RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NEO1Q92859 1461 aa10.49□□□□□ -0.73
BRCC3-208ENST00000453705 LMTK2Q8IWU2 1503 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 TONSLQ96HA7 1378 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 SETQ01105 290 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-208ENST00000453705 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 POM121Q96HA1 1249 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-208ENST00000453705 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-208ENST00000453705 CEP152O94986 1710 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-208ENST00000453705 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
BRCC3-208ENST00000453705 EFCAB2Q5VUJ9 269 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 PPME1Q9Y570 386 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 ANP32EQ9BTT0 268 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
BRCC3-208ENST00000453705 FANCAO15360 1455 aa10.47□□□□□ -0.73
BRCC3-208ENST00000453705 CHRM1P11229 460 aaPredicted RBP10.46□□□□□ -0.73
BRCC3-208ENST00000453705 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
BRCC3-208ENST00000453705 KIAA1522Q9P206 1035 aaPredicted RBP10.46□□□□□ -0.73
BRCC3-208ENST00000453705 SPHKAPQ2M3C7 1700 aa10.46□□□□□ -0.74
BRCC3-208ENST00000453705 TSPY4P0CV99 314 aa10.46□□□□□ -0.74
BRCC3-208ENST00000453705 TSPY10P0CW01 314 aa10.46□□□□□ -0.74
BRCC3-208ENST00000453705 EVI5LQ96CN4 794 aa10.46□□□□□ -0.74
BRCC3-208ENST00000453705 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.74
BRCC3-208ENST00000453705 PPP1R1BQ9UD71 204 aaPredicted RBP10.46□□□□□ -0.74
BRCC3-208ENST00000453705 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 RICTORQ6R327 1708 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 ANKRD13AQ8IZ07 590 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-208ENST00000453705 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 MLH3Q9UHC1 1453 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 ANKRD62A6NC57 917 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 E9PCH4 1651 aa10.45□□□□□ -0.74
BRCC3-208ENST00000453705 HECW2Q9P2P5 1572 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 SIN3AQ96ST3 1273 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 SUGT1Q9Y2Z0 365 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 REREQ9P2R6 1566 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 TRPM2O94759 1503 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 ZMYM4Q5VZL5 1548 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 ZNF518AQ6AHZ1 1483 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 TRAPPC8Q9Y2L5 1435 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 KIAA1210Q9ULL0 1709 aa10.44□□□□□ -0.74
BRCC3-208ENST00000453705 ZC3H13Q5T200 1668 aaKnown RBP10.43□□□□□ -0.74
BRCC3-208ENST00000453705 RALGAPBQ86X10 1494 aa10.43□□□□□ -0.74
BRCC3-208ENST00000453705 MICAL1Q8TDZ2 1067 aa10.43□□□□□ -0.74
BRCC3-208ENST00000453705 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
BRCC3-208ENST00000453705 POLA2Q14181 598 aa10.42□□□□□ -0.74
BRCC3-208ENST00000453705 TRPM1Q7Z4N2 1603 aa10.42□□□□□ -0.74
BRCC3-208ENST00000453705 ADGRL1O94910 1474 aa10.42□□□□□ -0.74
BRCC3-208ENST00000453705 A6NJR5 290 aa10.42□□□□□ -0.74
BRCC3-208ENST00000453705 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 PTPRTO14522 1441 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 TPD52L2O43399 206 aaKnown RBP10.41□□□□□ -0.74
BRCC3-208ENST00000453705 PEX14O75381 377 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 APBB1IPQ7Z5R6 666 aaPredicted RBP10.41□□□□□ -0.74
BRCC3-208ENST00000453705 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
BRCC3-208ENST00000453705 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
BRCC3-208ENST00000453705 CHMP4BQ9H444 224 aaKnown RBP10.41□□□□□ -0.74
BRCC3-208ENST00000453705 DIP2BQ9P265 1576 aa10.4□□□□□ -0.74
BRCC3-208ENST00000453705 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
BRCC3-208ENST00000453705 AMOTL2Q9Y2J4 779 aa10.4□□□□□ -0.74
BRCC3-208ENST00000453705 FLIIQ13045 1269 aa10.4□□□□□ -0.75
BRCC3-208ENST00000453705 SPTY2D1Q68D10 685 aaPredicted RBP10.4□□□□□ -0.75
BRCC3-208ENST00000453705 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
BRCC3-208ENST00000453705 RAB11FIP3O75154 756 aa10.39□□□□□ -0.75
BRCC3-208ENST00000453705 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCC3-208ENST00000453705 PLA2R1Q13018 1463 aa10.39□□□□□ -0.75
BRCC3-208ENST00000453705 EFCAB6Q5THR3 1501 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 NUP155O75694 1391 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 ABCA6Q8N139 1617 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 CD109Q6YHK3 1445 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 TRIM52Q96A61 297 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
BRCC3-208ENST00000453705 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
BRCC3-208ENST00000453705 DHX29Q7Z478 1369 aaKnown RBP10.37□□□□□ -0.75
BRCC3-208ENST00000453705 HIRIP3Q9BW71 556 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-208ENST00000453705 MCCP23508 829 aa10.36□□□□□ -0.75
BRCC3-208ENST00000453705 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
BRCC3-208ENST00000453705 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
BRCC3-208ENST00000453705 GPRASP1Q5JY77 1395 aa10.36□□□□□ -0.75
BRCC3-208ENST00000453705 KIF13AQ9H1H9 1805 aa10.35□□□□□ -0.75
BRCC3-208ENST00000453705 SCAPERQ9BY12 1400 aa10.35□□□□□ -0.75
BRCC3-208ENST00000453705 KIF1BO60333 1816 aa10.35□□□□□ -0.75
BRCC3-208ENST00000453705 PDE4DQ08499 809 aa10.35□□□□□ -0.75
BRCC3-208ENST00000453705 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
BRCC3-208ENST00000453705 MADDQ8WXG6 1647 aa10.34□□□□□ -0.75
BRCC3-208ENST00000453705 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
BRCC3-208ENST00000453705 IQGAP1P46940 1657 aa10.34□□□□□ -0.75
BRCC3-208ENST00000453705 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-208ENST00000453705 PROSER2Q86WR7 435 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-208ENST00000453705 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
BRCC3-208ENST00000453705 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
BRCC3-208ENST00000453705 FBXO41Q8TF61 875 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms