289 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
TSFM-204ENST00000454289 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
TSFM-204ENST00000454289 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
TSFM-204ENST00000454289 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
TSFM-204ENST00000454289 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
TSFM-204ENST00000454289 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
TSFM-204ENST00000454289 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
TSFM-204ENST00000454289 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
TSFM-204ENST00000454289 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
TSFM-204ENST00000454289 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
TSFM-204ENST00000454289 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
TSFM-204ENST00000454289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSFM-204ENST00000454289 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
TSFM-204ENST00000454289 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
TSFM-204ENST00000454289 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
TSFM-204ENST00000454289 APAF1O14727 1248 aa17.32■□□□□ 0.36
TSFM-204ENST00000454289 COL3A1P02461 1466 aaPredicted RBP17.31■□□□□ 0.36
TSFM-204ENST00000454289 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
TSFM-204ENST00000454289 KCNA6P17658 529 aa17.29■□□□□ 0.36
TSFM-204ENST00000454289 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
TSFM-204ENST00000454289 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
TSFM-204ENST00000454289 NUTM2FA1L443 756 aa17.29■□□□□ 0.36
TSFM-204ENST00000454289 NME9Q86XW9 330 aa17.29■□□□□ 0.36
TSFM-204ENST00000454289 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms