RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
CPSF7-206ENST00000448745 TMEM2Q9UHN6 1383 aa11.05□□□□□ -0.64
CPSF7-206ENST00000448745 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
CPSF7-206ENST00000448745 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
CPSF7-206ENST00000448745 PRKCSHP14314 528 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-206ENST00000448745 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
CPSF7-206ENST00000448745 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
CPSF7-206ENST00000448745 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
CPSF7-206ENST00000448745 GPRASP1Q5JY77 1395 aa11.03□□□□□ -0.64
CPSF7-206ENST00000448745 LTKP29376 864 aa11.02□□□□□ -0.65
CPSF7-206ENST00000448745 KDM2AQ9Y2K7 1162 aa11.02□□□□□ -0.65
CPSF7-206ENST00000448745 THEMISQ8N1K5 641 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-206ENST00000448745 IL27Q8NEV9 243 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-206ENST00000448745 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 NRXN3Q9Y4C0 1643 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
CPSF7-206ENST00000448745 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-206ENST00000448745 CENPQQ7L2Z9 268 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-206ENST00000448745 SETD1AO15047 1707 aaKnown RBP10.99□□□□□ -0.65
CPSF7-206ENST00000448745 GSE1Q14687 1217 aa10.99□□□□□ -0.65
CPSF7-206ENST00000448745 VGFO15240 615 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
CPSF7-206ENST00000448745 KIAA1210Q9ULL0 1709 aa10.98□□□□□ -0.65
CPSF7-206ENST00000448745 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 SETBP1Q9Y6X0 1596 aa10.98□□□□□ -0.65
CPSF7-206ENST00000448745 MED14O60244 1454 aa10.98□□□□□ -0.65
CPSF7-206ENST00000448745 SCAF11Q99590 1463 aaKnown RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
CPSF7-206ENST00000448745 IQGAP1P46940 1657 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 ASXL1Q8IXJ9 1541 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-206ENST00000448745 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 TXNDC2Q86VQ3 553 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 ADGRB1O14514 1584 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 PLEKHG1Q9ULL1 1385 aa10.97□□□□□ -0.65
CPSF7-206ENST00000448745 ADAMTS13Q76LX8 1427 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 STRCQ7RTU9 1775 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 HSPA2P54652 639 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 NFKBIBQ15653 356 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 NBPF1Q3BBV0 1214 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPSF7-206ENST00000448745 C14orf93Q9H972 538 aaKnown RBP10.96□□□□□ -0.65
CPSF7-206ENST00000448745 ALKQ9UM73 1620 aa10.96□□□□□ -0.65
CPSF7-206ENST00000448745 CFAP70Q5T0N1 1121 aa10.95□□□□□ -0.66
CPSF7-206ENST00000448745 TMF1P82094 1093 aa10.95□□□□□ -0.66
CPSF7-206ENST00000448745 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-206ENST00000448745 PLIN1O60240 522 aa10.94□□□□□ -0.66
CPSF7-206ENST00000448745 ANKLE2Q86XL3 938 aa10.94□□□□□ -0.66
CPSF7-206ENST00000448745 DISP3Q9P2K9 1392 aa10.94□□□□□ -0.66
CPSF7-206ENST00000448745 HDGFP51858 240 aaKnown RBP10.93□□□□□ -0.66
CPSF7-206ENST00000448745 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
CPSF7-206ENST00000448745 EID1Q9Y6B2 187 aa10.93□□□□□ -0.66
CPSF7-206ENST00000448745 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
CPSF7-206ENST00000448745 METP08581 1390 aa10.92□□□□□ -0.66
CPSF7-206ENST00000448745 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
CPSF7-206ENST00000448745 PANK3Q9H999 370 aa10.92□□□□□ -0.66
CPSF7-206ENST00000448745 NPHP4O75161 1426 aaPredicted RBP10.91□□□□□ -0.66
CPSF7-206ENST00000448745 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
CPSF7-206ENST00000448745 TESK2Q96S53 571 aa10.91□□□□□ -0.66
CPSF7-206ENST00000448745 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CPSF7-206ENST00000448745 TMEM132EQ6IEE7 984 aa10.9□□□□□ -0.66
CPSF7-206ENST00000448745 DIP2AQ14689 1571 aa10.9□□□□□ -0.66
CPSF7-206ENST00000448745 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-206ENST00000448745 SLC26A8Q96RN1 970 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 ZNF521Q96K83 1311 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 BRPF3Q9ULD4 1205 aa10.89□□□□□ -0.67
CPSF7-206ENST00000448745 MYOM1P52179 1685 aa10.88□□□□□ -0.67
CPSF7-206ENST00000448745 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
CPSF7-206ENST00000448745 PLEKHH1Q9ULM0 1364 aa10.88□□□□□ -0.67
CPSF7-206ENST00000448745 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
CPSF7-206ENST00000448745 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 ADAMTS8Q9UP79 889 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 TECPR2O15040 1411 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 YTHDC2Q9H6S0 1430 aaKnown RBP10.87□□□□□ -0.67
CPSF7-206ENST00000448745 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
CPSF7-206ENST00000448745 ARHGEF28Q8N1W1 1705 aaKnown RBP10.87□□□□□ -0.67
CPSF7-206ENST00000448745 NPC1L1Q9UHC9 1359 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 NKTRP30414 1462 aaKnown RBP10.87□□□□□ -0.67
CPSF7-206ENST00000448745 PPP2R1AP30153 589 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 FAM43AQ8N2R8 423 aa10.87□□□□□ -0.67
CPSF7-206ENST00000448745 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 SLFN5Q08AF3 891 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 NGEFQ8N5V2 710 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 KNSTRNQ9Y448 316 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 ABCC11Q96J66 1382 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 PIK3R4Q99570 1358 aa10.86□□□□□ -0.67
CPSF7-206ENST00000448745 STRCP1A6NGW2 1772 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms