RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CHAF1AQ13111 956 aaPredicted RBP20.54■□□□□ 0.88
TCOF1-206ENST00000445265 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
TCOF1-206ENST00000445265 PZPP20742 1482 aa20.54■□□□□ 0.88
TCOF1-206ENST00000445265 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
TCOF1-206ENST00000445265 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
TCOF1-206ENST00000445265 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
TCOF1-206ENST00000445265 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
TCOF1-206ENST00000445265 NUP160Q12769 1436 aa20.53■□□□□ 0.88
TCOF1-206ENST00000445265 ATF7IPQ6VMQ6 1270 aa20.52■□□□□ 0.88
TCOF1-206ENST00000445265 PRKAR2BP31323 418 aa20.52■□□□□ 0.87
TCOF1-206ENST00000445265 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
TCOF1-206ENST00000445265 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
TCOF1-206ENST00000445265 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
TCOF1-206ENST00000445265 INTS3Q68E01 1043 aaKnown RBP20.51■□□□□ 0.87
TCOF1-206ENST00000445265 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
TCOF1-206ENST00000445265 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
TCOF1-206ENST00000445265 CDC45O75419 566 aa20.5■□□□□ 0.87
TCOF1-206ENST00000445265 PHF14O94880 888 aa20.5■□□□□ 0.87
TCOF1-206ENST00000445265 NOB1Q9ULX3 412 aaKnown RBP20.5■□□□□ 0.87
TCOF1-206ENST00000445265 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
TCOF1-206ENST00000445265 CSPP1Q1MSJ5 1256 aa20.49■□□□□ 0.87
TCOF1-206ENST00000445265 UHRF1BP1Q6BDS2 1440 aa20.49■□□□□ 0.87
TCOF1-206ENST00000445265 NUCB2P80303 420 aa20.49■□□□□ 0.87
TCOF1-206ENST00000445265 NOL8Q76FK4 1167 aaKnown RBP20.48■□□□□ 0.87
TCOF1-206ENST00000445265 NAP1L2Q9ULW6 460 aaPredicted RBP20.48■□□□□ 0.87
TCOF1-206ENST00000445265 ATAD2Q6PL18 1390 aa20.48■□□□□ 0.87
TCOF1-206ENST00000445265 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
TCOF1-206ENST00000445265 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
TCOF1-206ENST00000445265 NRDCO43847 1150 aa20.48■□□□□ 0.87
TCOF1-206ENST00000445265 RARSP54136 660 aaKnown RBP20.47■□□□□ 0.87
TCOF1-206ENST00000445265 ZNF428Q96B54 188 aa20.47■□□□□ 0.87
TCOF1-206ENST00000445265 GCC2Q8IWJ2 1684 aa20.46■□□□□ 0.87
TCOF1-206ENST00000445265 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
TCOF1-206ENST00000445265 ADGRL2O95490 1459 aa20.46■□□□□ 0.87
TCOF1-206ENST00000445265 MRE11P49959 708 aa20.46■□□□□ 0.87
TCOF1-206ENST00000445265 LTV1Q96GA3 475 aaPredicted RBP20.46■□□□□ 0.87
TCOF1-206ENST00000445265 HTATSF1O43719 755 aaKnown RBP20.46■□□□□ 0.87
TCOF1-206ENST00000445265 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
TCOF1-206ENST00000445265 BRPF3Q9ULD4 1205 aa20.45■□□□□ 0.86
TCOF1-206ENST00000445265 TRAK2O60296 914 aa20.45■□□□□ 0.86
TCOF1-206ENST00000445265 TESK2Q96S53 571 aa20.45■□□□□ 0.86
TCOF1-206ENST00000445265 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
TCOF1-206ENST00000445265 A0A0G2JS52 829 aa20.44■□□□□ 0.86
TCOF1-206ENST00000445265 TWISTNBQ3B726 338 aaPredicted RBP20.43■□□□□ 0.86
TCOF1-206ENST00000445265 DRC7Q8IY82 874 aa20.43■□□□□ 0.86
TCOF1-206ENST00000445265 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
TCOF1-206ENST00000445265 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
TCOF1-206ENST00000445265 FOXD4L5Q5VV16 416 aaPredicted RBP20.43■□□□□ 0.86
TCOF1-206ENST00000445265 FOXD4L4Q8WXT5 416 aaPredicted RBP20.43■□□□□ 0.86
TCOF1-206ENST00000445265 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 DISP1Q96F81 1524 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 IL27Q8NEV9 243 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 MAGI3Q5TCQ9 1506 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 FCHSD2O94868 740 aa20.42■□□□□ 0.86
TCOF1-206ENST00000445265 ATP6V1DQ9Y5K8 247 aa20.41■□□□□ 0.86
TCOF1-206ENST00000445265 PER1O15534 1290 aaPredicted RBP20.41■□□□□ 0.86
TCOF1-206ENST00000445265 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
TCOF1-206ENST00000445265 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
TCOF1-206ENST00000445265 FKBP5Q13451 457 aaPredicted RBP20.4■□□□□ 0.86
TCOF1-206ENST00000445265 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
TCOF1-206ENST00000445265 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
TCOF1-206ENST00000445265 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.86
TCOF1-206ENST00000445265 ASXL1Q8IXJ9 1541 aa20.39■□□□□ 0.86
TCOF1-206ENST00000445265 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
TCOF1-206ENST00000445265 ABCC11Q96J66 1382 aa20.39■□□□□ 0.85
TCOF1-206ENST00000445265 SYCP2Q9BX26 1530 aa20.39■□□□□ 0.85
TCOF1-206ENST00000445265 CHD1LQ86WJ1 897 aa20.38■□□□□ 0.85
TCOF1-206ENST00000445265 PLCH2O75038 1416 aa20.37■□□□□ 0.85
TCOF1-206ENST00000445265 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
TCOF1-206ENST00000445265 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
TCOF1-206ENST00000445265 RABEP1Q15276 862 aa20.37■□□□□ 0.85
TCOF1-206ENST00000445265 TEFQ10587 303 aa20.37■□□□□ 0.85
TCOF1-206ENST00000445265 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
TCOF1-206ENST00000445265 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
TCOF1-206ENST00000445265 NSD2O96028 1365 aa20.35■□□□□ 0.85
TCOF1-206ENST00000445265 C1orf115Q9H7X2 142 aa20.35■□□□□ 0.85
TCOF1-206ENST00000445265 TMEM57Q8N5G2 664 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 COL17A1Q9UMD9 1497 aaPredicted RBP20.34■□□□□ 0.85
TCOF1-206ENST00000445265 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 MCM4P33991 863 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 FAM43AQ8N2R8 423 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
TCOF1-206ENST00000445265 C14orf93Q9H972 538 aaKnown RBP20.34■□□□□ 0.85
TCOF1-206ENST00000445265 CIZ1Q9ULV3 898 aaPredicted RBP20.34■□□□□ 0.85
TCOF1-206ENST00000445265 RAPGEF3O95398 923 aa20.33■□□□□ 0.85
TCOF1-206ENST00000445265 ZNF692Q9BU19 519 aaPredicted RBP20.33■□□□□ 0.85
TCOF1-206ENST00000445265 HSP90AA2PQ14568 343 aaPredicted RBP20.33■□□□□ 0.84
TCOF1-206ENST00000445265 NOS1P29475 1434 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 GNAI3P08754 354 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 ALDH1L2Q3SY69 923 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 RTEL1-TNFRSF6BF6WH68 1400 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 FANCAO15360 1455 aa20.32■□□□□ 0.84
TCOF1-206ENST00000445265 HSP90AB4PQ58FF6 505 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms