RNA–Protein interactions for RNA: ENST00000444465.1

LINC00473-201, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 798 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-201ENST00000444465 ACIN1Q9UKV3 1341 aaKnown RBP23.44■■□□□ 1.34
LINC00473-201ENST00000444465 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
LINC00473-201ENST00000444465 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
LINC00473-201ENST00000444465 RGS12O14924 1447 aa23.42■■□□□ 1.34
LINC00473-201ENST00000444465 LRPPRCP42704 1394 aaKnown RBP23.41■■□□□ 1.34
LINC00473-201ENST00000444465 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
LINC00473-201ENST00000444465 IFT172Q9UG01 1749 aa23.41■■□□□ 1.34
LINC00473-201ENST00000444465 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
LINC00473-201ENST00000444465 SIRT1Q96EB6 747 aa23.4■■□□□ 1.34
LINC00473-201ENST00000444465 MYOM2P54296 1465 aa23.4■■□□□ 1.34
LINC00473-201ENST00000444465 PXDNQ92626 1479 aa23.39■■□□□ 1.34
LINC00473-201ENST00000444465 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
LINC00473-201ENST00000444465 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
LINC00473-201ENST00000444465 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
LINC00473-201ENST00000444465 KNDC1Q76NI1 1749 aa23.37■■□□□ 1.33
LINC00473-201ENST00000444465 FOXD1Q16676 465 aa23.36■■□□□ 1.33
LINC00473-201ENST00000444465 TRPC5Q9UL62 973 aaPredicted RBP23.35■■□□□ 1.33
LINC00473-201ENST00000444465 ATRNO75882 1429 aa23.34■■□□□ 1.33
LINC00473-201ENST00000444465 ADAMTS2O95450 1211 aa23.34■■□□□ 1.33
LINC00473-201ENST00000444465 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
LINC00473-201ENST00000444465 USP21Q9UK80 565 aa23.33■■□□□ 1.33
LINC00473-201ENST00000444465 NRXN1Q9ULB1 1477 aa23.32■■□□□ 1.32
LINC00473-201ENST00000444465 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
LINC00473-201ENST00000444465 WAPLQ7Z5K2 1190 aa23.3■■□□□ 1.32
LINC00473-201ENST00000444465 C14orf93Q9H972 538 aaKnown RBP23.3■■□□□ 1.32
LINC00473-201ENST00000444465 YTHDC2Q9H6S0 1430 aaKnown RBP23.3■■□□□ 1.32
LINC00473-201ENST00000444465 FOXO3O43524 673 aa23.29■■□□□ 1.32
LINC00473-201ENST00000444465 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
LINC00473-201ENST00000444465 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
LINC00473-201ENST00000444465 FMN2Q9NZ56 1722 aa23.28■■□□□ 1.32
LINC00473-201ENST00000444465 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
LINC00473-201ENST00000444465 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
LINC00473-201ENST00000444465 TMEM132EQ6IEE7 984 aa23.26■■□□□ 1.31
LINC00473-201ENST00000444465 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
LINC00473-201ENST00000444465 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
LINC00473-201ENST00000444465 STK26Q9P289 416 aa23.25■■□□□ 1.31
LINC00473-201ENST00000444465 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.24■■□□□ 1.31
LINC00473-201ENST00000444465 EP400Q96L91 3159 aa23.24■■□□□ 1.31
LINC00473-201ENST00000444465 SLIT2O94813 1529 aa23.23■■□□□ 1.31
LINC00473-201ENST00000444465 CCDC125Q86Z20 511 aa23.21■■□□□ 1.31
LINC00473-201ENST00000444465 SRCAPQ6ZRS2 3230 aa23.21■■□□□ 1.31
LINC00473-201ENST00000444465 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
LINC00473-201ENST00000444465 GJD4Q96KN9 370 aaPredicted RBP23.2■■□□□ 1.3
LINC00473-201ENST00000444465 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
LINC00473-201ENST00000444465 SBNO1A3KN83 1393 aa23.17■■□□□ 1.3
LINC00473-201ENST00000444465 XPCQ01831 940 aaPredicted RBP23.17■■□□□ 1.3
LINC00473-201ENST00000444465 KRT28Q7Z3Y7 464 aa23.17■■□□□ 1.3
LINC00473-201ENST00000444465 UNC5CLQ8IV45 518 aa23.17■■□□□ 1.3
LINC00473-201ENST00000444465 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
LINC00473-201ENST00000444465 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
LINC00473-201ENST00000444465 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
LINC00473-201ENST00000444465 PSME1Q06323 249 aa23.14■■□□□ 1.29
LINC00473-201ENST00000444465 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
LINC00473-201ENST00000444465 USP32Q8NFA0 1604 aa23.14■■□□□ 1.29
LINC00473-201ENST00000444465 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
LINC00473-201ENST00000444465 ANKARQ7Z5J8 1434 aa23.14■■□□□ 1.29
LINC00473-201ENST00000444465 ADGRB2O60241 1585 aa23.13■■□□□ 1.29
LINC00473-201ENST00000444465 RGPD8O14715 1765 aaPredicted RBP23.12■■□□□ 1.29
LINC00473-201ENST00000444465 ADGRB1O14514 1584 aa23.12■■□□□ 1.29
LINC00473-201ENST00000444465 ONECUT3O60422 494 aaPredicted RBP23.12■■□□□ 1.29
LINC00473-201ENST00000444465 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
LINC00473-201ENST00000444465 GLI3P10071 1580 aa23.11■■□□□ 1.29
LINC00473-201ENST00000444465 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
LINC00473-201ENST00000444465 HRCP23327 699 aa23.09■■□□□ 1.29
LINC00473-201ENST00000444465 PRAM1Q96QH2 718 aa23.09■■□□□ 1.29
LINC00473-201ENST00000444465 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
LINC00473-201ENST00000444465 VPS72Q15906 364 aa23.08■■□□□ 1.29
LINC00473-201ENST00000444465 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
LINC00473-201ENST00000444465 BLMP54132 1417 aaPredicted RBP23.04■■□□□ 1.28
LINC00473-201ENST00000444465 ABCA3Q99758 1704 aa23.04■■□□□ 1.28
LINC00473-201ENST00000444465 ZRANB1Q9UGI0 708 aa23.03■■□□□ 1.28
LINC00473-201ENST00000444465 EIF3AQ14152 1382 aaKnown RBP23.02■■□□□ 1.28
LINC00473-201ENST00000444465 TRPM3Q9HCF6 1732 aaPredicted RBP23.02■■□□□ 1.28
LINC00473-201ENST00000444465 POGKQ9P215 609 aa23.01■■□□□ 1.27
LINC00473-201ENST00000444465 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
LINC00473-201ENST00000444465 BRWD3Q6RI45 1802 aa22.99■■□□□ 1.27
LINC00473-201ENST00000444465 FAM83GA6ND36 823 aa22.99■■□□□ 1.27
LINC00473-201ENST00000444465 CABLES1Q8TDN4 633 aa22.99■■□□□ 1.27
LINC00473-201ENST00000444465 ALS2Q96Q42 1657 aa22.99■■□□□ 1.27
LINC00473-201ENST00000444465 TULP4Q9NRJ4 1543 aa22.98■■□□□ 1.27
LINC00473-201ENST00000444465 SEPT12Q8IYM1 358 aa22.98■■□□□ 1.27
LINC00473-201ENST00000444465 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
LINC00473-201ENST00000444465 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
LINC00473-201ENST00000444465 WASLO00401 505 aaPredicted RBP22.96■■□□□ 1.27
LINC00473-201ENST00000444465 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
LINC00473-201ENST00000444465 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
LINC00473-201ENST00000444465 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
LINC00473-201ENST00000444465 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
LINC00473-201ENST00000444465 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
LINC00473-201ENST00000444465 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
LINC00473-201ENST00000444465 COL14A1Q05707 1796 aaKnown RBP22.91■■□□□ 1.26
LINC00473-201ENST00000444465 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
LINC00473-201ENST00000444465 KRT27Q7Z3Y8 459 aa22.91■■□□□ 1.26
LINC00473-201ENST00000444465 MINK1Q8N4C8 1332 aaPredicted RBP22.89■■□□□ 1.26
LINC00473-201ENST00000444465 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
LINC00473-201ENST00000444465 HIRIP3Q9BW71 556 aaPredicted RBP22.89■■□□□ 1.25
LINC00473-201ENST00000444465 ARHGEF28Q8N1W1 1705 aaKnown RBP22.88■■□□□ 1.25
LINC00473-201ENST00000444465 ATP7BP35670 1465 aa22.87■■□□□ 1.25
LINC00473-201ENST00000444465 BTG4Q9NY30 223 aa22.87■■□□□ 1.25
LINC00473-201ENST00000444465 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms