RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
AP000253.1-201ENST00000449339 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
AP000253.1-201ENST00000449339 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
AP000253.1-201ENST00000449339 TMEM2Q9UHN6 1383 aa21.58■■□□□ 1.04
AP000253.1-201ENST00000449339 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
AP000253.1-201ENST00000449339 METP08581 1390 aa21.56■■□□□ 1.04
AP000253.1-201ENST00000449339 WAPLQ7Z5K2 1190 aa21.56■■□□□ 1.04
AP000253.1-201ENST00000449339 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
AP000253.1-201ENST00000449339 ERICH6BQ5W0A0 696 aa21.55■■□□□ 1.04
AP000253.1-201ENST00000449339 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
AP000253.1-201ENST00000449339 NLRP1Q9C000 1473 aa21.54■■□□□ 1.04
AP000253.1-201ENST00000449339 PUS7Q96PZ0 661 aaKnown RBP21.53■■□□□ 1.04
AP000253.1-201ENST00000449339 INSRP06213 1382 aa21.53■■□□□ 1.04
AP000253.1-201ENST00000449339 HDGFP51858 240 aaKnown RBP21.53■■□□□ 1.04
AP000253.1-201ENST00000449339 LTKP29376 864 aa21.52■■□□□ 1.04
AP000253.1-201ENST00000449339 DLC1Q96QB1 1528 aa21.51■■□□□ 1.03
AP000253.1-201ENST00000449339 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
AP000253.1-201ENST00000449339 TXNDC2Q86VQ3 553 aa21.49■■□□□ 1.03
AP000253.1-201ENST00000449339 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
AP000253.1-201ENST00000449339 BLMP54132 1417 aaPredicted RBP21.49■■□□□ 1.03
AP000253.1-201ENST00000449339 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
AP000253.1-201ENST00000449339 ANKRD36BQ8N2N9 1353 aa21.48■■□□□ 1.03
AP000253.1-201ENST00000449339 ADAMTS13Q76LX8 1427 aa21.47■■□□□ 1.03
AP000253.1-201ENST00000449339 RIMS1Q86UR5 1692 aaKnown RBP21.46■■□□□ 1.03
AP000253.1-201ENST00000449339 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
AP000253.1-201ENST00000449339 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.03
AP000253.1-201ENST00000449339 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.03
AP000253.1-201ENST00000449339 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
AP000253.1-201ENST00000449339 USP32Q8NFA0 1604 aa21.45■■□□□ 1.02
AP000253.1-201ENST00000449339 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.02
AP000253.1-201ENST00000449339 ATAD2Q6PL18 1390 aa21.45■■□□□ 1.02
AP000253.1-201ENST00000449339 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
AP000253.1-201ENST00000449339 MORC1Q86VD1 984 aa21.44■■□□□ 1.02
AP000253.1-201ENST00000449339 PDE3BQ13370 1112 aa21.44■■□□□ 1.02
AP000253.1-201ENST00000449339 PLEKHG1Q9ULL1 1385 aa21.44■■□□□ 1.02
AP000253.1-201ENST00000449339 CGNL1Q0VF96 1302 aa21.43■■□□□ 1.02
AP000253.1-201ENST00000449339 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
AP000253.1-201ENST00000449339 WDR43Q15061 677 aaKnown RBP eCLIP21.42■■□□□ 1.02
AP000253.1-201ENST00000449339 SLC26A8Q96RN1 970 aa21.42■■□□□ 1.02
AP000253.1-201ENST00000449339 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
AP000253.1-201ENST00000449339 NINLQ9Y2I6 1382 aa21.41■■□□□ 1.02
AP000253.1-201ENST00000449339 CD163L1Q9NR16 1453 aa21.41■■□□□ 1.02
AP000253.1-201ENST00000449339 SLIT1O75093 1534 aa21.41■■□□□ 1.02
AP000253.1-201ENST00000449339 ARHGAP23Q9P227 1491 aa21.41■■□□□ 1.02
AP000253.1-201ENST00000449339 CABP1Q9NZU7 370 aa21.4■■□□□ 1.02
AP000253.1-201ENST00000449339 TECPR2O15040 1411 aa21.4■■□□□ 1.02
AP000253.1-201ENST00000449339 CPS1P31327 1500 aa21.39■■□□□ 1.01
AP000253.1-201ENST00000449339 ROBO2Q9HCK4 1378 aa21.39■■□□□ 1.01
AP000253.1-201ENST00000449339 THEMISQ8N1K5 641 aaPredicted RBP21.38■■□□□ 1.01
AP000253.1-201ENST00000449339 TERF2IPQ9NYB0 399 aa21.37■■□□□ 1.01
AP000253.1-201ENST00000449339 FAM135BQ49AJ0 1406 aa21.37■■□□□ 1.01
AP000253.1-201ENST00000449339 MED14O60244 1454 aa21.37■■□□□ 1.01
AP000253.1-201ENST00000449339 WASLO00401 505 aaPredicted RBP21.36■■□□□ 1.01
AP000253.1-201ENST00000449339 PTPRUQ92729 1446 aa21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 ADAMTSL3P82987 1691 aa21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 SIRT1Q96EB6 747 aa21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 GGNBP2Q9H3C7 697 aa21.35■■□□□ 1.01
AP000253.1-201ENST00000449339 HDGFL2Q7Z4V5 671 aaPredicted RBP21.33■■□□□ 1.01
AP000253.1-201ENST00000449339 NSD2O96028 1365 aa21.33■■□□□ 1
AP000253.1-201ENST00000449339 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1
AP000253.1-201ENST00000449339 CCDC146Q8IYE0 955 aa21.33■■□□□ 1
AP000253.1-201ENST00000449339 POLR3AO14802 1390 aaPredicted RBP21.32■■□□□ 1
AP000253.1-201ENST00000449339 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
AP000253.1-201ENST00000449339 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
AP000253.1-201ENST00000449339 FYB1O15117 783 aa21.31■■□□□ 1
AP000253.1-201ENST00000449339 MTHFSP49914 203 aa21.31■■□□□ 1
AP000253.1-201ENST00000449339 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
AP000253.1-201ENST00000449339 SHPRHQ149N8 1683 aa21.29■■□□□ 1
AP000253.1-201ENST00000449339 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
AP000253.1-201ENST00000449339 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
AP000253.1-201ENST00000449339 AMOTL2Q9Y2J4 779 aa21.29■■□□□ 1
AP000253.1-201ENST00000449339 TBX22Q9Y458 520 aa21.29■■□□□ 1
AP000253.1-201ENST00000449339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.28■■□□□ 1
AP000253.1-201ENST00000449339 ATP7BP35670 1465 aa21.28■■□□□ 1
AP000253.1-201ENST00000449339 ANKRD26Q9UPS8 1709 aa21.28■■□□□ 1
AP000253.1-201ENST00000449339 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
AP000253.1-201ENST00000449339 KIF20BQ96Q89 1820 aa21.27■■□□□ 1
AP000253.1-201ENST00000449339 PRR36Q9H6K5 1346 aa21.27■■□□□ 1
AP000253.1-201ENST00000449339 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
AP000253.1-201ENST00000449339 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
AP000253.1-201ENST00000449339 CCDC61Q9Y6R9 512 aa21.24■□□□□ 0.99
AP000253.1-201ENST00000449339 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
AP000253.1-201ENST00000449339 CPSF1Q10570 1443 aaKnown RBP21.23■□□□□ 0.99
AP000253.1-201ENST00000449339 APAF1O14727 1248 aa21.23■□□□□ 0.99
AP000253.1-201ENST00000449339 ZNF142P52746 1687 aaPredicted RBP21.23■□□□□ 0.99
AP000253.1-201ENST00000449339 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
AP000253.1-201ENST00000449339 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
AP000253.1-201ENST00000449339 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
AP000253.1-201ENST00000449339 SETD1BQ9UPS6 1966 aaKnown RBP21.2■□□□□ 0.99
AP000253.1-201ENST00000449339 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
AP000253.1-201ENST00000449339 FBLN1P23142 703 aa21.2■□□□□ 0.98
AP000253.1-201ENST00000449339 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
AP000253.1-201ENST00000449339 XRN1Q8IZH2 1706 aaKnown RBP21.19■□□□□ 0.98
AP000253.1-201ENST00000449339 AKAP12Q02952 1782 aa21.19■□□□□ 0.98
AP000253.1-201ENST00000449339 ITSN1Q15811 1721 aa21.19■□□□□ 0.98
AP000253.1-201ENST00000449339 CCDC136Q96JN2 1154 aa21.19■□□□□ 0.98
AP000253.1-201ENST00000449339 MON2Q7Z3U7 1717 aa21.18■□□□□ 0.98
AP000253.1-201ENST00000449339 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms