RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
TRIM4-204ENST00000447480 DDX10Q13206 875 aaKnown RBP10.37□□□□□ -0.75
TRIM4-204ENST00000447480 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
TRIM4-204ENST00000447480 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
TRIM4-204ENST00000447480 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
TRIM4-204ENST00000447480 C3P01024 1663 aa10.35□□□□□ -0.75
TRIM4-204ENST00000447480 STK25O00506 426 aa10.35□□□□□ -0.75
TRIM4-204ENST00000447480 PLCG2P16885 1265 aa10.35□□□□□ -0.75
TRIM4-204ENST00000447480 SLC52A1Q9NWF4 448 aa10.35□□□□□ -0.75
TRIM4-204ENST00000447480 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
TRIM4-204ENST00000447480 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
TRIM4-204ENST00000447480 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
TRIM4-204ENST00000447480 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
TRIM4-204ENST00000447480 STK24Q9Y6E0 443 aa10.34□□□□□ -0.75
TRIM4-204ENST00000447480 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
TRIM4-204ENST00000447480 PREX1Q8TCU6 1659 aa10.34□□□□□ -0.75
TRIM4-204ENST00000447480 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
TRIM4-204ENST00000447480 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
TRIM4-204ENST00000447480 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
TRIM4-204ENST00000447480 PTPRMP28827 1452 aa10.33□□□□□ -0.76
TRIM4-204ENST00000447480 SPATA31D1Q6ZQQ2 1576 aa10.33□□□□□ -0.76
TRIM4-204ENST00000447480 E9PCH4 1651 aa10.33□□□□□ -0.76
TRIM4-204ENST00000447480 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
TRIM4-204ENST00000447480 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
TRIM4-204ENST00000447480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.763e-9■■■■■ 35
TRIM4-204ENST00000447480 KIF1BO60333 1816 aa10.32□□□□□ -0.76
TRIM4-204ENST00000447480 CFAP65Q6ZU64 1925 aaKnown RBP10.31□□□□□ -0.76
TRIM4-204ENST00000447480 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
TRIM4-204ENST00000447480 TRPM2O94759 1503 aa10.31□□□□□ -0.76
TRIM4-204ENST00000447480 CCDC144AA2RUR9 1427 aa10.31□□□□□ -0.76
TRIM4-204ENST00000447480 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
TRIM4-204ENST00000447480 TNRQ92752 1358 aa10.3□□□□□ -0.76
TRIM4-204ENST00000447480 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
TRIM4-204ENST00000447480 UHRF1BP1Q6BDS2 1440 aa10.3□□□□□ -0.76
TRIM4-204ENST00000447480 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
TRIM4-204ENST00000447480 TONSLQ96HA7 1378 aa10.29□□□□□ -0.76
TRIM4-204ENST00000447480 PTPRTO14522 1441 aa10.29□□□□□ -0.76
TRIM4-204ENST00000447480 ZNF142P52746 1687 aaPredicted RBP10.28□□□□□ -0.76
TRIM4-204ENST00000447480 NOS1P29475 1434 aa10.28□□□□□ -0.76
TRIM4-204ENST00000447480 MYO3AQ8NEV4 1616 aa10.27□□□□□ -0.77
TRIM4-204ENST00000447480 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
TRIM4-204ENST00000447480 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
TRIM4-204ENST00000447480 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
TRIM4-204ENST00000447480 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
TRIM4-204ENST00000447480 THEMISQ8N1K5 641 aaPredicted RBP10.26□□□□□ -0.77
TRIM4-204ENST00000447480 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
TRIM4-204ENST00000447480 BCANQ96GW7 911 aa10.26□□□□□ -0.77
TRIM4-204ENST00000447480 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRIM4-204ENST00000447480 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
TRIM4-204ENST00000447480 CEP170BQ9Y4F5 1589 aaPredicted RBP10.25□□□□□ -0.77
TRIM4-204ENST00000447480 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
TRIM4-204ENST00000447480 ADGRB3O60242 1522 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 UGGT1Q9NYU2 1555 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 SOX12O15370 315 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 DPY19L2Q6NUT2 758 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 ZBED9Q6R2W3 1325 aa10.24□□□□□ -0.77
TRIM4-204ENST00000447480 PHF8Q9UPP1 1060 aa10.23□□□□□ -0.77
TRIM4-204ENST00000447480 EID1Q9Y6B2 187 aa10.23□□□□□ -0.77
TRIM4-204ENST00000447480 ANKRD30BQ9BXX2 1392 aa10.23□□□□□ -0.77
TRIM4-204ENST00000447480 SYNMO15061 1565 aa10.22□□□□□ -0.77
TRIM4-204ENST00000447480 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
TRIM4-204ENST00000447480 UBR1Q8IWV7 1749 aa10.21□□□□□ -0.77
TRIM4-204ENST00000447480 SIN3AQ96ST3 1273 aa10.21□□□□□ -0.77
TRIM4-204ENST00000447480 PLA2R1Q13018 1463 aa10.21□□□□□ -0.78
TRIM4-204ENST00000447480 CLTCL1P53675 1640 aa10.21□□□□□ -0.78
TRIM4-204ENST00000447480 HNRNPUQ00839 825 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIM4-204ENST00000447480 RNF123Q5XPI4 1314 aa10.2□□□□□ -0.78
TRIM4-204ENST00000447480 SCUBE2Q9NQ36 999 aa10.2□□□□□ -0.78
TRIM4-204ENST00000447480 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
TRIM4-204ENST00000447480 TMEM131LA2VDJ0 1609 aa10.19□□□□□ -0.78
TRIM4-204ENST00000447480 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 CEBPAP49715 358 aaPredicted RBP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 EIF4G2P78344 907 aaKnown RBP eCLIP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 ZNF326Q5BKZ1 582 aaKnown RBP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 MS4A4AQ96JQ5 239 aa10.19□□□□□ -0.78
TRIM4-204ENST00000447480 MFRPQ9BY79 579 aa10.19□□□□□ -0.78
TRIM4-204ENST00000447480 POLR1AO95602 1720 aaPredicted RBP10.19□□□□□ -0.78
TRIM4-204ENST00000447480 SLIT1O75093 1534 aa10.18□□□□□ -0.78
TRIM4-204ENST00000447480 NLRP6P59044 892 aa10.18□□□□□ -0.78
TRIM4-204ENST00000447480 IDI1Q13907 227 aa10.18□□□□□ -0.78
TRIM4-204ENST00000447480 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
TRIM4-204ENST00000447480 FBXO22Q8NEZ5 403 aa10.17□□□□□ -0.78
TRIM4-204ENST00000447480 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
TRIM4-204ENST00000447480 LAMC1P11047 1609 aa10.17□□□□□ -0.78
TRIM4-204ENST00000447480 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
TRIM4-204ENST00000447480 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
TRIM4-204ENST00000447480 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
TRIM4-204ENST00000447480 ANP32AP39687 249 aaKnown RBP10.16□□□□□ -0.78
TRIM4-204ENST00000447480 IPO9Q96P70 1041 aaKnown RBP10.16□□□□□ -0.78
TRIM4-204ENST00000447480 MYO5BQ9ULV0 1848 aa10.16□□□□□ -0.78
TRIM4-204ENST00000447480 PPLO60437 1756 aa10.16□□□□□ -0.78
TRIM4-204ENST00000447480 DIP2AQ14689 1571 aa10.15□□□□□ -0.78
TRIM4-204ENST00000447480 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
TRIM4-204ENST00000447480 MYOM2P54296 1465 aa10.15□□□□□ -0.78
TRIM4-204ENST00000447480 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
TRIM4-204ENST00000447480 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
TRIM4-204ENST00000447480 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms