RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.42
CHFR-205ENST00000450056 MORC1Q86VD1 984 aa17.64■□□□□ 0.42
CHFR-205ENST00000450056 TNPO1Q92973 898 aaKnown RBP17.64■□□□□ 0.42
CHFR-205ENST00000450056 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
CHFR-205ENST00000450056 CHGAP10645 457 aaKnown RBP17.64■□□□□ 0.41
CHFR-205ENST00000450056 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
CHFR-205ENST00000450056 TSR2Q969E8 191 aaKnown RBP17.62■□□□□ 0.41
CHFR-205ENST00000450056 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
CHFR-205ENST00000450056 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
CHFR-205ENST00000450056 GOLGA6L22H0YM25 854 aa17.61■□□□□ 0.41
CHFR-205ENST00000450056 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
CHFR-205ENST00000450056 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHFR-205ENST00000450056 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
CHFR-205ENST00000450056 UNC13BO14795 1591 aa17.6■□□□□ 0.41
CHFR-205ENST00000450056 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
CHFR-205ENST00000450056 DZIP1LQ8IYY4 767 aaKnown RBP17.59■□□□□ 0.41
CHFR-205ENST00000450056 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
CHFR-205ENST00000450056 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
CHFR-205ENST00000450056 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
CHFR-205ENST00000450056 FOXD4L5Q5VV16 416 aaPredicted RBP17.59■□□□□ 0.41
CHFR-205ENST00000450056 FOXD4L4Q8WXT5 416 aaPredicted RBP17.59■□□□□ 0.41
CHFR-205ENST00000450056 ZKSCAN2Q63HK3 967 aa17.58■□□□□ 0.41
CHFR-205ENST00000450056 EFCAB2Q5VUJ9 269 aa17.57■□□□□ 0.4
CHFR-205ENST00000450056 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
CHFR-205ENST00000450056 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
CHFR-205ENST00000450056 TPM2P07951 284 aa17.56■□□□□ 0.4
CHFR-205ENST00000450056 SSFA2P28290 1259 aa17.56■□□□□ 0.4
CHFR-205ENST00000450056 MPNDQ8N594 471 aa17.56■□□□□ 0.4
CHFR-205ENST00000450056 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
CHFR-205ENST00000450056 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
CHFR-205ENST00000450056 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
CHFR-205ENST00000450056 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
CHFR-205ENST00000450056 DUOX2Q9NRD8 1548 aa17.54■□□□□ 0.4
CHFR-205ENST00000450056 MCTP1Q6DN14 999 aa17.54■□□□□ 0.4
CHFR-205ENST00000450056 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
CHFR-205ENST00000450056 DNTTIP2Q5QJE6 756 aaKnown RBP17.53■□□□□ 0.4
CHFR-205ENST00000450056 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 PODXL2Q9NZ53 605 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 FAM135AQ9P2D6 1515 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 CFAP70Q5T0N1 1121 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 A2MP01023 1474 aa17.53■□□□□ 0.4
CHFR-205ENST00000450056 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.4
CHFR-205ENST00000450056 MTHFSP49914 203 aa17.52■□□□□ 0.4
CHFR-205ENST00000450056 C1orf115Q9H7X2 142 aa17.52■□□□□ 0.4
CHFR-205ENST00000450056 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.39
CHFR-205ENST00000450056 IQGAP3Q86VI3 1631 aa17.52■□□□□ 0.39
CHFR-205ENST00000450056 FANCAO15360 1455 aa17.51■□□□□ 0.39
CHFR-205ENST00000450056 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
CHFR-205ENST00000450056 ZSCAN30Q86W11 494 aa17.51■□□□□ 0.39
CHFR-205ENST00000450056 CARD14Q9BXL6 1004 aa17.51■□□□□ 0.39
CHFR-205ENST00000450056 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
CHFR-205ENST00000450056 APBB1O00213 710 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 CFAP53Q96M91 514 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 INO80Q9ULG1 1556 aaPredicted RBP17.5■□□□□ 0.39
CHFR-205ENST00000450056 RTEL1-TNFRSF6BF6WH68 1400 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 SKOR2Q2VWA4 1001 aaPredicted RBP17.5■□□□□ 0.39
CHFR-205ENST00000450056 CCDC173Q0VFZ6 552 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHFR-205ENST00000450056 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
CHFR-205ENST00000450056 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
CHFR-205ENST00000450056 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
CHFR-205ENST00000450056 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
CHFR-205ENST00000450056 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
CHFR-205ENST00000450056 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
CHFR-205ENST00000450056 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
CHFR-205ENST00000450056 ELL2O00472 640 aaPredicted RBP17.48■□□□□ 0.39
CHFR-205ENST00000450056 INSRP06213 1382 aa17.48■□□□□ 0.39
CHFR-205ENST00000450056 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
CHFR-205ENST00000450056 TRIM27P14373 513 aa17.47■□□□□ 0.39
CHFR-205ENST00000450056 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
CHFR-205ENST00000450056 UQCRHLA0A096LP55 91 aa17.46■□□□□ 0.39
CHFR-205ENST00000450056 UQCRHP07919 91 aa17.46■□□□□ 0.39
CHFR-205ENST00000450056 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
CHFR-205ENST00000450056 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.39
CHFR-205ENST00000450056 E9PCH4 1651 aa17.46■□□□□ 0.39
CHFR-205ENST00000450056 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
CHFR-205ENST00000450056 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
CHFR-205ENST00000450056 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
CHFR-205ENST00000450056 GAS2L2Q8NHY3 880 aa17.45■□□□□ 0.38
CHFR-205ENST00000450056 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
CHFR-205ENST00000450056 ADGRL1O94910 1474 aa17.44■□□□□ 0.38
CHFR-205ENST00000450056 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
CHFR-205ENST00000450056 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
CHFR-205ENST00000450056 ATP7AQ04656 1500 aa17.44■□□□□ 0.38
CHFR-205ENST00000450056 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
CHFR-205ENST00000450056 DEPDC5O75140 1603 aa17.44■□□□□ 0.38
CHFR-205ENST00000450056 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
CHFR-205ENST00000450056 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
CHFR-205ENST00000450056 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
CHFR-205ENST00000450056 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
CHFR-205ENST00000450056 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
CHFR-205ENST00000450056 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
CHFR-205ENST00000450056 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
CHFR-205ENST00000450056 PLCB2Q00722 1185 aa17.42■□□□□ 0.38
CHFR-205ENST00000450056 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
CHFR-205ENST00000450056 NUTM2DQ5VT03 806 aaPredicted RBP17.41■□□□□ 0.38
CHFR-205ENST00000450056 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
CHFR-205ENST00000450056 OFD1O75665 1012 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms