RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-208ENST00000448732 ABCC11Q96J66 1382 aa34.48■■■■□ 3.11
R3HDM2-208ENST00000448732 TMEM132EQ6IEE7 984 aa34.47■■■■□ 3.11
R3HDM2-208ENST00000448732 AFF2P51816 1311 aa34.47■■■■□ 3.11
R3HDM2-208ENST00000448732 WAPLQ7Z5K2 1190 aa34.46■■■■□ 3.11
R3HDM2-208ENST00000448732 CDC42BPGQ6DT37 1551 aa34.45■■■■□ 3.11
R3HDM2-208ENST00000448732 RXRBP28702 533 aa34.45■■■■□ 3.11
R3HDM2-208ENST00000448732 RAB3GAP2Q9H2M9 1393 aa34.42■■■■□ 3.1
R3HDM2-208ENST00000448732 ESCO1Q5FWF5 840 aa34.41■■■■□ 3.1
R3HDM2-208ENST00000448732 C8orf37Q96NL8 207 aa34.41■■■■□ 3.1
R3HDM2-208ENST00000448732 C14orf93Q9H972 538 aaKnown RBP34.41■■■■□ 3.1
R3HDM2-208ENST00000448732 KNDC1Q76NI1 1749 aa34.39■■■■□ 3.1
R3HDM2-208ENST00000448732 SIRT1Q96EB6 747 aa34.39■■■■□ 3.1
R3HDM2-208ENST00000448732 YTHDC2Q9H6S0 1430 aaKnown RBP34.38■■■■□ 3.09
R3HDM2-208ENST00000448732 NPHP3Q7Z494 1330 aa34.37■■■■□ 3.09
R3HDM2-208ENST00000448732 PLEKHH1Q9ULM0 1364 aa34.36■■■■□ 3.09
R3HDM2-208ENST00000448732 NRXN1Q9ULB1 1477 aa34.36■■■■□ 3.09
R3HDM2-208ENST00000448732 CDK12Q9NYV4 1490 aaPredicted RBP34.35■■■■□ 3.09
R3HDM2-208ENST00000448732 ADAMTS2O95450 1211 aa34.34■■■■□ 3.09
R3HDM2-208ENST00000448732 QTRT2Q9H974 415 aaKnown RBP34.34■■■■□ 3.09
R3HDM2-208ENST00000448732 MYOM2P54296 1465 aa34.33■■■■□ 3.09
R3HDM2-208ENST00000448732 NGLY1Q96IV0 654 aa34.33■■■■□ 3.09
R3HDM2-208ENST00000448732 FOXO3O43524 673 aa34.32■■■■□ 3.08
R3HDM2-208ENST00000448732 CFAP70Q5T0N1 1121 aa34.32■■■■□ 3.08
R3HDM2-208ENST00000448732 NUTM2FA1L443 756 aa34.3■■■■□ 3.08
R3HDM2-208ENST00000448732 DHX57Q6P158 1386 aaKnown RBP34.3■■■■□ 3.08
R3HDM2-208ENST00000448732 PXDNQ92626 1479 aa34.3■■■■□ 3.08
R3HDM2-208ENST00000448732 COL22A1Q8NFW1 1626 aaPredicted RBP34.29■■■■□ 3.08
R3HDM2-208ENST00000448732 RBM6P78332 1123 aaKnown RBP34.28■■■■□ 3.08
R3HDM2-208ENST00000448732 UPF1Q92900 1129 aaKnown RBP eCLIP34.28■■■■□ 3.08
R3HDM2-208ENST00000448732 HRCP23327 699 aa34.25■■■■□ 3.07
R3HDM2-208ENST00000448732 FMN2Q9NZ56 1722 aa34.24■■■■□ 3.07
R3HDM2-208ENST00000448732 XPCQ01831 940 aaPredicted RBP34.24■■■■□ 3.07
R3HDM2-208ENST00000448732 FNBP4Q8N3X1 1017 aaPredicted RBP34.23■■■■□ 3.07
R3HDM2-208ENST00000448732 USP21Q9UK80 565 aa34.21■■■■□ 3.07
R3HDM2-208ENST00000448732 PRAM1Q96QH2 718 aa34.18■■■■□ 3.06
R3HDM2-208ENST00000448732 RGS12O14924 1447 aa34.16■■■■□ 3.06
R3HDM2-208ENST00000448732 TRPC5Q9UL62 973 aaPredicted RBP34.16■■■■□ 3.06
R3HDM2-208ENST00000448732 KIF1AQ12756 1690 aa34.15■■■■□ 3.06
R3HDM2-208ENST00000448732 SPATA31A3Q5VYP0 1347 aa34.14■■■■□ 3.06
R3HDM2-208ENST00000448732 DLC1Q96QB1 1528 aa34.14■■■■□ 3.06
R3HDM2-208ENST00000448732 KRT28Q7Z3Y7 464 aa34.13■■■■□ 3.05
R3HDM2-208ENST00000448732 STAC3Q96MF2 364 aa34.13■■■■□ 3.05
R3HDM2-208ENST00000448732 SAFB2Q14151 953 aaKnown RBP eCLIP34.12■■■■□ 3.05
R3HDM2-208ENST00000448732 DCAF11Q8TEB1 546 aa34.12■■■■□ 3.05
R3HDM2-208ENST00000448732 POGKQ9P215 609 aa34.12■■■■□ 3.05
R3HDM2-208ENST00000448732 PHF8Q9UPP1 1060 aa34.12■■■■□ 3.05
R3HDM2-208ENST00000448732 KDM2AQ9Y2K7 1162 aa34.12■■■■□ 3.05
R3HDM2-208ENST00000448732 RGPD8O14715 1765 aaPredicted RBP34.11■■■■□ 3.05
R3HDM2-208ENST00000448732 ADGRB1O14514 1584 aa34.11■■■■□ 3.05
R3HDM2-208ENST00000448732 ATRNO75882 1429 aa34.09■■■■□ 3.05
R3HDM2-208ENST00000448732 MARF1Q9Y4F3 1742 aaKnown RBP34.09■■■■□ 3.05
R3HDM2-208ENST00000448732 PSME1Q06323 249 aa34.07■■■■□ 3.04
R3HDM2-208ENST00000448732 BCL9LQ86UU0 1499 aa34.07■■■■□ 3.04
R3HDM2-208ENST00000448732 TRAK1Q9UPV9 953 aa34.06■■■■□ 3.04
R3HDM2-208ENST00000448732 ANKARQ7Z5J8 1434 aa34.02■■■■□ 3.04
R3HDM2-208ENST00000448732 ADGRB2O60241 1585 aa34.01■■■■□ 3.03
R3HDM2-208ENST00000448732 SBNO1A3KN83 1393 aa33.99■■■■□ 3.03
R3HDM2-208ENST00000448732 TNS3Q68CZ2 1445 aa33.99■■■■□ 3.03
R3HDM2-208ENST00000448732 USP32Q8NFA0 1604 aa33.97■■■■□ 3.03
R3HDM2-208ENST00000448732 PMFBP1Q8TBY8 1022 aa33.96■■■■□ 3.03
R3HDM2-208ENST00000448732 GJD4Q96KN9 370 aaPredicted RBP33.96■■■■□ 3.03
R3HDM2-208ENST00000448732 HIRIP3Q9BW71 556 aaPredicted RBP33.96■■■■□ 3.03
R3HDM2-208ENST00000448732 MINK1Q8N4C8 1332 aaPredicted RBP33.95■■■■□ 3.03
R3HDM2-208ENST00000448732 SLIT2O94813 1529 aa33.94■■■■□ 3.02
R3HDM2-208ENST00000448732 UNC5CLQ8IV45 518 aa33.94■■■■□ 3.02
R3HDM2-208ENST00000448732 ATAD2Q6PL18 1390 aa33.94■■■■□ 3.02
R3HDM2-208ENST00000448732 WASLO00401 505 aaPredicted RBP33.92■■■■□ 3.02
R3HDM2-208ENST00000448732 ARHGEF10O15013 1369 aa33.92■■■■□ 3.02
R3HDM2-208ENST00000448732 EIF3AQ14152 1382 aaKnown RBP33.92■■■■□ 3.02
R3HDM2-208ENST00000448732 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.92■■■■□ 3.02
R3HDM2-208ENST00000448732 CABLES1Q8TDN4 633 aa33.91■■■■□ 3.02
R3HDM2-208ENST00000448732 HAP1P54257 671 aaPredicted RBP33.9■■■■□ 3.02
R3HDM2-208ENST00000448732 PRR36Q9H6K5 1346 aa33.89■■■■□ 3.02
R3HDM2-208ENST00000448732 LMOD2Q6P5Q4 547 aa33.89■■■■□ 3.02
R3HDM2-208ENST00000448732 TULP4Q9NRJ4 1543 aa33.87■■■■□ 3.01
R3HDM2-208ENST00000448732 GPRASP1Q5JY77 1395 aa33.84■■■■□ 3.01
R3HDM2-208ENST00000448732 PLEKHG5O94827 1062 aa33.83■■■■□ 3.01
R3HDM2-208ENST00000448732 RALGAPBQ86X10 1494 aa33.82■■■■□ 3.01
R3HDM2-208ENST00000448732 ARHGEF28Q8N1W1 1705 aaKnown RBP33.82■■■■□ 3
R3HDM2-208ENST00000448732 TRPM3Q9HCF6 1732 aaPredicted RBP33.82■■■■□ 3
R3HDM2-208ENST00000448732 GLI3P10071 1580 aa33.81■■■■□ 3
R3HDM2-208ENST00000448732 ABCA3Q99758 1704 aa33.8■■■■□ 3
R3HDM2-208ENST00000448732 FAM83GA6ND36 823 aa33.79■■■■□ 3
R3HDM2-208ENST00000448732 VPS72Q15906 364 aa33.79■■■■□ 3
R3HDM2-208ENST00000448732 NWD2Q9ULI1 1742 aa33.77■■■■□ 3
R3HDM2-208ENST00000448732 CCDC125Q86Z20 511 aa33.77■■■■□ 3
R3HDM2-208ENST00000448732 NGDNQ8NEJ9 315 aaKnown RBP33.77■■■■□ 3
R3HDM2-208ENST00000448732 NUDT16Q96DE0 195 aaKnown RBP33.76■■■□□ 2.99
R3HDM2-208ENST00000448732 ALS2Q96Q42 1657 aa33.76■■■□□ 2.99
R3HDM2-208ENST00000448732 KIAA1210Q9ULL0 1709 aa33.76■■■□□ 2.99
R3HDM2-208ENST00000448732 PLCH1Q4KWH8 1693 aa33.74■■■□□ 2.99
R3HDM2-208ENST00000448732 ONECUT3O60422 494 aaPredicted RBP33.72■■■□□ 2.99
R3HDM2-208ENST00000448732 CDK19Q9BWU1 502 aa33.72■■■□□ 2.99
R3HDM2-208ENST00000448732 ATP7BP35670 1465 aa33.71■■■□□ 2.99
R3HDM2-208ENST00000448732 NBPF1Q3BBV0 1214 aa33.71■■■□□ 2.99
R3HDM2-208ENST00000448732 PAK3O75914 559 aaPredicted RBP33.69■■■□□ 2.98
R3HDM2-208ENST00000448732 SEPT12Q8IYM1 358 aa33.69■■■□□ 2.98
R3HDM2-208ENST00000448732 EP400Q96L91 3159 aa33.68■■■□□ 2.98
R3HDM2-208ENST00000448732 ITSN1Q15811 1721 aa33.68■■■□□ 2.98
R3HDM2-208ENST00000448732 CCDC9Q9Y3X0 531 aaKnown RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms