RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
AC004540.1-204ENST00000449537 GLI3P10071 1580 aa19.66■□□□□ 0.74
AC004540.1-204ENST00000449537 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
AC004540.1-204ENST00000449537 MARF1Q9Y4F3 1742 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-204ENST00000449537 R3HDM1Q15032 1099 aaKnown RBP19.65■□□□□ 0.74
AC004540.1-204ENST00000449537 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
AC004540.1-204ENST00000449537 ONECUT3O60422 494 aaPredicted RBP19.64■□□□□ 0.73
AC004540.1-204ENST00000449537 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.73
AC004540.1-204ENST00000449537 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
AC004540.1-204ENST00000449537 FOXO3O43524 673 aa19.62■□□□□ 0.73
AC004540.1-204ENST00000449537 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
AC004540.1-204ENST00000449537 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
AC004540.1-204ENST00000449537 SLIT2O94813 1529 aa19.61■□□□□ 0.73
AC004540.1-204ENST00000449537 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
AC004540.1-204ENST00000449537 CCDC9Q9Y3X0 531 aaKnown RBP19.61■□□□□ 0.73
AC004540.1-204ENST00000449537 E9PCH4 1651 aa19.61■□□□□ 0.73
AC004540.1-204ENST00000449537 VPS72Q15906 364 aa19.6■□□□□ 0.73
AC004540.1-204ENST00000449537 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
AC004540.1-204ENST00000449537 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
AC004540.1-204ENST00000449537 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
AC004540.1-204ENST00000449537 PXDNQ92626 1479 aa19.56■□□□□ 0.72
AC004540.1-204ENST00000449537 A0A0G2JS52 829 aa19.56■□□□□ 0.72
AC004540.1-204ENST00000449537 MYT1Q01538 1121 aa19.56■□□□□ 0.72
AC004540.1-204ENST00000449537 APLP2Q06481 763 aa19.56■□□□□ 0.72
AC004540.1-204ENST00000449537 IFFO2Q5TF58 517 aa19.55■□□□□ 0.72
AC004540.1-204ENST00000449537 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
AC004540.1-204ENST00000449537 IQGAP3Q86VI3 1631 aa19.54■□□□□ 0.72
AC004540.1-204ENST00000449537 FAM50AQ14320 339 aaKnown RBP19.53■□□□□ 0.72
AC004540.1-204ENST00000449537 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
AC004540.1-204ENST00000449537 NUP155O75694 1391 aa19.5■□□□□ 0.71
AC004540.1-204ENST00000449537 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
AC004540.1-204ENST00000449537 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
AC004540.1-204ENST00000449537 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
AC004540.1-204ENST00000449537 NUTM2FA1L443 756 aa19.46■□□□□ 0.71
AC004540.1-204ENST00000449537 VGFO15240 615 aaPredicted RBP19.46■□□□□ 0.71
AC004540.1-204ENST00000449537 KRT28Q7Z3Y7 464 aa19.46■□□□□ 0.71
AC004540.1-204ENST00000449537 CABLES1Q8TDN4 633 aa19.46■□□□□ 0.71
AC004540.1-204ENST00000449537 FAM182BQ5T319 152 aa19.45■□□□□ 0.7
AC004540.1-204ENST00000449537 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
AC004540.1-204ENST00000449537 USP32Q8NFA0 1604 aa19.44■□□□□ 0.7
AC004540.1-204ENST00000449537 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
AC004540.1-204ENST00000449537 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
AC004540.1-204ENST00000449537 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
AC004540.1-204ENST00000449537 CAMKK2Q96RR4 588 aa19.43■□□□□ 0.7
AC004540.1-204ENST00000449537 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
AC004540.1-204ENST00000449537 NEXMIFQ5QGS0 1516 aa19.42■□□□□ 0.7
AC004540.1-204ENST00000449537 FAM83GA6ND36 823 aa19.42■□□□□ 0.7
AC004540.1-204ENST00000449537 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
AC004540.1-204ENST00000449537 PSME1Q06323 249 aa19.41■□□□□ 0.7
AC004540.1-204ENST00000449537 NWD2Q9ULI1 1742 aa19.4■□□□□ 0.7
AC004540.1-204ENST00000449537 SPON1Q9HCB6 807 aa19.4■□□□□ 0.7
AC004540.1-204ENST00000449537 CDC42BPGQ6DT37 1551 aa19.4■□□□□ 0.7
AC004540.1-204ENST00000449537 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
AC004540.1-204ENST00000449537 NBPF14Q5TI25 921 aa19.39■□□□□ 0.69
AC004540.1-204ENST00000449537 CCDC144AA2RUR9 1427 aa19.39■□□□□ 0.69
AC004540.1-204ENST00000449537 TRIM37O94972 964 aa19.38■□□□□ 0.69
AC004540.1-204ENST00000449537 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
AC004540.1-204ENST00000449537 ZNF784Q8NCA9 323 aaPredicted RBP19.38■□□□□ 0.69
AC004540.1-204ENST00000449537 NAIPQ13075 1403 aa19.37■□□□□ 0.69
AC004540.1-204ENST00000449537 APBA3O96018 575 aa19.37■□□□□ 0.69
AC004540.1-204ENST00000449537 PLCH1Q4KWH8 1693 aa19.36■□□□□ 0.69
AC004540.1-204ENST00000449537 BTG4Q9NY30 223 aa19.36■□□□□ 0.69
AC004540.1-204ENST00000449537 NINLQ9Y2I6 1382 aa19.35■□□□□ 0.69
AC004540.1-204ENST00000449537 KCNQ2O43526 872 aa19.35■□□□□ 0.69
AC004540.1-204ENST00000449537 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
AC004540.1-204ENST00000449537 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
AC004540.1-204ENST00000449537 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
AC004540.1-204ENST00000449537 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
AC004540.1-204ENST00000449537 ROCK1Q13464 1354 aa19.33■□□□□ 0.69
AC004540.1-204ENST00000449537 C1QTNF8P60827 252 aa19.33■□□□□ 0.68
AC004540.1-204ENST00000449537 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
AC004540.1-204ENST00000449537 RPGRIP1LQ68CZ1 1315 aa19.32■□□□□ 0.68
AC004540.1-204ENST00000449537 STK26Q9P289 416 aa19.32■□□□□ 0.68
AC004540.1-204ENST00000449537 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
AC004540.1-204ENST00000449537 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
AC004540.1-204ENST00000449537 PHF8Q9UPP1 1060 aa19.31■□□□□ 0.68
AC004540.1-204ENST00000449537 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
AC004540.1-204ENST00000449537 ARHGEF10O15013 1369 aa19.3■□□□□ 0.68
AC004540.1-204ENST00000449537 KIF1BO60333 1816 aa19.29■□□□□ 0.68
AC004540.1-204ENST00000449537 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
AC004540.1-204ENST00000449537 CLTCL1P53675 1640 aa19.29■□□□□ 0.68
AC004540.1-204ENST00000449537 ADGRB2O60241 1585 aa19.28■□□□□ 0.68
AC004540.1-204ENST00000449537 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
AC004540.1-204ENST00000449537 NRAPQ86VF7 1730 aa19.24■□□□□ 0.67
AC004540.1-204ENST00000449537 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
AC004540.1-204ENST00000449537 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
AC004540.1-204ENST00000449537 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
AC004540.1-204ENST00000449537 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
AC004540.1-204ENST00000449537 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
AC004540.1-204ENST00000449537 THSD7AQ9UPZ6 1657 aa19.2■□□□□ 0.66
AC004540.1-204ENST00000449537 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
AC004540.1-204ENST00000449537 TECPR2O15040 1411 aa19.2■□□□□ 0.66
AC004540.1-204ENST00000449537 ITGAEP38570 1179 aa19.2■□□□□ 0.66
AC004540.1-204ENST00000449537 SPATA31A1Q5TZJ5 1347 aa19.2■□□□□ 0.66
AC004540.1-204ENST00000449537 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
AC004540.1-204ENST00000449537 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
AC004540.1-204ENST00000449537 RREB1Q92766 1687 aa19.18■□□□□ 0.66
AC004540.1-204ENST00000449537 NUP188Q5SRE5 1749 aa19.17■□□□□ 0.66
AC004540.1-204ENST00000449537 NRXN1Q9ULB1 1477 aa19.17■□□□□ 0.66
AC004540.1-204ENST00000449537 RGPD8O14715 1765 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms