RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NPHP3Q7Z494 1330 aa27.14■■□□□ 1.93
CHCHD3-203ENST00000448878 LAMC1P11047 1609 aa27.13■■□□□ 1.93
CHCHD3-203ENST00000448878 FOXO3O43524 673 aa27.12■■□□□ 1.93
CHCHD3-203ENST00000448878 FOXD1Q16676 465 aa27.12■■□□□ 1.93
CHCHD3-203ENST00000448878 STK26Q9P289 416 aa27.12■■□□□ 1.93
CHCHD3-203ENST00000448878 RGL3Q3MIN7 710 aa27.08■■□□□ 1.93
CHCHD3-203ENST00000448878 ZRANB1Q9UGI0 708 aa27.08■■□□□ 1.93
CHCHD3-203ENST00000448878 ATRNO75882 1429 aa27.07■■□□□ 1.92
CHCHD3-203ENST00000448878 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
CHCHD3-203ENST00000448878 WAPLQ7Z5K2 1190 aa27.06■■□□□ 1.92
CHCHD3-203ENST00000448878 PPLO60437 1756 aa27.06■■□□□ 1.92
CHCHD3-203ENST00000448878 COL22A1Q8NFW1 1626 aaPredicted RBP27.05■■□□□ 1.92
CHCHD3-203ENST00000448878 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
CHCHD3-203ENST00000448878 LRPPRCP42704 1394 aaKnown RBP27.04■■□□□ 1.92
CHCHD3-203ENST00000448878 PRAG1Q86YV5 1406 aa27.03■■□□□ 1.92
CHCHD3-203ENST00000448878 MYOM2P54296 1465 aa27.02■■□□□ 1.92
CHCHD3-203ENST00000448878 GJD4Q96KN9 370 aaPredicted RBP27.02■■□□□ 1.92
CHCHD3-203ENST00000448878 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.91
CHCHD3-203ENST00000448878 BCL9LQ86UU0 1499 aa27■■□□□ 1.91
CHCHD3-203ENST00000448878 PXDNQ92626 1479 aa27■■□□□ 1.91
CHCHD3-203ENST00000448878 TMEM132EQ6IEE7 984 aa27■■□□□ 1.91
CHCHD3-203ENST00000448878 PLEKHG5O94827 1062 aa26.99■■□□□ 1.91
CHCHD3-203ENST00000448878 CCDC125Q86Z20 511 aa26.99■■□□□ 1.91
CHCHD3-203ENST00000448878 HAP1P54257 671 aaPredicted RBP26.98■■□□□ 1.91
CHCHD3-203ENST00000448878 MARF1Q9Y4F3 1742 aaKnown RBP26.96■■□□□ 1.91
CHCHD3-203ENST00000448878 CCDC144AA2RUR9 1427 aa26.96■■□□□ 1.91
CHCHD3-203ENST00000448878 UNC5CLQ8IV45 518 aa26.94■■□□□ 1.9
CHCHD3-203ENST00000448878 KRT28Q7Z3Y7 464 aa26.93■■□□□ 1.9
CHCHD3-203ENST00000448878 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
CHCHD3-203ENST00000448878 SPATA31A3Q5VYP0 1347 aa26.91■■□□□ 1.9
CHCHD3-203ENST00000448878 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
CHCHD3-203ENST00000448878 ABCC11Q96J66 1382 aa26.89■■□□□ 1.9
CHCHD3-203ENST00000448878 LMOD2Q6P5Q4 547 aa26.89■■□□□ 1.9
CHCHD3-203ENST00000448878 CCDC9Q9Y3X0 531 aaKnown RBP26.89■■□□□ 1.9
CHCHD3-203ENST00000448878 TECPR2O15040 1411 aa26.88■■□□□ 1.89
CHCHD3-203ENST00000448878 SF3B2Q13435 895 aaKnown RBP26.87■■□□□ 1.89
CHCHD3-203ENST00000448878 MPHOSPH9Q99550 1183 aa26.87■■□□□ 1.89
CHCHD3-203ENST00000448878 SRCAPQ6ZRS2 3230 aa26.87■■□□□ 1.89
CHCHD3-203ENST00000448878 RALGAPBQ86X10 1494 aa26.87■■□□□ 1.89
CHCHD3-203ENST00000448878 PSME1Q06323 249 aa26.86■■□□□ 1.89
CHCHD3-203ENST00000448878 CABLES1Q8TDN4 633 aa26.86■■□□□ 1.89
CHCHD3-203ENST00000448878 PHF8Q9UPP1 1060 aa26.85■■□□□ 1.89
CHCHD3-203ENST00000448878 EP400Q96L91 3159 aa26.85■■□□□ 1.89
CHCHD3-203ENST00000448878 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
CHCHD3-203ENST00000448878 YTHDC2Q9H6S0 1430 aaKnown RBP26.84■■□□□ 1.89
CHCHD3-203ENST00000448878 FMN2Q9NZ56 1722 aa26.84■■□□□ 1.89
CHCHD3-203ENST00000448878 SLIT2O94813 1529 aa26.84■■□□□ 1.89
CHCHD3-203ENST00000448878 KIF1AQ12756 1690 aa26.83■■□□□ 1.89
CHCHD3-203ENST00000448878 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.83■■□□□ 1.89
CHCHD3-203ENST00000448878 SAFB2Q14151 953 aaKnown RBP eCLIP26.83■■□□□ 1.894e-6■■■■□ 19.9
CHCHD3-203ENST00000448878 DEFB132Q7Z7B7 95 aa26.83■■□□□ 1.89
CHCHD3-203ENST00000448878 SEPT12Q8IYM1 358 aa26.83■■□□□ 1.89
CHCHD3-203ENST00000448878 GLI3P10071 1580 aa26.83■■□□□ 1.89
CHCHD3-203ENST00000448878 BLMP54132 1417 aaPredicted RBP26.82■■□□□ 1.88
CHCHD3-203ENST00000448878 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
CHCHD3-203ENST00000448878 A0A0G2JS52 829 aa26.81■■□□□ 1.88
CHCHD3-203ENST00000448878 MYT1Q01538 1121 aa26.81■■□□□ 1.88
CHCHD3-203ENST00000448878 IFT172Q9UG01 1749 aa26.81■■□□□ 1.88
CHCHD3-203ENST00000448878 PIK3C2GO75747 1445 aa26.81■■□□□ 1.88
CHCHD3-203ENST00000448878 USP32Q8NFA0 1604 aa26.79■■□□□ 1.88
CHCHD3-203ENST00000448878 DHX57Q6P158 1386 aaKnown RBP26.78■■□□□ 1.88
CHCHD3-203ENST00000448878 TNS3Q68CZ2 1445 aa26.78■■□□□ 1.88
CHCHD3-203ENST00000448878 RGPD8O14715 1765 aaPredicted RBP26.78■■□□□ 1.88
CHCHD3-203ENST00000448878 VPS72Q15906 364 aa26.77■■□□□ 1.88
CHCHD3-203ENST00000448878 CFAP70Q5T0N1 1121 aa26.77■■□□□ 1.88
CHCHD3-203ENST00000448878 SIRT1Q96EB6 747 aa26.77■■□□□ 1.88
CHCHD3-203ENST00000448878 C14orf93Q9H972 538 aaKnown RBP26.77■■□□□ 1.88
CHCHD3-203ENST00000448878 PMFBP1Q8TBY8 1022 aa26.76■■□□□ 1.87
CHCHD3-203ENST00000448878 PRAM1Q96QH2 718 aa26.76■■□□□ 1.87
CHCHD3-203ENST00000448878 POGKQ9P215 609 aa26.76■■□□□ 1.87
CHCHD3-203ENST00000448878 BRWD3Q6RI45 1802 aa26.76■■□□□ 1.87
CHCHD3-203ENST00000448878 KRT27Q7Z3Y8 459 aa26.74■■□□□ 1.87
CHCHD3-203ENST00000448878 SBNO1A3KN83 1393 aa26.71■■□□□ 1.87
CHCHD3-203ENST00000448878 ARHGEF10O15013 1369 aa26.71■■□□□ 1.87
CHCHD3-203ENST00000448878 FAM83GA6ND36 823 aa26.7■■□□□ 1.86
CHCHD3-203ENST00000448878 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.86
CHCHD3-203ENST00000448878 NRXN1Q9ULB1 1477 aa26.68■■□□□ 1.86
CHCHD3-203ENST00000448878 ONECUT3O60422 494 aaPredicted RBP26.67■■□□□ 1.86
CHCHD3-203ENST00000448878 FAM98CQ17RN3 349 aaKnown RBP26.67■■□□□ 1.86
CHCHD3-203ENST00000448878 NWD2Q9ULI1 1742 aa26.66■■□□□ 1.86
CHCHD3-203ENST00000448878 BAG6P46379 1132 aa26.66■■□□□ 1.86
CHCHD3-203ENST00000448878 HIRIP3Q9BW71 556 aaPredicted RBP26.66■■□□□ 1.86
CHCHD3-203ENST00000448878 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
CHCHD3-203ENST00000448878 PSDA5PKW4 1024 aaPredicted RBP26.64■■□□□ 1.86
CHCHD3-203ENST00000448878 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.86
CHCHD3-203ENST00000448878 ABCA3Q99758 1704 aa26.62■■□□□ 1.85
CHCHD3-203ENST00000448878 GPRASP1Q5JY77 1395 aa26.61■■□□□ 1.85
CHCHD3-203ENST00000448878 MINK1Q8N4C8 1332 aaPredicted RBP26.61■■□□□ 1.85
CHCHD3-203ENST00000448878 PAK3O75914 559 aaPredicted RBP26.6■■□□□ 1.85
CHCHD3-203ENST00000448878 ANKARQ7Z5J8 1434 aa26.59■■□□□ 1.85
CHCHD3-203ENST00000448878 KDM2AQ9Y2K7 1162 aa26.59■■□□□ 1.85
CHCHD3-203ENST00000448878 FAM182BQ5T319 152 aa26.58■■□□□ 1.85
CHCHD3-203ENST00000448878 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.85
CHCHD3-203ENST00000448878 NGDNQ8NEJ9 315 aaKnown RBP26.57■■□□□ 1.84
CHCHD3-203ENST00000448878 EN1Q05925 392 aaPredicted RBP26.56■■□□□ 1.84
CHCHD3-203ENST00000448878 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
CHCHD3-203ENST00000448878 HRCP23327 699 aa26.52■■□□□ 1.84
CHCHD3-203ENST00000448878 EIF3AQ14152 1382 aaKnown RBP26.52■■□□□ 1.84
CHCHD3-203ENST00000448878 PRDM11Q9NQV5 511 aa26.52■■□□□ 1.84
CHCHD3-203ENST00000448878 COL14A1Q05707 1796 aaKnown RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms