RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 GNAI1P63096 354 aa8.85□□□□□ -0.99
BEST1-202ENST00000449131 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
BEST1-202ENST00000449131 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
BEST1-202ENST00000449131 CAMSAP2Q08AD1 1489 aa8.85□□□□□ -0.99
BEST1-202ENST00000449131 TSR2Q969E8 191 aaKnown RBP8.84□□□□□ -0.99
BEST1-202ENST00000449131 DRC7Q8IY82 874 aa8.84□□□□□ -0.99
BEST1-202ENST00000449131 C22orf23Q9BZE7 217 aa8.84□□□□□ -0.99
BEST1-202ENST00000449131 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
BEST1-202ENST00000449131 DDX49Q9Y6V7 483 aaKnown RBP8.84□□□□□ -0.99
BEST1-202ENST00000449131 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
BEST1-202ENST00000449131 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -1
BEST1-202ENST00000449131 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
BEST1-202ENST00000449131 GPATCH3Q96I76 525 aa8.83□□□□□ -1
BEST1-202ENST00000449131 PRAM1Q96QH2 718 aa8.83□□□□□ -1
BEST1-202ENST00000449131 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
BEST1-202ENST00000449131 PRKAR2BP31323 418 aa8.83□□□□□ -1
BEST1-202ENST00000449131 SYAP1Q96A49 352 aaPredicted RBP8.83□□□□□ -1
BEST1-202ENST00000449131 CHMP5Q9NZZ3 219 aa8.83□□□□□ -1
BEST1-202ENST00000449131 NPHP1O15259 732 aa8.83□□□□□ -1
BEST1-202ENST00000449131 AAMPQ13685 434 aa8.83□□□□□ -1
BEST1-202ENST00000449131 PPP4R3CPQ6ZMV5 832 aa8.83□□□□□ -1
BEST1-202ENST00000449131 RPRD2Q5VT52 1461 aaKnown RBP8.83□□□□□ -1
BEST1-202ENST00000449131 PKNOX2Q96KN3 472 aa8.83□□□□□ -1
BEST1-202ENST00000449131 ATP10BO94823 1461 aa8.82□□□□□ -1
BEST1-202ENST00000449131 TEFQ10587 303 aa8.82□□□□□ -1
BEST1-202ENST00000449131 CEP170Q5SW79 1584 aa8.82□□□□□ -1
BEST1-202ENST00000449131 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
BEST1-202ENST00000449131 KIAA0556O60303 1618 aa8.82□□□□□ -1
BEST1-202ENST00000449131 GOLGA6L6A8MZA4 724 aa8.81□□□□□ -1
BEST1-202ENST00000449131 RAPGEF3O95398 923 aa8.81□□□□□ -1
BEST1-202ENST00000449131 CHAF1AQ13111 956 aaPredicted RBP8.81□□□□□ -1
BEST1-202ENST00000449131 GORABQ5T7V8 394 aa8.81□□□□□ -1
BEST1-202ENST00000449131 CCDC141Q6ZP82 1450 aa8.81□□□□□ -1
BEST1-202ENST00000449131 NRDCO43847 1150 aa8.81□□□□□ -1
BEST1-202ENST00000449131 KIAA2012Q0VF49 1180 aa8.81□□□□□ -1
BEST1-202ENST00000449131 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.81□□□□□ -1
BEST1-202ENST00000449131 UGGT2Q9NYU1 1516 aa8.81□□□□□ -1
BEST1-202ENST00000449131 SAMD9Q5K651 1589 aa8.81□□□□□ -1
BEST1-202ENST00000449131 REC8O95072 547 aa8.8□□□□□ -1
BEST1-202ENST00000449131 SLFN5Q08AF3 891 aa8.8□□□□□ -1
BEST1-202ENST00000449131 CABP1Q9NZU7 370 aa8.8□□□□□ -1
BEST1-202ENST00000449131 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
BEST1-202ENST00000449131 C1orf115Q9H7X2 142 aa8.8□□□□□ -1
BEST1-202ENST00000449131 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
BEST1-202ENST00000449131 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
BEST1-202ENST00000449131 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
BEST1-202ENST00000449131 GPATCH8Q9UKJ3 1502 aaKnown RBP8.79□□□□□ -1
BEST1-202ENST00000449131 CFAP43Q8NDM7 1665 aa8.79□□□□□ -1
BEST1-202ENST00000449131 RAPGEF6Q8TEU7 1601 aa8.79□□□□□ -1
BEST1-202ENST00000449131 HSP90B1P14625 803 aaKnown RBP8.79□□□□□ -1
BEST1-202ENST00000449131 GNL2Q13823 731 aaKnown RBP8.79□□□□□ -1
BEST1-202ENST00000449131 C1orf141Q5JVX7 400 aa8.79□□□□□ -1
BEST1-202ENST00000449131 SKOR2Q2VWA4 1001 aaPredicted RBP8.79□□□□□ -1
BEST1-202ENST00000449131 WDR63Q8IWG1 891 aa8.79□□□□□ -1
BEST1-202ENST00000449131 WWC1Q8IX03 1113 aa8.79□□□□□ -1
BEST1-202ENST00000449131 CDK19Q9BWU1 502 aa8.79□□□□□ -1
BEST1-202ENST00000449131 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
BEST1-202ENST00000449131 TXNDC2Q86VQ3 553 aa8.78□□□□□ -1
BEST1-202ENST00000449131 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
BEST1-202ENST00000449131 C9orf78Q9NZ63 289 aaPredicted RBP8.78□□□□□ -1
BEST1-202ENST00000449131 TAF7LQ5H9L4 462 aa8.78□□□□□ -1
BEST1-202ENST00000449131 NUP160Q12769 1436 aa8.78□□□□□ -1
BEST1-202ENST00000449131 MPNDQ8N594 471 aa8.78□□□□□ -1
BEST1-202ENST00000449131 NLRP6P59044 892 aa8.77□□□□□ -1.01
BEST1-202ENST00000449131 TWISTNBQ3B726 338 aaPredicted RBP8.77□□□□□ -1.01
BEST1-202ENST00000449131 DIAPH3Q9NSV4 1193 aa8.77□□□□□ -1.01
BEST1-202ENST00000449131 SLC52A1Q9NWF4 448 aa8.77□□□□□ -1.01
BEST1-202ENST00000449131 HTATSF1O43719 755 aaKnown RBP8.77□□□□□ -1.01
BEST1-202ENST00000449131 INTS3Q68E01 1043 aaKnown RBP8.77□□□□□ -1.01
BEST1-202ENST00000449131 PSME1Q06323 249 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 ATF7IPQ6VMQ6 1270 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 NSD3Q9BZ95 1437 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 CDC45O75419 566 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 MVPQ14764 893 aaKnown RBP8.76□□□□□ -1.01
BEST1-202ENST00000449131 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
BEST1-202ENST00000449131 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
BEST1-202ENST00000449131 TRAK2O60296 914 aa8.75□□□□□ -1.01
BEST1-202ENST00000449131 CSPP1Q1MSJ5 1256 aa8.75□□□□□ -1.01
BEST1-202ENST00000449131 SULT6B1Q6IMI4 303 aa8.75□□□□□ -1.01
BEST1-202ENST00000449131 RPGRIP1LQ68CZ1 1315 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 IGHDP01880 384 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 NEXNQ0ZGT2 675 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.74□□□□□ -1.01
BEST1-202ENST00000449131 PHF14O94880 888 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 TMPOP42166 694 aaKnown RBP8.74□□□□□ -1.01
BEST1-202ENST00000449131 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 DISP3Q9P2K9 1392 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 IFIT2P09913 472 aaKnown RBP8.74□□□□□ -1.01
BEST1-202ENST00000449131 DUSP27Q5VZP5 1158 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 RUFY2Q8WXA3 655 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 KIF14Q15058 1648 aa8.74□□□□□ -1.01
BEST1-202ENST00000449131 ERCC6L2Q5T890 1561 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 NUCB2P80303 420 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 MCTP1Q6DN14 999 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 RNF214Q8ND24 703 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 TNNQ9UQP3 1299 aa8.73□□□□□ -1.01
BEST1-202ENST00000449131 CT47B1P0C2W7 299 aaPredicted RBP8.73□□□□□ -1.01
BEST1-202ENST00000449131 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms