RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TECPR2O15040 1411 aa17.38■□□□□ 0.37
TTC28-203ENST00000442232 ORAI2Q96SN7 254 aa17.37■□□□□ 0.37
TTC28-203ENST00000442232 C8orf37Q96NL8 207 aa17.36■□□□□ 0.37
TTC28-203ENST00000442232 AFF2P51816 1311 aa17.36■□□□□ 0.37
TTC28-203ENST00000442232 MYOM2P54296 1465 aa17.36■□□□□ 0.37
TTC28-203ENST00000442232 RXRBP28702 533 aa17.35■□□□□ 0.37
TTC28-203ENST00000442232 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
TTC28-203ENST00000442232 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
TTC28-203ENST00000442232 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
TTC28-203ENST00000442232 YTHDC2Q9H6S0 1430 aaKnown RBP17.35■□□□□ 0.37
TTC28-203ENST00000442232 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
TTC28-203ENST00000442232 TMEM132EQ6IEE7 984 aa17.34■□□□□ 0.37
TTC28-203ENST00000442232 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.37
TTC28-203ENST00000442232 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
TTC28-203ENST00000442232 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
TTC28-203ENST00000442232 DHX57Q6P158 1386 aaKnown RBP17.32■□□□□ 0.36
TTC28-203ENST00000442232 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
TTC28-203ENST00000442232 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
TTC28-203ENST00000442232 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
TTC28-203ENST00000442232 ADAMTS2O95450 1211 aa17.31■□□□□ 0.36
TTC28-203ENST00000442232 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
TTC28-203ENST00000442232 NGLY1Q96IV0 654 aa17.3■□□□□ 0.36
TTC28-203ENST00000442232 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
TTC28-203ENST00000442232 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
TTC28-203ENST00000442232 PXDNQ92626 1479 aa17.28■□□□□ 0.36
TTC28-203ENST00000442232 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.36
TTC28-203ENST00000442232 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
TTC28-203ENST00000442232 SIRT1Q96EB6 747 aa17.27■□□□□ 0.36
TTC28-203ENST00000442232 QTRT2Q9H974 415 aaKnown RBP17.27■□□□□ 0.36
TTC28-203ENST00000442232 FOXO3O43524 673 aa17.26■□□□□ 0.35
TTC28-203ENST00000442232 RBM6P78332 1123 aaKnown RBP17.26■□□□□ 0.35
TTC28-203ENST00000442232 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
TTC28-203ENST00000442232 POGKQ9P215 609 aa17.25■□□□□ 0.35
TTC28-203ENST00000442232 DLC1Q96QB1 1528 aa17.25■□□□□ 0.35
TTC28-203ENST00000442232 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
TTC28-203ENST00000442232 HRCP23327 699 aa17.23■□□□□ 0.35
TTC28-203ENST00000442232 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
TTC28-203ENST00000442232 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
TTC28-203ENST00000442232 USP21Q9UK80 565 aa17.23■□□□□ 0.35
TTC28-203ENST00000442232 RGS12O14924 1447 aa17.22■□□□□ 0.35
TTC28-203ENST00000442232 TRPC5Q9UL62 973 aaPredicted RBP17.22■□□□□ 0.35
TTC28-203ENST00000442232 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
TTC28-203ENST00000442232 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
TTC28-203ENST00000442232 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
TTC28-203ENST00000442232 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
TTC28-203ENST00000442232 ADGRB1O14514 1584 aa17.2■□□□□ 0.34
TTC28-203ENST00000442232 PSME1Q06323 249 aa17.2■□□□□ 0.34
TTC28-203ENST00000442232 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
TTC28-203ENST00000442232 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
TTC28-203ENST00000442232 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
TTC28-203ENST00000442232 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
TTC28-203ENST00000442232 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
TTC28-203ENST00000442232 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
TTC28-203ENST00000442232 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
TTC28-203ENST00000442232 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
TTC28-203ENST00000442232 TNS3Q68CZ2 1445 aa17.18■□□□□ 0.34
TTC28-203ENST00000442232 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
TTC28-203ENST00000442232 ATRNO75882 1429 aa17.17■□□□□ 0.34
TTC28-203ENST00000442232 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.17■□□□□ 0.34
TTC28-203ENST00000442232 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
TTC28-203ENST00000442232 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
TTC28-203ENST00000442232 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
TTC28-203ENST00000442232 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
TTC28-203ENST00000442232 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
TTC28-203ENST00000442232 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
TTC28-203ENST00000442232 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
TTC28-203ENST00000442232 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
TTC28-203ENST00000442232 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
TTC28-203ENST00000442232 TULP4Q9NRJ4 1543 aa17.13■□□□□ 0.33
TTC28-203ENST00000442232 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
TTC28-203ENST00000442232 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
TTC28-203ENST00000442232 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
TTC28-203ENST00000442232 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
TTC28-203ENST00000442232 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
TTC28-203ENST00000442232 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
TTC28-203ENST00000442232 BCL9LQ86UU0 1499 aa17.11■□□□□ 0.33
TTC28-203ENST00000442232 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
TTC28-203ENST00000442232 UNC5CLQ8IV45 518 aa17.09■□□□□ 0.33
TTC28-203ENST00000442232 SLIT2O94813 1529 aa17.09■□□□□ 0.33
TTC28-203ENST00000442232 TRPM3Q9HCF6 1732 aaPredicted RBP17.08■□□□□ 0.32
TTC28-203ENST00000442232 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
TTC28-203ENST00000442232 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
TTC28-203ENST00000442232 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
TTC28-203ENST00000442232 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
TTC28-203ENST00000442232 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
TTC28-203ENST00000442232 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
TTC28-203ENST00000442232 GLI3P10071 1580 aa17.04■□□□□ 0.32
TTC28-203ENST00000442232 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
TTC28-203ENST00000442232 PRR36Q9H6K5 1346 aa17.03■□□□□ 0.32
TTC28-203ENST00000442232 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
TTC28-203ENST00000442232 ATP7BP35670 1465 aa17.03■□□□□ 0.32
TTC28-203ENST00000442232 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.32
TTC28-203ENST00000442232 VPS72Q15906 364 aa17.01■□□□□ 0.31
TTC28-203ENST00000442232 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
TTC28-203ENST00000442232 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
TTC28-203ENST00000442232 NUDT16Q96DE0 195 aaKnown RBP17■□□□□ 0.31
TTC28-203ENST00000442232 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
TTC28-203ENST00000442232 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
TTC28-203ENST00000442232 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
TTC28-203ENST00000442232 A0A0G2JS52 829 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms