RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 J3QL48 77 aa10.03□□□□□ -0.8
LINC01004-201ENST00000445184 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
LINC01004-201ENST00000445184 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.81
LINC01004-201ENST00000445184 TRIM32Q13049 653 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 MSS51Q4VC12 460 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
LINC01004-201ENST00000445184 HPS1Q92902 700 aa10□□□□□ -0.81
LINC01004-201ENST00000445184 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
LINC01004-201ENST00000445184 FECHP22830 423 aa9.99□□□□□ -0.81
LINC01004-201ENST00000445184 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
LINC01004-201ENST00000445184 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
LINC01004-201ENST00000445184 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
LINC01004-201ENST00000445184 GMPRP36959 345 aa9.97□□□□□ -0.81
LINC01004-201ENST00000445184 GCGRP47871 477 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 HIC1Q14526 733 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 IRF7Q92985 503 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
LINC01004-201ENST00000445184 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
LINC01004-201ENST00000445184 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
LINC01004-201ENST00000445184 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
LINC01004-201ENST00000445184 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
LINC01004-201ENST00000445184 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
LINC01004-201ENST00000445184 MMP16P51512 607 aa9.92□□□□□ -0.82
LINC01004-201ENST00000445184 Q3C1V9 767 aa9.91□□□□□ -0.82
LINC01004-201ENST00000445184 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
LINC01004-201ENST00000445184 WNT7BP56706 349 aa9.88□□□□□ -0.83
LINC01004-201ENST00000445184 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
LINC01004-201ENST00000445184 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
LINC01004-201ENST00000445184 H3BM21 787 aa9.86□□□□□ -0.83
LINC01004-201ENST00000445184 CCDC24Q8N4L8 307 aa9.86□□□□□ -0.83
LINC01004-201ENST00000445184 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
LINC01004-201ENST00000445184 VEGFBP49765 207 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 SKOR1P84550 965 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 NLRP7Q8WX94 980 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 GNPATO15228 680 aa9.84□□□□□ -0.83
LINC01004-201ENST00000445184 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
LINC01004-201ENST00000445184 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
LINC01004-201ENST00000445184 BMP1P13497 986 aa9.83□□□□□ -0.84
LINC01004-201ENST00000445184 SEMA3EO15041 775 aa9.82□□□□□ -0.84
LINC01004-201ENST00000445184 CAPN5O15484 640 aaPredicted RBP9.82□□□□□ -0.84
LINC01004-201ENST00000445184 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
LINC01004-201ENST00000445184 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
LINC01004-201ENST00000445184 SIAH2O43255 324 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
LINC01004-201ENST00000445184 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
LINC01004-201ENST00000445184 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
LINC01004-201ENST00000445184 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
LINC01004-201ENST00000445184 KDM4AO75164 1064 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 GPR37O15354 613 aa9.72□□□□□ -0.85
LINC01004-201ENST00000445184 CD46P15529 392 aa9.72□□□□□ -0.85
LINC01004-201ENST00000445184 JUNDP17535 347 aa9.71□□□□□ -0.86
LINC01004-201ENST00000445184 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
LINC01004-201ENST00000445184 VSIG8P0DPA2 414 aa9.7□□□□□ -0.86
LINC01004-201ENST00000445184 USP46P62068 366 aa9.7□□□□□ -0.86
LINC01004-201ENST00000445184 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
LINC01004-201ENST00000445184 SCARF1Q14162 830 aa9.68□□□□□ -0.86
LINC01004-201ENST00000445184 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
LINC01004-201ENST00000445184 PTCRAQ6ISU1 281 aaPredicted RBP9.67□□□□□ -0.86
LINC01004-201ENST00000445184 HLA-CQ95604 372 aa9.67□□□□□ -0.86
LINC01004-201ENST00000445184 MRPL14Q6P1L8 145 aaKnown RBP9.66□□□□□ -0.86
LINC01004-201ENST00000445184 GSK3AP49840 483 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 SH3BP2P78314 561 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 HOXA2O43364 376 aa9.64□□□□□ -0.87
LINC01004-201ENST00000445184 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
LINC01004-201ENST00000445184 PURBQ96QR8 312 aaKnown RBP9.63□□□□□ -0.87
LINC01004-201ENST00000445184 GDF11O95390 407 aa9.62□□□□□ -0.87
LINC01004-201ENST00000445184 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
LINC01004-201ENST00000445184 SOBPA7XYQ1 873 aa9.61□□□□□ -0.87
LINC01004-201ENST00000445184 RETREG3Q86VR2 466 aa9.61□□□□□ -0.87
LINC01004-201ENST00000445184 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 NNTQ13423 1086 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 MPNDQ8N594 471 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
LINC01004-201ENST00000445184 RASSF7Q02833 373 aa9.59□□□□□ -0.87
LINC01004-201ENST00000445184 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
LINC01004-201ENST00000445184 ADH1CP00326 375 aa9.58□□□□□ -0.88
LINC01004-201ENST00000445184 TIMP2P16035 220 aa9.58□□□□□ -0.88
LINC01004-201ENST00000445184 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
LINC01004-201ENST00000445184 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
LINC01004-201ENST00000445184 VARSP26640 1264 aaKnown RBP9.57□□□□□ -0.88
LINC01004-201ENST00000445184 MAN1A2O60476 641 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 MS4A1P11836 297 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 BAP1Q92560 729 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
LINC01004-201ENST00000445184 PTPRNQ16849 979 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
LINC01004-201ENST00000445184 EVA1BQ9NVM1 165 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms