RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 NPC1L1Q9UHC9 1359 aa33.35■■■□□ 2.93
MCF2L-219ENST00000453297 MINK1Q8N4C8 1332 aaPredicted RBP33.34■■■□□ 2.93
MCF2L-219ENST00000453297 NLRP13Q86W25 1043 aa33.34■■■□□ 2.93
MCF2L-219ENST00000453297 CEP170BQ9Y4F5 1589 aaPredicted RBP33.33■■■□□ 2.93
MCF2L-219ENST00000453297 CARD14Q9BXL6 1004 aa33.33■■■□□ 2.93
MCF2L-219ENST00000453297 HNRNPUQ00839 825 aaKnown RBP eCLIP33.32■■■□□ 2.93
MCF2L-219ENST00000453297 SLC12A5Q9H2X9 1139 aa33.32■■■□□ 2.93
MCF2L-219ENST00000453297 SCAF1Q9H7N4 1312 aaKnown RBP33.32■■■□□ 2.93
MCF2L-219ENST00000453297 CABP2Q9NPB3 220 aa33.32■■■□□ 2.92
MCF2L-219ENST00000453297 PNISRQ8TF01 805 aaKnown RBP33.3■■■□□ 2.92
MCF2L-219ENST00000453297 TECPR2O15040 1411 aa33.29■■■□□ 2.92
MCF2L-219ENST00000453297 WAPLQ7Z5K2 1190 aa33.29■■■□□ 2.92
MCF2L-219ENST00000453297 MED14O60244 1454 aa33.29■■■□□ 2.92
MCF2L-219ENST00000453297 PLEKHH1Q9ULM0 1364 aa33.29■■■□□ 2.92
MCF2L-219ENST00000453297 SIRT1Q96EB6 747 aa33.27■■■□□ 2.92
MCF2L-219ENST00000453297 CPS1P31327 1500 aa33.26■■■□□ 2.92
MCF2L-219ENST00000453297 SRPK2P78362 688 aaKnown RBP33.26■■■□□ 2.92
MCF2L-219ENST00000453297 FAM135BQ49AJ0 1406 aa33.25■■■□□ 2.91
MCF2L-219ENST00000453297 ZNF142P52746 1687 aaPredicted RBP33.24■■■□□ 2.91
MCF2L-219ENST00000453297 GTF3C3Q9Y5Q9 886 aa33.24■■■□□ 2.91
MCF2L-219ENST00000453297 ATAD2Q6PL18 1390 aa33.23■■■□□ 2.91
MCF2L-219ENST00000453297 NINLQ9Y2I6 1382 aa33.22■■■□□ 2.91
MCF2L-219ENST00000453297 CDK19Q9BWU1 502 aa33.22■■■□□ 2.91
MCF2L-219ENST00000453297 NSD3Q9BZ95 1437 aa33.22■■■□□ 2.91
MCF2L-219ENST00000453297 SETD1BQ9UPS6 1966 aaKnown RBP33.21■■■□□ 2.91
MCF2L-219ENST00000453297 ANKRD36BQ8N2N9 1353 aa33.21■■■□□ 2.91
MCF2L-219ENST00000453297 USP32Q8NFA0 1604 aa33.2■■■□□ 2.9
MCF2L-219ENST00000453297 SLC26A8Q96RN1 970 aa33.19■■■□□ 2.9
MCF2L-219ENST00000453297 PPP2R1AP30153 589 aa33.18■■■□□ 2.9
MCF2L-219ENST00000453297 TBX22Q9Y458 520 aa33.17■■■□□ 2.9
MCF2L-219ENST00000453297 DIP2AQ14689 1571 aa33.16■■■□□ 2.9
MCF2L-219ENST00000453297 PTPRUQ92729 1446 aa33.14■■■□□ 2.9
MCF2L-219ENST00000453297 ROBO2Q9HCK4 1378 aa33.14■■■□□ 2.9
MCF2L-219ENST00000453297 A0A1W2PP64 1363 aa33.1■■■□□ 2.89
MCF2L-219ENST00000453297 WASLO00401 505 aaPredicted RBP33.09■■■□□ 2.89
MCF2L-219ENST00000453297 ZBED9Q6R2W3 1325 aa33.09■■■□□ 2.89
MCF2L-219ENST00000453297 CD163L1Q9NR16 1453 aa33.08■■■□□ 2.89
MCF2L-219ENST00000453297 CGNL1Q0VF96 1302 aa33.07■■■□□ 2.88
MCF2L-219ENST00000453297 TERF2IPQ9NYB0 399 aa33.07■■■□□ 2.88
MCF2L-219ENST00000453297 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.05■■■□□ 2.88
MCF2L-219ENST00000453297 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
MCF2L-219ENST00000453297 ANKLE2Q86XL3 938 aa33.05■■■□□ 2.88
MCF2L-219ENST00000453297 CABP1Q9NZU7 370 aa33.04■■■□□ 2.88
MCF2L-219ENST00000453297 ADGRB2O60241 1585 aa33.03■■■□□ 2.88
MCF2L-219ENST00000453297 NSD2O96028 1365 aa33.02■■■□□ 2.88
MCF2L-219ENST00000453297 MORC1Q86VD1 984 aa33.02■■■□□ 2.88
MCF2L-219ENST00000453297 XRN1Q8IZH2 1706 aaKnown RBP33■■■□□ 2.87
MCF2L-219ENST00000453297 PTCH1Q13635 1447 aa33■■■□□ 2.87
MCF2L-219ENST00000453297 HDGFL2Q7Z4V5 671 aaPredicted RBP33■■■□□ 2.87
MCF2L-219ENST00000453297 ATP7BP35670 1465 aa32.99■■■□□ 2.87
MCF2L-219ENST00000453297 INSRP06213 1382 aa32.99■■■□□ 2.87
MCF2L-219ENST00000453297 PIK3R4Q99570 1358 aa32.98■■■□□ 2.87
MCF2L-219ENST00000453297 NUDT16Q96DE0 195 aaKnown RBP32.96■■■□□ 2.87
MCF2L-219ENST00000453297 PPIP5K1Q6PFW1 1433 aa32.94■■■□□ 2.86
MCF2L-219ENST00000453297 ANKRD26Q9UPS8 1709 aa32.92■■■□□ 2.86
MCF2L-219ENST00000453297 BLMP54132 1417 aaPredicted RBP32.91■■■□□ 2.86
MCF2L-219ENST00000453297 CCDC61Q9Y6R9 512 aa32.91■■■□□ 2.86
MCF2L-219ENST00000453297 CHD2O14647 1828 aaKnown RBP32.9■■■□□ 2.86
MCF2L-219ENST00000453297 CPSF1Q10570 1443 aaKnown RBP32.89■■■□□ 2.86
MCF2L-219ENST00000453297 KIF20BQ96Q89 1820 aa32.89■■■□□ 2.86
MCF2L-219ENST00000453297 PRR36Q9H6K5 1346 aa32.89■■■□□ 2.86
MCF2L-219ENST00000453297 TNNT2P45379 298 aaPredicted RBP32.88■■■□□ 2.85
MCF2L-219ENST00000453297 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.85
MCF2L-219ENST00000453297 ADAMTS8Q9UP79 889 aa32.88■■■□□ 2.85
MCF2L-219ENST00000453297 POLR3AO14802 1390 aaPredicted RBP32.88■■■□□ 2.85
MCF2L-219ENST00000453297 CDC42BPGQ6DT37 1551 aa32.88■■■□□ 2.85
MCF2L-219ENST00000453297 FYB1O15117 783 aa32.87■■■□□ 2.85
MCF2L-219ENST00000453297 NCKAP5LQ9HCH0 1330 aa32.86■■■□□ 2.85
MCF2L-219ENST00000453297 KCNA6P17658 529 aa32.86■■■□□ 2.85
MCF2L-219ENST00000453297 SENP3-EIF4A1A0A087X0R7 540 aa32.85■■■□□ 2.85
MCF2L-219ENST00000453297 GGNBP2Q9H3C7 697 aa32.85■■■□□ 2.85
MCF2L-219ENST00000453297 TOPAZ1Q8N9V7 1692 aa32.85■■■□□ 2.85
MCF2L-219ENST00000453297 AKAP12Q02952 1782 aa32.85■■■□□ 2.85
MCF2L-219ENST00000453297 NPHP4O75161 1426 aaPredicted RBP32.84■■■□□ 2.85
MCF2L-219ENST00000453297 ITSN1Q15811 1721 aa32.84■■■□□ 2.85
MCF2L-219ENST00000453297 MON2Q7Z3U7 1717 aa32.83■■■□□ 2.85
MCF2L-219ENST00000453297 EDC4Q6P2E9 1401 aaKnown RBP32.8■■■□□ 2.84
MCF2L-219ENST00000453297 MTHFSP49914 203 aa32.78■■■□□ 2.84
MCF2L-219ENST00000453297 SHPRHQ149N8 1683 aa32.77■■■□□ 2.84
MCF2L-219ENST00000453297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.77■■■□□ 2.84
MCF2L-219ENST00000453297 ZNF692Q9BU19 519 aaPredicted RBP32.76■■■□□ 2.83
MCF2L-219ENST00000453297 PLEKHG3A1L390 1219 aa32.74■■■□□ 2.83
MCF2L-219ENST00000453297 NUTM2FA1L443 756 aa32.74■■■□□ 2.83
MCF2L-219ENST00000453297 SMG6Q86US8 1419 aaKnown RBP32.74■■■□□ 2.83
MCF2L-219ENST00000453297 CFAP53Q96M91 514 aa32.72■■■□□ 2.83
MCF2L-219ENST00000453297 NKTRP30414 1462 aaKnown RBP32.71■■■□□ 2.83
MCF2L-219ENST00000453297 RGPD8O14715 1765 aaPredicted RBP32.7■■■□□ 2.83
MCF2L-219ENST00000453297 SALL2Q9Y467 1007 aaPredicted RBP32.7■■■□□ 2.83
MCF2L-219ENST00000453297 FMN2Q9NZ56 1722 aa32.69■■■□□ 2.82
MCF2L-219ENST00000453297 ACEP12821 1306 aa32.69■■■□□ 2.82
MCF2L-219ENST00000453297 NUDCQ9Y266 331 aa32.68■■■□□ 2.82
MCF2L-219ENST00000453297 NALCNQ8IZF0 1738 aa32.68■■■□□ 2.82
MCF2L-219ENST00000453297 SUPT16HQ9Y5B9 1047 aaKnown RBP32.67■■■□□ 2.82
MCF2L-219ENST00000453297 NRKQ7Z2Y5 1582 aa32.67■■■□□ 2.82
MCF2L-219ENST00000453297 NME9Q86XW9 330 aa32.65■■■□□ 2.82
MCF2L-219ENST00000453297 ANKARQ7Z5J8 1434 aa32.65■■■□□ 2.82
MCF2L-219ENST00000453297 PDE3BQ13370 1112 aa32.64■■■□□ 2.82
MCF2L-219ENST00000453297 NWD1Q149M9 1564 aa32.64■■■□□ 2.82
MCF2L-219ENST00000453297 KDM4FA0A1W2PPD8 638 aa32.63■■■□□ 2.81
MCF2L-219ENST00000453297 CCDC146Q8IYE0 955 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms